Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PYGO2 Sequence: fasta or formatted (406aa) NCBI GI: 23510333
Description:

pygopus homolog 2

Referenced in:

B cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         34           3
 C cysteine            1.7          7           1
 D aspartate           3.0         12           2
 E glutamate           3.4         14           1
 F phenylalanine       4.7         19           1
 G glycine            15.5         63           5
 H histidine           1.0          4           1
 I isoleucine          1.0          4           1
 K lysine              3.2         13           2
 L leucine             5.2         21           2
 M methionine          3.2         13           2
 N asparagine          3.9         16           1
 P proline            20.4         83           4
 Q glutamine           5.9         24           1
 R arginine            3.2         13           2
 S serine              7.4         30           2
 T threonine           3.4         14           2
 V valine              3.4         14           1
 W tryptophan          0.5          2           1
 Y tyrosine            1.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pygopus homolog 2 
PYGO1                 0.252   pygopus homolog 1 
PRB2                  0.090   proline-rich protein BstNI subfamily 2 
PRB1                  0.080   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SFPQ                  0.076   splicing factor proline/glutamine rich (polypyrimidin...
COL11A2               0.074   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.074   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.074   collagen, type XI, alpha 2 isoform 1 preproprotein ...
NACA                  0.073   nascent polypeptide-associated complex alpha subuni...
PRB3                  0.072   proline-rich protein BstNI subfamily 3 precursor [H...
CPSF6                 0.072   cleavage and polyadenylation specific factor 6, 68 ...
COL8A1                0.072   alpha 1 type VIII collagen precursor 
COL8A1                0.072   alpha 1 type VIII collagen precursor 
COL11A1               0.070   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.070   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.070   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL10A1               0.069   type X collagen alpha 1 precursor 
FMN2                  0.069   formin 2 
COL1A1                0.067   alpha 1 type I collagen preproprotein 
COL5A1                0.067   alpha 1 type V collagen preproprotein 
WIPF1                 0.067   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.067   WAS/WASL interacting protein family, member 1 
COL17A1               0.067   alpha 1 type XVII collagen 
COL3A1                0.067   collagen type III alpha 1 preproprotein 
COL8A2                0.066   collagen, type VIII, alpha 2 
COL16A1               0.066   alpha 1 type XVI collagen precursor 
PTPN23                0.063   protein tyrosine phosphatase, non-receptor type 23 [...
COL4A5                0.062   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.062   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.062   type IV collagen alpha 5 isoform 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press