Guide to the Human Genome
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Name: ARHGEF7 Sequence: fasta or formatted (782aa) NCBI GI: 22027528
Description:

PAK-interacting exchange factor beta isoform b

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [803aa] PAK-interacting exchange factor beta isoform c
alt prot [753aa] PAK-interacting exchange factor beta isoform d
alt prot [646aa] PAK-interacting exchange factor beta isoform a
alt prot [646aa] PAK-interacting exchange factor beta isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         35           2
 C cysteine            2.0         16           2
 D aspartate           4.2         33           3
 E glutamate           7.5         59           2
 F phenylalanine       2.6         20           1
 G glycine             5.0         39           2
 H histidine           2.8         22           2
 I isoleucine          3.6         28           1
 K lysine              6.5         51           2
 L leucine            11.5         90           3
 M methionine          2.3         18           1
 N asparagine          4.6         36           2
 P proline             6.1         48           2
 Q glutamine           4.7         37           2
 R arginine            4.7         37           2
 S serine             11.0         86           2
 T threonine           7.4         58           2
 V valine              4.7         37           2
 W tryptophan          1.3         10           2
 Y tyrosine            2.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PAK-interacting exchange factor beta isoform b [Homo... 
ARHGEF7               0.992   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.952   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.707   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.707   PAK-interacting exchange factor beta isoform a 
ARHGEF6               0.516   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
ARHGEF4               0.071   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.071   Rho guanine nucleotide exchange factor 4 isoform b [...
SPATA13               0.064   spermatogenesis associated 13 
PLEKHG1               0.059   pleckstrin homology domain containing, family G (wit...
ARHGEF9               0.054   Cdc42 guanine exchange factor 9 
ITSN2                 0.052   intersectin 2 isoform 3 
ITSN2                 0.052   intersectin 2 isoform 1 
ITSN1                 0.050   intersectin 1 isoform ITSN-l 
PREX1                 0.048   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
PREX2                 0.046   DEP domain containing 2 isoform b 
PREX2                 0.046   DEP domain containing 2 isoform a 
FARP1                 0.040   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
PLEKHG2               0.039   common-site lymphoma/leukemia guanine nucleotide ex...
FGD4                  0.035   FYVE, RhoGEF and PH domain containing 4 
FARP2                 0.035   FERM, RhoGEF and pleckstrin domain protein 2 
TRIO                  0.035   triple functional domain (PTPRF interacting) 
KALRN                 0.034   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.034   kalirin, RhoGEF kinase isoform 2 
TIAM1                 0.034   T-cell lymphoma invasion and metastasis 1 
TIAM2                 0.034   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM2                 0.034   T-cell lymphoma invasion and metastasis 2 isoform a ...
VAV2                  0.034   vav 2 guanine nucleotide exchange factor isoform 2 [...
DNMBP                 0.032   dynamin binding protein 
PLEKHG3               0.031   pleckstrin homology domain containing, family G, mem...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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