Guide to the Human Genome
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Search of human proteins with 23308713

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308713 SRY (sex determining region Y)-box 5 isoform a
[Homo sapiens]
         (763 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...  1519   0.0  
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...  1492   0.0  
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...   845   0.0  
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...   843   0.0  
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...   838   0.0  
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...   830   0.0  
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...   754   0.0  
gi|41406089 SRY-box 13 [Homo sapiens]                                 431   e-120
gi|11967991 SRY-box 17 [Homo sapiens]                                 112   2e-24
gi|13899269 SRY-box 7 [Homo sapiens]                                  109   8e-24
gi|4557853 transcription factor SOX9 [Homo sapiens]                   109   8e-24
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]       106   9e-23
gi|4507161 SRY-box 11 [Homo sapiens]                                  105   2e-22
gi|4759162 SRY-box 14 [Homo sapiens]                                  105   2e-22
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]       104   3e-22
gi|8924248 SRY-box 18 [Homo sapiens]                                  103   5e-22
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]      103   8e-22
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]        102   1e-21
gi|5902108 SRY-box 21 [Homo sapiens]                                  102   1e-21
gi|28195386 sex-determining region Y-box 2 [Homo sapiens]             101   2e-21
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]       100   7e-21
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]        99   1e-20
gi|4507225 sex determining region Y [Homo sapiens]                     98   3e-20
gi|5902106 SRY-box 15 [Homo sapiens]                                   98   3e-20
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    82   2e-15
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    82   2e-15
gi|112421108 capicua homolog [Homo sapiens]                            72   3e-12
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    64   5e-10
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ...    63   9e-10
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]    61   4e-09

>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 1519 bits (3932), Expect = 0.0
 Identities = 763/763 (100%), Positives = 763/763 (100%)

Query: 1   MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN 60
           MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
Sbjct: 1   MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN 60

Query: 61  KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS 120
           KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
Sbjct: 61  KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS 120

Query: 121 GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM 180
           GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
Sbjct: 121 GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM 180

Query: 181 GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL 240
           GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
Sbjct: 181 GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL 240

Query: 241 AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL 300
           AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
Sbjct: 241 AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL 300

Query: 301 PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI 360
           PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
Sbjct: 301 PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI 360

Query: 361 PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL 420
           PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
Sbjct: 361 PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL 420

Query: 421 RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK 480
           RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
Sbjct: 421 RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK 480

Query: 481 VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES 540
           VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES
Sbjct: 481 VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES 540

Query: 541 RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL 600
           RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
Sbjct: 541 RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL 600

Query: 601 EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF 660
           EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
Sbjct: 601 EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF 660

Query: 661 NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP 720
           NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
Sbjct: 661 NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP 720

Query: 721 HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN 763
           HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
Sbjct: 721 HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN 763


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 1492 bits (3862), Expect = 0.0
 Identities = 750/750 (100%), Positives = 750/750 (100%)

Query: 14  MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL 73
           MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL
Sbjct: 1   MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL 60

Query: 74  TQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPE 133
           TQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPE
Sbjct: 61  TQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPE 120

Query: 134 RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE 193
           RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
Sbjct: 121 RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE 180

Query: 194 SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ 253
           SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
Sbjct: 181 SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ 240

Query: 254 QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDP 313
           QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDP
Sbjct: 241 QLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDP 300

Query: 314 YPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTS 373
           YPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTS
Sbjct: 301 YPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTS 360

Query: 374 IHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASV 433
           IHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASV
Sbjct: 361 IHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASV 420

Query: 434 PAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCR 493
           PAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCR
Sbjct: 421 PAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCR 480

Query: 494 TEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNE 553
           TEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNE
Sbjct: 481 TEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNE 540

Query: 554 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS 613
           PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS
Sbjct: 541 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLS 600

Query: 614 KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATA 673
           KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATA
Sbjct: 601 KQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATA 660

Query: 674 GVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDING 733
           GVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDING
Sbjct: 661 GVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDING 720

Query: 734 EIYDEYDEEEDDPDVDYGSDSENHIAGQAN 763
           EIYDEYDEEEDDPDVDYGSDSENHIAGQAN
Sbjct: 721 EIYDEYDEEEDDPDVDYGSDSENHIAGQAN 750


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score =  845 bits (2184), Expect = 0.0
 Identities = 482/812 (59%), Positives = 572/812 (70%), Gaps = 71/812 (8%)

Query: 13  RMSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQ 68
           RMSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE  
Sbjct: 3   RMSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELP 60

Query: 69  PVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTA 128
            +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S  
Sbjct: 61  TLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVT 119

Query: 129 LGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GE 187
            GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GE
Sbjct: 120 FGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGE 179

Query: 188 IKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQ 247
           IKGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQ
Sbjct: 180 IKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQ 239

Query: 248 IARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFS 305
           IARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +
Sbjct: 240 IARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGIT 299

Query: 306 YKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQG-N 364
           YK G  D YPVQ IP+TMAAAAA+  GL PLQLQQLYAAQLA+MQVSPG K+P  PQ  N
Sbjct: 300 YKPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPN 355

Query: 365 LGAAVSPTSIHTDKSTNSPPPKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRI 422
               VSPT I  +K   SP  + KDE A QPLNLS++PKT++  KSPTSPT    PA + 
Sbjct: 356 TAGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKT 415

Query: 423 NSGAGPLKASVPAALASPSARVSTIG-----------------------YLNDHDAVTKA 459
           +    P K+S+P+ +     R S++G                          D D V KA
Sbjct: 416 SPVNLPNKSSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDTVMKA 475

Query: 460 IQEARQMKEQLRREQQV-----LDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNE 514
           IQEAR+M+EQ++REQQ      +DGK++ +N++GLN+CR EKE+T  E+L  QL  K NE
Sbjct: 476 IQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNE 535

Query: 515 EGKFSHAMMDFNLSGDSDGS--------------------AGVSESRIYRESRGRGSNEP 554
           +GK    ++D     D++GS                    A V+E+R+YR++RGR S+EP
Sbjct: 536 DGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEP 595

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEEQARLSK
Sbjct: 596 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 655

Query: 615 QHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIAT-A 673
            HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QIPI T  
Sbjct: 656 IHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT 715

Query: 674 GVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDIN 732
           GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +      E IN
Sbjct: 716 GVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN---EMIN 772

Query: 733 GEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763
           GE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 773 GEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 804


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score =  843 bits (2179), Expect = 0.0
 Identities = 481/811 (59%), Positives = 571/811 (70%), Gaps = 71/811 (8%)

Query: 14  MSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQP 69
           MSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE   
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELPT 58

Query: 70  VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 129
           +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S   
Sbjct: 59  LVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVTF 117

Query: 130 GTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GEI 188
           GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GEI
Sbjct: 118 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 177

Query: 189 KGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQI 248
           KGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQI
Sbjct: 178 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 237

Query: 249 ARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFSY 306
           ARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +Y
Sbjct: 238 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 297

Query: 307 KAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQG-NL 365
           K G  D YPVQ IP+TMAAAAA+  GL PLQLQQLYAAQLA+MQVSPG K+P  PQ  N 
Sbjct: 298 KPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNT 353

Query: 366 GAAVSPTSIHTDKSTNSPPPKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRIN 423
              VSPT I  +K   SP  + KDE A QPLNLS++PKT++  KSPTSPT    PA + +
Sbjct: 354 AGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTS 413

Query: 424 SGAGPLKASVPAALASPSARVSTIG-----------------------YLNDHDAVTKAI 460
               P K+S+P+ +     R S++G                          D D V KAI
Sbjct: 414 PVNLPNKSSIPSPIGGSLGRGSSLGKWKSQHQEETYELDILSSLNSPALFGDQDTVMKAI 473

Query: 461 QEARQMKEQLRREQQV-----LDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEE 515
           QEAR+M+EQ++REQQ      +DGK++ +N++GLN+CR EKE+T  E+L  QL  K NE+
Sbjct: 474 QEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNED 533

Query: 516 GKFSHAMMDFNLSGDSDGS--------------------AGVSESRIYRESRGRGSNEPH 555
           GK    ++D     D++GS                    A V+E+R+YR++RGR S+EPH
Sbjct: 534 GKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPH 593

Query: 556 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 615
           IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEEQARLSK 
Sbjct: 594 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 653

Query: 616 HLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIAT-AG 674
           HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QIPI T  G
Sbjct: 654 HLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTG 713

Query: 675 VVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDING 733
           VVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +      E ING
Sbjct: 714 VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN---EMING 770

Query: 734 EIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763
           E   E YD+ EDDP  DY S++E   A  AN
Sbjct: 771 EDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 801


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score =  838 bits (2166), Expect = 0.0
 Identities = 480/818 (58%), Positives = 571/818 (69%), Gaps = 78/818 (9%)

Query: 14  MSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQP 69
           MSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE   
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELPT 58

Query: 70  VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 129
           +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S   
Sbjct: 59  LVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVTF 117

Query: 130 GTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GEI 188
           GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GEI
Sbjct: 118 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 177

Query: 189 KGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQI 248
           KGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQI
Sbjct: 178 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 237

Query: 249 ARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFSY 306
           ARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +Y
Sbjct: 238 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 297

Query: 307 KAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ--------------------------- 339
           K G  D YPVQ IP+TMAAAAA+  GL PLQLQ                           
Sbjct: 298 KPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTF 353

Query: 340 --------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSPP 384
                         QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP 
Sbjct: 354 EHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPV 413

Query: 385 PKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSA 442
            + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     
Sbjct: 414 TQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLG 473

Query: 443 RVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLG 488
           R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++G
Sbjct: 474 RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMG 533

Query: 489 LNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRG 548
           LN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++G A V+E+R+YR++RG
Sbjct: 534 LNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARG 593

Query: 549 RGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEE 608
           R S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK+M+N EKQPYYEE
Sbjct: 594 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 653

Query: 609 QARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQI 668
           QARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RRQEMRQ+F VGQQ QI
Sbjct: 654 QARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQI 713

Query: 669 PIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEI 726
           PI T  GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQSTYG+K +   +    
Sbjct: 714 PITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGN- 772

Query: 727 QAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763
             E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 773 --EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score =  830 bits (2144), Expect = 0.0
 Identities = 482/839 (57%), Positives = 573/839 (68%), Gaps = 98/839 (11%)

Query: 13  RMSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQ 68
           RMSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE  
Sbjct: 13  RMSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELP 70

Query: 69  PVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTA 128
            +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S  
Sbjct: 71  TLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVT 129

Query: 129 LGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GE 187
            GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GE
Sbjct: 130 FGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGE 189

Query: 188 IKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQ 247
           IKGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQ
Sbjct: 190 IKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQ 249

Query: 248 IARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFS 305
           IARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +
Sbjct: 250 IARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGIT 309

Query: 306 YKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ-------------------------- 339
           YK G  D YPVQ IP+TMAAAAA+  GL PLQLQ                          
Sbjct: 310 YKPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDT 365

Query: 340 ---------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSP 383
                          QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP
Sbjct: 366 FEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSP 425

Query: 384 PPKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPS 441
             + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +    
Sbjct: 426 VTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSL 485

Query: 442 ARVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSL 487
            R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++
Sbjct: 486 GRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNM 545

Query: 488 GLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGS------------- 534
           GLN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++GS             
Sbjct: 546 GLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQY 605

Query: 535 -------AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS 587
                  A V+E+R+YR++RGR S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS
Sbjct: 606 YCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS 665

Query: 588 KILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKA 647
           KILGSRWK+M+N EKQPYYEEQARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK 
Sbjct: 666 KILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQ 725

Query: 648 IMRNRRQEMRQYFNVGQQAQIPIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPG 705
           +MR+RRQEMRQ+F VGQQ QIPI T  GVVYPGAI MA   PSP + S+ SS S+SPEP 
Sbjct: 726 LMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPS 785

Query: 706 MPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763
           +PVIQSTYG+K +   +      E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 786 LPVIQSTYGMKTDGGSLAGN---EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score =  754 bits (1948), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)

Query: 389 DEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIG 448
           DEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIG
Sbjct: 3   DEVAQPLNLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIG 62

Query: 449 YLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQL 508
           YLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQL
Sbjct: 63  YLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQL 122

Query: 509 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 568
           AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK
Sbjct: 123 AVKQNEEGKFSHAMMDFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAK 182

Query: 569 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPR 628
           DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPR
Sbjct: 183 DERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPR 242

Query: 629 PKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPS 688
           PKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPS
Sbjct: 243 PKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPS 302

Query: 689 PHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDV 748
           PHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDV
Sbjct: 303 PHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDV 362

Query: 749 DYGSDSENHIAGQAN 763
           DYGSDSENHIAGQAN
Sbjct: 363 DYGSDSENHIAGQAN 377


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score =  431 bits (1107), Expect = e-120
 Identities = 285/641 (44%), Positives = 365/641 (56%), Gaps = 95/641 (14%)

Query: 107 STSPQKAEEGG-RQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSI 165
           S  PQ   +G  R S +  S    G+PE ++  +++     +++   +  +N  E  P+I
Sbjct: 58  SADPQAPAQGNFRGSWDCSSPEGNGSPEPKRPGVSEAASGSQEKL--DFNRNLKEVVPAI 115

Query: 166 EKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKK 225
           EKLLS DWK++ L   S    ++KGT ESLAEKE QL+ MI+QL++LR+QLL AH EQK 
Sbjct: 116 EKLLSSDWKERFLGRNSMEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKN 175

Query: 226 LAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPP 285
           +AA   EKQ+QQMELA+QQQEQIA+QQQQL+QQQHKINLLQQQIQ Q  +P +MIP FPP
Sbjct: 176 MAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQ-QVNMPYVMIPAFPP 234

Query: 286 DQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQ 345
             + L         LP              +Q IP              P++    Y  Q
Sbjct: 235 SHQPLPVTPDSQLALP--------------IQPIPCK------------PVE----YPLQ 264

Query: 346 LAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSD 405
           L     +P  K PG                   +T+ P      E +QPLNL+AKPK   
Sbjct: 265 LLHSPPAPVVKRPGA-----------------MATHHP----LQEPSQPLNLTAKPK--- 300

Query: 406 GKSPTSPTSPHMPALRINSGAG-PLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEAR 464
             +P  P +   P+L+++S    P     P      S     +G+L + DAVTKAIQ+AR
Sbjct: 301 --APELPNTSSSPSLKMSSCVPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDAR 358

Query: 465 QMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMD 524
           Q+   L      LDG           N    K+  +L+S       K+  E    H + +
Sbjct: 359 QL---LHSHSGALDGSP---------NTPFRKDLISLDSSP----AKERLEDGCVHPLEE 402

Query: 525 FNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNS 584
             LS D DGS    ESR          N  HIKRPMNAFMVWAKDERRKILQAFPDMHNS
Sbjct: 403 AMLSCDMDGSRHFPESR----------NSSHIKRPMNAFMVWAKDERRKILQAFPDMHNS 452

Query: 585 NISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGE 644
           +ISKILGSRWK+MTN EKQPYYEEQARLS+QHLEKYPDYKYKPRPKRTC+V+GK+LR+GE
Sbjct: 453 SISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGE 512

Query: 645 YKAIMRNRRQEMRQYFNVGQQA-QIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPE 703
           YKA+MR RRQ+ RQ + +  QA Q+ ++++ V+YP A   AGMP      EH  V  S +
Sbjct: 513 YKALMRTRRQDARQSYVIPPQAGQVQMSSSDVLYPRA---AGMPLAQPLVEH-YVPRSLD 568

Query: 704 PGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEED 744
           P MPVI +T  ++ E     +     D  GE+Y  Y E+ED
Sbjct: 569 PNMPVIVNTCSLREEGEGTDDRHSVAD--GEMY-RYSEDED 606


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score =  112 bits (279), Expect = 2e-24
 Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 5/108 (4%)

Query: 524 DFNLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHN 583
           D  + G++  ++G         + GR   E  I+RPMNAFMVWAKDER+++ Q  PD+HN
Sbjct: 41  DMKVKGEAPANSGAPAG-----AAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHN 95

Query: 584 SNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKR 631
           + +SK+LG  WKA+T  EK+P+ EE  RL  QH++ +P+YKY+PR ++
Sbjct: 96  AELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRK 143


>gi|13899269 SRY-box 7 [Homo sapiens]
          Length = 388

 Score =  109 bits (273), Expect = 8e-24
 Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 530 DSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589
           D++ S G S   + R    +GS E  I+RPMNAFMVWAKDER+++    PD+HN+ +SK+
Sbjct: 20  DAELSDGQSPPAVPRPPGDKGS-ESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKM 78

Query: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKR 631
           LG  WKA+T  +K+PY +E  RL  QH++ YP+YKY+PR K+
Sbjct: 79  LGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score =  109 bits (273), Expect = 8e-24
 Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 18/165 (10%)

Query: 548 GRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYE 607
           G   N+PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ +   EK+P+ E
Sbjct: 97  GSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVE 156

Query: 608 EQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQ 667
           E  RL  QH + +PDYKY+PR +       K ++ G+ +A      +E  +  ++   A 
Sbjct: 157 EAERLRVQHKKDHPDYKYQPRRR-------KSVKNGQAEA------EEATEQTHISPNAI 203

Query: 668 IPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQST 712
                A   +    + +GM   H P EHS  S  P P  P    T
Sbjct: 204 FKALQADSPH----SSSGMSEVHSPGEHSGQSQGP-PTPPTTPKT 243


>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
          Length = 391

 Score =  106 bits (264), Expect = 9e-23
 Identities = 51/114 (44%), Positives = 70/114 (61%)

Query: 526 NLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSN 585
           NLSG +    G           G  +N+  +KRPMNAFMVW++ +RRK+ Q  P MHNS 
Sbjct: 21  NLSGPAGAGGGGGGGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSE 80

Query: 586 ISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKK 639
           ISK LG+ WK M+  EK+P+ +E  RL   H++++PDYKY+PR K   L+   K
Sbjct: 81  ISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK 134


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score =  105 bits (262), Expect = 2e-22
 Identities = 47/76 (61%), Positives = 57/76 (75%)

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           HIKRPMNAFMVW+K ERRKI++  PDMHN+ ISK LG RWK + + EK P+  E  RL  
Sbjct: 48  HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 107

Query: 615 QHLEKYPDYKYKPRPK 630
           +H+  YPDYKY+PR K
Sbjct: 108 KHMADYPDYKYRPRKK 123


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score =  105 bits (261), Expect = 2e-22
 Identities = 45/76 (59%), Positives = 59/76 (77%)

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           HIKRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK ++  EK+PY +E  RL  
Sbjct: 7   HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA 66

Query: 615 QHLEKYPDYKYKPRPK 630
           QH++++PDYKY+PR K
Sbjct: 67  QHMKEHPDYKYRPRRK 82


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score =  104 bits (260), Expect = 3e-22
 Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 3/114 (2%)

Query: 526 NLSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSN 585
           N +G ++   G S         G G+++  +KRPMNAFMVW++ +RRK+    P MHNS 
Sbjct: 112 NAAGGANSGGGSSGGA---SGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSE 168

Query: 586 ISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKK 639
           ISK LG+ WK +T+ EK+P+ +E  RL   H+++YPDYKY+PR K   L+   K
Sbjct: 169 ISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDK 222


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score =  103 bits (258), Expect = 5e-22
 Identities = 47/88 (53%), Positives = 64/88 (72%), Gaps = 4/88 (4%)

Query: 548 GRG----SNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQ 603
           GRG    ++E  I+RPMNAFMVWAKDER+++ Q  PD+HN+ +SK+LG  WK +   EK+
Sbjct: 73  GRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKR 132

Query: 604 PYYEEQARLSKQHLEKYPDYKYKPRPKR 631
           P+ EE  RL  QHL  +P+YKY+PR K+
Sbjct: 133 PFVEEAERLRVQHLRDHPNYKYRPRRKK 160


>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
          Length = 315

 Score =  103 bits (256), Expect = 8e-22
 Identities = 45/76 (59%), Positives = 57/76 (75%)

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           HIKRPMNAFMVW++ ERRKI+  +PDMHN+ ISK LG RW+ + + EK P+  E  RL  
Sbjct: 39  HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 98

Query: 615 QHLEKYPDYKYKPRPK 630
           +H+  YPDYKY+PR K
Sbjct: 99  KHMADYPDYKYRPRKK 114


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score =  102 bits (255), Expect = 1e-21
 Identities = 45/76 (59%), Positives = 57/76 (75%)

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           HIKRPMNAFMVW++ ERRKI++  PDMHN+ ISK LG RWK + + +K P+  E  RL  
Sbjct: 58  HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRL 117

Query: 615 QHLEKYPDYKYKPRPK 630
           +H+  YPDYKY+PR K
Sbjct: 118 KHMADYPDYKYRPRKK 133


>gi|5902108 SRY-box 21 [Homo sapiens]
          Length = 276

 Score =  102 bits (255), Expect = 1e-21
 Identities = 45/85 (52%), Positives = 61/85 (71%)

Query: 555 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSK 614
           H+KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK +T  EK+P+ +E  RL  
Sbjct: 7   HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRA 66

Query: 615 QHLEKYPDYKYKPRPKRTCLVDGKK 639
            H++++PDYKY+PR K   L+   K
Sbjct: 67  MHMKEHPDYKYRPRRKPKTLLKKDK 91


>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
          Length = 317

 Score =  101 bits (252), Expect = 2e-21
 Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 3/121 (2%)

Query: 522 MMDFNLS--GDSDGSAGVSESRIYRESRGRGSNEP-HIKRPMNAFMVWAKDERRKILQAF 578
           MM+  L   G    S G   +     + G   N P  +KRPMNAFMVW++ +RRK+ Q  
Sbjct: 4   MMETELKPPGPQQTSGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN 63

Query: 579 PDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGK 638
           P MHNS ISK LG+ WK ++  EK+P+ +E  RL   H++++PDYKY+PR K   L+   
Sbjct: 64  PKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD 123

Query: 639 K 639
           K
Sbjct: 124 K 124


>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
          Length = 466

 Score =  100 bits (248), Expect = 7e-21
 Identities = 40/84 (47%), Positives = 59/84 (70%)

Query: 548 GRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYE 607
           G   ++PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ +   +K+P+ E
Sbjct: 96  GASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 155

Query: 608 EQARLSKQHLEKYPDYKYKPRPKR 631
           E  RL  QH + +PDYKY+PR ++
Sbjct: 156 EAERLRMQHKKDHPDYKYQPRRRK 179


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score = 99.4 bits (246), Expect = 1e-20
 Identities = 40/80 (50%), Positives = 59/80 (73%)

Query: 553 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARL 612
           +PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ ++  EK+P+ EE  RL
Sbjct: 99  KPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERL 158

Query: 613 SKQHLEKYPDYKYKPRPKRT 632
             QH + +PDYKY+PR +++
Sbjct: 159 RVQHKKDHPDYKYQPRRRKS 178


>gi|4507225 sex determining region Y [Homo sapiens]
          Length = 204

 Score = 98.2 bits (243), Expect = 3e-20
 Identities = 43/86 (50%), Positives = 60/86 (69%)

Query: 549 RGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEE 608
           +G+ +  +KRPMNAF+VW++D+RRK+    P M NS ISK LG +WK +T  EK P+++E
Sbjct: 53  KGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQE 112

Query: 609 QARLSKQHLEKYPDYKYKPRPKRTCL 634
             +L   H EKYP+YKY+PR K   L
Sbjct: 113 AQKLQAMHREKYPNYKYRPRRKAKML 138


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 7/104 (6%)

Query: 534 SAGVSESRIYRESRGRGSNEP-------HIKRPMNAFMVWAKDERRKILQAFPDMHNSNI 586
           +A  S S   +E  G GS           +KRPMNAFMVW+  +RR++ Q  P MHNS I
Sbjct: 20  TAAASSSSGPQEREGAGSPAAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEI 79

Query: 587 SKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPK 630
           SK LG++WK +   EK+P+ EE  RL  +HL  YPDYKY+PR K
Sbjct: 80  SKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRK 123


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 6/95 (6%)

Query: 535 AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW 594
           AG+ ++   ++  G      H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W
Sbjct: 322 AGIPDTPFSKDRNG------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEW 375

Query: 595 KAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP 629
             ++  +K+PYY+E  ++ ++H E++P + Y+PRP
Sbjct: 376 NKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP 410


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 6/95 (6%)

Query: 535 AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRW 594
           AG+ ++   ++  G      H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W
Sbjct: 322 AGIPDTPFSKDRNG------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEW 375

Query: 595 KAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP 629
             ++  +K+PYY+E  ++ ++H E++P + Y+PRP
Sbjct: 376 NKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP 410


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 545 ESRGRGSNE---PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLE 601
           E  GR  N+    HI+RPMNAFM+++K  R  + Q  P+  N  +SKILG  W A+   E
Sbjct: 186 EKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKE 245

Query: 602 KQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQ 658
           KQ Y++   ++ + H + +PD+K+  + ++    + K   +G        R + M +
Sbjct: 246 KQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSMSE 302


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 63.9 bits (154), Expect = 5e-10
 Identities = 98/394 (24%), Positives = 158/394 (40%), Gaps = 84/394 (21%)

Query: 70   VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 129
            V++L Q+  G   P   H  + +  ++V+SS         PQ A++G    G  L +   
Sbjct: 3807 VAVLQQQHPGALGPQGPHRQVLMTQSRVLSS---------PQLAQQGQGLMGHRLVTAQQ 3857

Query: 130  GTPERR---KGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFG 186
               +++   +GS+A +   L+Q                   L+S   + KL A   G+  
Sbjct: 3858 QQQQQQHQQQGSMAGL-SHLQQ------------------SLMSHSGQPKLSAQPMGSLQ 3898

Query: 187  EIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQE 246
            +++         ++Q +    QL   ++Q L    +Q++L   Q+++Q+QQ +L +QQQ+
Sbjct: 3899 QLQ---------QQQQLQQQQQLQQQQQQQL---QQQQQLQQQQLQQQQQQQQLQQQQQQ 3946

Query: 247  QIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAA---AAQQGFLLPPG 303
            Q+ +QQQQL QQQ +     QQ Q Q Q+  L         RTL +     QQ   L PG
Sbjct: 3947 QLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLL------NQSRTLLSPQQQQQQQVALGPG 4000

Query: 304  FSYKAGCSDPYPVQLIPTTM-----------AAAAAATPGL-----GPLQLQQLYAAQLA 347
               K       P  L PT +           A ++ AT G      GPL +         
Sbjct: 4001 MPAKPLQHFSSPGALGPTLLLTGKEQNTVDPAVSSEATEGPSTHQGGPLAI----GTTPE 4056

Query: 348  AMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGK 407
            +M   PG   P +   +    V P            P  S  ++  PL L  + +     
Sbjct: 4057 SMATEPGEVKPSLSGDSQLLLVQP---------QPQPQPSSLQLQPPLRLPGQQQQQVSL 4107

Query: 408  SPTSPTSPHMPALRINSGAGPLKASVPAALASPS 441
              T+    H    ++ SG+    +SVP  LA PS
Sbjct: 4108 LHTAGGGSHG---QLGSGSSSEASSVPHLLAQPS 4138



 Score = 36.6 bits (83), Expect = 0.090
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 222  EQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQ-QQIQVQGQLPPLMI 280
            + + L   Q++ Q+Q+M+LA++ Q+    QQQQ  QQQH +  +  QQ Q QG       
Sbjct: 3712 DSRLLQERQLQLQQQRMQLAQKLQQ----QQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQ 3767

Query: 281  PVFPPDQRTLAAAAQQGFLL 300
             + P  Q  +  ++ QG L+
Sbjct: 3768 ALGPKPQGLMPPSSHQGLLV 3787



 Score = 35.4 bits (80), Expect = 0.20
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 2/137 (1%)

Query: 276 PPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGP 335
           PP   P+ PP + +  +   +   L P F        P    L P   A+  +  P   P
Sbjct: 575 PPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSP 634

Query: 336 LQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPL 395
           +      +      +VS    LP + + +     SP S   ++S  SPPP++      P 
Sbjct: 635 MSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPE 694

Query: 396 NLSAKPKTSDGKSPTSP 412
           +    P   D  SP SP
Sbjct: 695 DSPTSPPPED--SPASP 709



 Score = 33.9 bits (76), Expect = 0.58
 Identities = 51/188 (27%), Positives = 71/188 (37%), Gaps = 31/188 (16%)

Query: 200  RQLMGMINQLTSLREQLLAAHDEQKKLAASQI----------EKQRQQMELAKQQQEQIA 249
            +QL+ M  QL  L EQ+      +K L A Q           E   ++++L  +QQ +I 
Sbjct: 3518 QQLLQM--QLKVLEEQIGVHRKSRKALCAKQRTAKKAGREFPEADAEKLKLVTEQQSKIQ 3575

Query: 250  RQQQQLLQQQHK-INLL---------QQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFL 299
            +Q  Q+ +QQ +  NL+         QQQ Q Q Q     +    P Q         G L
Sbjct: 3576 KQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQHSAVLALSPSQSPRLLTKLPGQL 3635

Query: 300  LP-PGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPL-------QLQQLYAAQLAAMQV 351
            LP  G     G        L  T    A    PG GP        Q QQ ++    ++  
Sbjct: 3636 LPGHGLQPPQGPPGGQAGGLRLTPGGMALPGQPG-GPFLNTALAQQQQQQHSGGAGSLAG 3694

Query: 352  SPGGKLPG 359
              GG  PG
Sbjct: 3695 PSGGFFPG 3702



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 48/184 (26%), Positives = 68/184 (36%), Gaps = 48/184 (26%)

Query: 277  PLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPL 336
            P  +P+ P  + +L+       L+PP         DP P  L P      AAA P L P 
Sbjct: 912  PEELPLSPSGEPSLSPQ-----LMPP---------DPLPPPLSP---IITAAAPPALSP- 953

Query: 337  QLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSK---DEVAQ 393
                     L  ++   G K    P+  L A +  T I       SPPP++     E   
Sbjct: 954  ---------LGELEYPFGAKGDSDPESPLAAPILETPI-------SPPPEANCTDPEPVP 997

Query: 394  PLNLSAKPKTSDGKSPTSP---------TSPHMPALRINSGAGPLKASVPAALASPSARV 444
            P+ L   P +  G  P SP          SP +    +   + P + S PA   S  + +
Sbjct: 998  PMILPPSPGSPVG--PASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPSPL 1055

Query: 445  STIG 448
            S IG
Sbjct: 1056 SPIG 1059



 Score = 30.4 bits (67), Expect = 6.4
 Identities = 41/169 (24%), Positives = 55/169 (32%), Gaps = 22/169 (13%)

Query: 248  IARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYK 307
            + +QQQQL QQQ        +  +  + P    P           A     L  PG    
Sbjct: 2810 LQQQQQQLWQQQQATAATSMRFAMSARFPSTPGPELGRQALGSPLAGISTRLPGPGEPVP 2869

Query: 308  AGCSDPYPVQL---IPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGIPQGN 364
                    ++L   +   +       PG GP Q  + Y       +++        P+G 
Sbjct: 2870 GPAGPAQFIELRHNVQKGLGPGGTPFPGQGPPQRPRFYPVSEDPHRLA--------PEGL 2921

Query: 365  LGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPT 413
             G AVS            PP K     A  LN S  P T   K PT PT
Sbjct: 2922 RGLAVS----------GLPPQKPSAPPAPELNNSLHP-TPHTKGPTLPT 2959



 Score = 30.4 bits (67), Expect = 6.4
 Identities = 17/56 (30%), Positives = 29/56 (51%)

Query: 192  PESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQ 247
            PE+ AEK + +    +++    +Q+     E   L A    KQ+QQ +  +QQQ+Q
Sbjct: 3557 PEADAEKLKLVTEQQSKIQKQLDQVRKQQKEHTNLMAEYRNKQQQQQQQQQQQQQQ 3612


>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
           sapiens]
          Length = 386

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 16/139 (11%)

Query: 543 YRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEK 602
           + + + +    PHIK+P+NAFM++ K+ R  ++       ++ I++ILG RW A++  E+
Sbjct: 258 HEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQ 317

Query: 603 QPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNV 662
             YYE   +  + H++ YP +  +          GKK          + +R+++++  + 
Sbjct: 318 AKYYELARKERQLHMQLYPGWSARDN-------YGKK---------KKRKREKLQESASG 361

Query: 663 GQQAQIPIATAGVVYPGAI 681
           G+++  P   A    PG +
Sbjct: 362 GKRSSFPTCKAKAATPGPL 380


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 531 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 324 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 383

Query: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 623
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 384 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 417


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.127    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,252,667
Number of Sequences: 37866
Number of extensions: 1695100
Number of successful extensions: 16226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 552
Number of HSP's that attempted gapping in prelim test: 9514
Number of HSP's gapped (non-prelim): 3841
length of query: 763
length of database: 18,247,518
effective HSP length: 110
effective length of query: 653
effective length of database: 14,082,258
effective search space: 9195714474
effective search space used: 9195714474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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