BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapiens] (681 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 1383 0.0 gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 1383 0.0 gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo sapi... 682 0.0 gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] 338 1e-92 gi|219842340 growth arrest-specific 2 [Homo sapiens] 170 3e-42 gi|29540559 growth arrest-specific 2 [Homo sapiens] 170 3e-42 gi|4885253 growth arrest-specific 2 [Homo sapiens] 170 3e-42 gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 166 7e-41 gi|33188445 microfilament and actin filament cross-linker protei... 88 2e-17 gi|33188443 microfilament and actin filament cross-linker protei... 82 2e-15 gi|221316624 dystonin isoform 4 [Homo sapiens] 72 1e-12 gi|221316622 dystonin isoform 3 [Homo sapiens] 72 1e-12 gi|221316618 dystonin isoform 2 [Homo sapiens] 72 1e-12 gi|34577047 dystonin isoform 1 [Homo sapiens] 72 1e-12 gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 72 1e-12 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 69 1e-11 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 66 9e-11 gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 65 3e-10 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 65 3e-10 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 62 1e-09 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 62 1e-09 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 62 1e-09 gi|163965366 nascent polypeptide-associated complex alpha subuni... 62 2e-09 gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 62 2e-09 gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 62 2e-09 gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 62 2e-09 gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 62 2e-09 gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 60 9e-09 gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 60 9e-09 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 2e-08 >gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapiens] Length = 681 Score = 1383 bits (3580), Expect = 0.0 Identities = 681/681 (100%), Positives = 681/681 (100%) Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS 360 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS 360 Query: 361 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG 420 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG Sbjct: 361 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG 420 Query: 421 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP 480 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP Sbjct: 421 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP 480 Query: 481 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP 540 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP Sbjct: 481 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP 540 Query: 541 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS 600 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS Sbjct: 541 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS 600 Query: 601 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA Sbjct: 601 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 Query: 661 ELGTWHALHSVTPRAEPDSWM 681 ELGTWHALHSVTPRAEPDSWM Sbjct: 661 ELGTWHALHSVTPRAEPDSWM 681 >gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapiens] Length = 681 Score = 1383 bits (3580), Expect = 0.0 Identities = 681/681 (100%), Positives = 681/681 (100%) Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS 360 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSAS 360 Query: 361 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG 420 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG Sbjct: 361 SAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGG 420 Query: 421 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP 480 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP Sbjct: 421 RGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSP 480 Query: 481 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP 540 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP Sbjct: 481 AAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP 540 Query: 541 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS 600 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS Sbjct: 541 TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSS 600 Query: 601 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA Sbjct: 601 SSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 Query: 661 ELGTWHALHSVTPRAEPDSWM 681 ELGTWHALHSVTPRAEPDSWM Sbjct: 661 ELGTWHALHSVTPRAEPDSWM 681 >gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo sapiens] Length = 337 Score = 682 bits (1760), Expect = 0.0 Identities = 337/337 (100%), Positives = 337/337 (100%) Query: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT Sbjct: 1 MADPVAGIAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGT 60 Query: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL Sbjct: 61 TLCQHANAVTEAARALAAARPARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVL 120 Query: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA Sbjct: 121 MFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAA 180 Query: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS Sbjct: 181 GEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGKYRVGDS 240 Query: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT Sbjct: 241 SLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTT 300 Query: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR Sbjct: 301 SPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR 337 >gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] Length = 880 Score = 338 bits (866), Expect = 1e-92 Identities = 238/596 (39%), Positives = 300/596 (50%), Gaps = 99/596 (16%) Query: 1 MADPVAG-----IAGSAAKSVRPFRSSEAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTG 55 M+ P G G S+RPF+SSE Y+EAMKEDLAEWL LYGL + FL Sbjct: 1 MSQPAGGRRKPRTLGPPVCSIRPFKSSEQYLEAMKEDLAEWLRDLYGLDIDAAN--FLQV 58 Query: 56 LATGTTLCQHANAVTEAARALAAARPAR---------GVAFQAHSVVPGSFMARDNVATF 106 L TG LCQHAN VT+AA A A PA+ GV+ + PG+F ARDNV+ F Sbjct: 59 LETGLVLCQHANVVTDAALAFLAEAPAQAQKIPMPRVGVSCNG-AAQPGTFQARDNVSNF 117 Query: 107 IGWCRVELGVPEVLMFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAPRLVQFEQEIER 166 I WCR E+G+ EVLMFETEDLVLRKN K+VVLCLLE+ RR R G+ AP LVQ E+EIE Sbjct: 118 IQWCRKEMGIQEVLMFETEDLVLRKNVKNVVLCLLELGRRAWRFGVAAPTLVQLEEEIEE 177 Query: 167 ELR---AAPPAPNAPAAGEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPD 223 E+R A PP +P PAP PR P RNLD++V+ ++ CTCP Sbjct: 178 EVRRELALPPPDPSP----------PAP------PRRQPCHFRNLDQMVQSLVSHCTCPV 221 Query: 224 QFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRP 283 QF M+KVSEGKYRVGDS+ LIF+R+LR+HVMVRVGGGWDTL HYLDKHDPCRC+S +H+P Sbjct: 222 QFSMVKVSEGKYRVGDSNTLIFIRILRNHVMVRVGGGWDTLGHYLDKHDPCRCTSLSHKP 281 Query: 284 PQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLP 343 + PA PV R P T ++ ++ ++PP P D Sbjct: 282 --------------GSFLKPPAPPVQHEVRVQDGPSQTQPTMTISRS--QSPPPPVDWKT 325 Query: 344 PHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRS 403 RR + SS PRRER + GT AS P LR Sbjct: 326 YTSSDRRLRPPTPSSPR-----------------PRRERGA-----GTGASREMAPFLRC 363 Query: 404 QSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDG---------Q 454 Q R + R A S PSP + + R+ Q +R+ Sbjct: 364 QERSLIPSWRQPTAGD------SPPSPQSSSTQKGRDPQCTSSGKREERYPPELPRGRIP 417 Query: 455 HSWVPRGRGSGG--SGRSTPQTPRARSPAAPRLS-RVSSPSPELGTTPASIFRTPLQLDP 511 SWV S G +G TPQ RA +S R SP P PA L L Sbjct: 418 TSWVHEETDSWGTDAGNPTPQRLRAIEATTKGISARGPSPLPR-SFGPAECLGLRLPLRD 476 Query: 512 QQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSS 567 + + F+ E E + + ++ + + P PAR PP P ++ ++S S Sbjct: 477 EAKGAFFQFREPESVRSPTPVQGLTKIPIRLP---PAR---PPTPGRSFPGATSGS 526 >gi|219842340 growth arrest-specific 2 [Homo sapiens] Length = 313 Score = 170 bits (431), Expect = 3e-42 Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%) Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81 EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87 Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137 + + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146 Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197 LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194 Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254 + T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249 Query: 255 VRVGGGWDTLEHYLDKHDPCR 275 VRVGGGW+T YL KHDPCR Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270 >gi|29540559 growth arrest-specific 2 [Homo sapiens] Length = 313 Score = 170 bits (431), Expect = 3e-42 Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%) Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81 EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87 Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137 + + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146 Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197 LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194 Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254 + T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249 Query: 255 VRVGGGWDTLEHYLDKHDPCR 275 VRVGGGW+T YL KHDPCR Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270 >gi|4885253 growth arrest-specific 2 [Homo sapiens] Length = 313 Score = 170 bits (431), Expect = 3e-42 Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%) Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81 EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P Sbjct: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87 Query: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137 + + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V Sbjct: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146 Query: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197 LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G Sbjct: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194 Query: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254 + T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM Sbjct: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249 Query: 255 VRVGGGWDTLEHYLDKHDPCR 275 VRVGGGW+T YL KHDPCR Sbjct: 250 VRVGGGWETFAGYLLKHDPCR 270 >gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] Length = 694 Score = 166 bits (420), Expect = 7e-41 Identities = 179/656 (27%), Positives = 265/656 (40%), Gaps = 118/656 (17%) Query: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAARALAAAR-- 80 EA + M+EDL+ WL+ L LG+ + L L G LCQ + + + + Sbjct: 44 EATLLPMQEDLSIWLSGL--LGIKVKAEKLLEELDNGVLLCQLIDVLQNMVKTCNSEESG 101 Query: 81 --PARGVAFQAHSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVVL 138 P R V + + GSF ARDN A F+ WCR ++GV E +FE+E LVL K+ + V L Sbjct: 102 NFPMRKVPCKKDAA-SGSFFARDNTANFLHWCR-DIGVDETYLFESEGLVLHKDPRQVYL 159 Query: 139 CLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARGP 198 CLLE+ R +R G+ P LV+ E+EIE E ET P Sbjct: 160 CLLEIGRIVSRYGVEPPVLVKLEKEIELE------------------ETLLNTSGPEDSI 201 Query: 199 RMTPSDLRN--LDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLR-SHV 253 + S R+ L E V+ I C+C +F + +SEG+YR+GD ++F+R+L HV Sbjct: 202 SIPKSCCRHEELHEAVKHIAEDPPCSCSHRFSIEYLSEGRYRLGDK--ILFIRMLHGKHV 259 Query: 254 MVRVGGGWDTLEHYLDKHDPCRC-----------------------SSTAHRPPQPRVCT 290 MVRVGGGWDTL+ +L K+DPCR S A P P + Sbjct: 260 MVRVGGGWDTLQGFLLKYDPCRILQFATLEQKILAFQKGVSNESVPDSPARTPQPPEMNP 319 Query: 291 FSPQRVSPTTSPRPASPV--PGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLP----- 343 S + + +P+ PV P S+ + RP V S K G R +LP Sbjct: 320 LSAVNMFQKQNSKPSVPVSIPKSKEKQGRPPGALVPASSLKGGNLGSMSVRSKLPNSPAA 379 Query: 344 -PHPRSRRYSG--------DSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS 394 HP+ + G +++S+S A P+G T +PA Sbjct: 380 SSHPKLKSSKGITKKPQAPSNNASSSLASLNPVGK------------------NTSSPAL 421 Query: 395 PRRPPALRSQSRDRL---DRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDR 451 PR P + R + + + + P A L P S + Q L Sbjct: 422 PRTAPCISESPRKCISSPNTPKAKVIPAQNSADL--PESTLLPNKCSGKTQPKYLKHNHI 479 Query: 452 DGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPL--QL 509 + + V S P+ P+A P P+ S S S ++ T + T L Q Sbjct: 480 SSRDNAVSHLAAHSNSSSKCPKLPKANIPVRPKPSFQS--SAKMTKTSSKTIATGLGTQS 537 Query: 510 DPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPD---------PPAPDSAY 560 P + + + L +A L SV+ P ++ D P SA+ Sbjct: 538 QPSDGAPQAKPVPAQKLKSALNLNQPVSVSSVSPVKATQKSKDKNIVSATKKQPQNKSAF 597 Query: 561 CSSSSSS------SSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPG 610 + SS + LS++ P S +T ++ A S S +G P G Sbjct: 598 QKTGPSSLKSPGRTPLSIV----SLPQSSTKTQTAPKSAQTVAKSQHSTKGPPRSG 649 >gi|33188445 microfilament and actin filament cross-linker protein isoform a [Homo sapiens] Length = 5430 Score = 88.2 bits (217), Expect = 2e-17 Identities = 66/211 (31%), Positives = 94/211 (44%), Gaps = 28/211 (13%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYL 268 DE+ R++ +C C +F + ++ E KYR GDS L VR+LRS VMVRVGGGW L+ +L Sbjct: 5166 DEVTRQV-AQCKCAKRFQVEQIGENKYRFGDSQQLRLVRILRSTVMVRVGGGWMALDEFL 5224 Query: 269 DKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSP--------RPASPVPGSERRGSRPEM 320 K+DPCR + + R P+ S +P +P+S R S Sbjct: 5225 VKNDPCRARGRTN--IELREKFILPEGASQGMTPFRSRGRRSKPSSRAASPTRSSSSASQ 5282 Query: 321 TPVSLRSTKEGPETPPRPRDQLPP------------HPRSRRYSGDSDSSASSAQSGPLG 368 + S S P TP +P H +GD+ +S+S A +G Sbjct: 5283 SNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSLAGDTSNSSSPASTGAKT 5342 Query: 369 TRSDDTGTGPRRERPSRRL--TTGTPASPRR 397 R+D + RP R G+ AS RR Sbjct: 5343 NRADPKKSA---SRPGSRAGSRAGSRASSRR 5370 >gi|33188443 microfilament and actin filament cross-linker protein isoform b [Homo sapiens] Length = 5938 Score = 81.6 bits (200), Expect = 2e-15 Identities = 66/217 (30%), Positives = 94/217 (43%), Gaps = 34/217 (15%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYRV------GDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ E KYR GDS L VR+LRS VMVRVGGGW Sbjct: 5668 DEVTRQV-AQCKCAKRFQVEQIGENKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5726 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSP--------RPASPVPGSERR 314 L+ +L K+DPCR + + R P+ S +P +P+S R Sbjct: 5727 ALDEFLVKNDPCRARGRTN--IELREKFILPEGASQGMTPFRSRGRRSKPSSRAASPTRS 5784 Query: 315 GSRPEMTPVSLRSTKEGPETPPRPRDQLPP------------HPRSRRYSGDSDSSASSA 362 S + S S P TP +P H +GD+ +S+S A Sbjct: 5785 SSSASQSNHSCTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSLAGDTSNSSSPA 5844 Query: 363 QSGPLGTRSDDTGTGPRRERPSRRL--TTGTPASPRR 397 +G R+D + RP R G+ AS RR Sbjct: 5845 STGAKTNRADPKKSA---SRPGSRAGSRAGSRASSRR 5878 >gi|221316624 dystonin isoform 4 [Homo sapiens] Length = 5526 Score = 72.4 bits (176), Expect = 1e-12 Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW Sbjct: 5223 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5281 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR-VCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMT 321 L+ +L K+DPCR + + + + + PR P S RG+ P + Sbjct: 5282 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSS--RGASPNRS 5339 Query: 322 PVSLRSTKEGPETPPRPRDQLPP--HPRSRRY 351 S+ S +P P P HP +R Y Sbjct: 5340 -TSVSSQAAQAASPQVPATTTPKILHPLTRNY 5370 >gi|221316622 dystonin isoform 3 [Homo sapiens] Length = 5537 Score = 72.4 bits (176), Expect = 1e-12 Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW Sbjct: 5234 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5292 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR-VCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMT 321 L+ +L K+DPCR + + + + + PR P S RG+ P + Sbjct: 5293 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSS--RGASPNRS 5350 Query: 322 PVSLRSTKEGPETPPRPRDQLPP--HPRSRRY 351 S+ S +P P P HP +R Y Sbjct: 5351 -TSVSSQAAQAASPQVPATTTPKILHPLTRNY 5381 >gi|221316618 dystonin isoform 2 [Homo sapiens] Length = 5675 Score = 72.4 bits (176), Expect = 1e-12 Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW Sbjct: 5372 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5430 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR-VCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMT 321 L+ +L K+DPCR + + + + + PR P S RG+ P + Sbjct: 5431 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSS--RGASPNRS 5488 Query: 322 PVSLRSTKEGPETPPRPRDQLPP--HPRSRRY 351 S+ S +P P P HP +R Y Sbjct: 5489 -TSVSSQAAQAASPQVPATTTPKILHPLTRNY 5519 >gi|34577047 dystonin isoform 1 [Homo sapiens] Length = 5497 Score = 72.4 bits (176), Expect = 1e-12 Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW Sbjct: 5194 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 5252 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR-VCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMT 321 L+ +L K+DPCR + + + + + PR P S RG+ P + Sbjct: 5253 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSS--RGASPNRS 5310 Query: 322 PVSLRSTKEGPETPPRPRDQLPP--HPRSRRY 351 S+ S +P P P HP +R Y Sbjct: 5311 -TSVSSQAAQAASPQVPATTTPKILHPLTRNY 5341 >gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] Length = 5171 Score = 72.4 bits (176), Expect = 1e-12 Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%) Query: 209 DELVREILGRCTCPDQFPMIKVSEGKYR------VGDSSLLIFVRVLRSHVMVRVGGGWD 262 DE+ R++ +C C +F + ++ + KYR GDS L VR+LRS VMVRVGGGW Sbjct: 4868 DEVTRQV-AKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWM 4926 Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPR-VCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMT 321 L+ +L K+DPCR + + + + + PR P S RG+ P + Sbjct: 4927 ALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRPSS--RGASPNRS 4984 Query: 322 PVSLRSTKEGPETPPRPRDQLPP--HPRSRRY 351 S+ S +P P P HP +R Y Sbjct: 4985 -TSVSSQAAQAASPQVPATTTPKILHPLTRNY 5015 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 68.9 bits (167), Expect = 1e-11 Identities = 120/432 (27%), Positives = 149/432 (34%), Gaps = 67/432 (15%) Query: 277 SSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERR-GSRPEMTPVS---LRSTKEGP 332 SS+ PP P+ S S SP+PA P PGS R S P S + K Sbjct: 416 SSSESSPPSPQPTKVSRHASSSPESPKPA-PAPGSHREISSSPTSKNRSHGRAKRDKSHS 474 Query: 333 ETPPR--PRDQLP-PHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTT 389 TP R R + P R R S S P RS R P RR Sbjct: 475 HTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRR--- 531 Query: 390 GTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP--------SPARRARSQSREE 441 G SP+RP RS++ R RGR R A GR S +PARR RS+SR Sbjct: 532 GRSRSPQRPGWSRSRNTQR--RGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTP 589 Query: 442 QAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTP-----RARSPAAPRLSRVSSPSPELG 496 R + S R R GRS +TP R RSP R SR SP+ G Sbjct: 590 ARRRSRSRTPTRRRS---RSRTPARRGRSRSRTPARRRSRTRSPVR-RRSRSRSPARRSG 645 Query: 497 TTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAP----- 551 + + RTP + + + RR AR S TP +R P Sbjct: 646 RSRS---RTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRS 702 Query: 552 -----------DPPAPDSAYCSSSSSS----------SSLSVLGGKCGQPGDSGRTANGL 590 P S SSS S S + + S R + L Sbjct: 703 RSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSL 762 Query: 591 PGPRSQA-----LSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPS 645 PRS+A L S SPCP S ++P A+ R + R S Sbjct: 763 SSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPK---AKSRTPPRRSRSSS 819 Query: 646 RIPTPRGPRRPS 657 P + + PS Sbjct: 820 SPPPKQKSKTPS 831 Score = 65.9 bits (159), Expect = 1e-10 Identities = 69/225 (30%), Positives = 90/225 (40%), Gaps = 20/225 (8%) Query: 277 SSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVP-GSERRGSRPEMTPVSLRSTKEGPETP 335 SS + P PR P+R +S + P P GS S PE P S R+ + G + Sbjct: 1620 SSPEPKAPAPRAL---PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKS-RTARRGSRSS 1675 Query: 336 PRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP--RRERPSRRLTTGTPA 393 P P+ + PR R S SS + L RS + P R P R + + + Sbjct: 1676 PEPKTKSRTPPRRR----SSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVS 1731 Query: 394 SPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSP--ARRARSQSREEQAVLLVRRDR 451 SP RS SR R PR R + P P +R+RS+SR E+ RRDR Sbjct: 1732 SPEPAEKSRS-SRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDR 1790 Query: 452 DGQHSWVPRGRGSGGSGRSTPQTPR------ARSPAAPRLSRVSS 490 G R R S + R +RSPA SR SS Sbjct: 1791 SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSS 1835 Score = 61.2 bits (147), Expect = 3e-09 Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 31/223 (13%) Query: 297 SPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKE--GPETPPRPRDQLPPHPRSRRYSGD 354 +PTT R S P RR SR PV+ R ++ P T R R + P R R S Sbjct: 1939 TPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRT 1998 Query: 355 SDSS--ASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTP---ASPRRPPALRSQSRDRL 409 S + S +++ P+ R + T P R SR T P + R P A+R +SR R Sbjct: 1999 SPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSR- 2057 Query: 410 DRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGR 469 PR A G R S P+ RR+ S S +++ + + P R GS Sbjct: 2058 ---TPRTARGKRSLTRSPPAIRRRSASGSSSDRS----------RSATPPATRNHSGS-- 2102 Query: 470 STPQTPRARSPAAPRLSRVSSPS-PELGTTPASIFRTPLQLDP 511 +TP P A SR+S S P + TP R+P L+P Sbjct: 2103 ---RTP----PVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEP 2138 Score = 59.3 bits (142), Expect = 1e-08 Identities = 74/257 (28%), Positives = 104/257 (40%), Gaps = 35/257 (13%) Query: 275 RCSSTAHRPPQPRVCTFSPQRVSPT-TSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPE 333 R S +A P+ R T R SP+ +SP PA S RR R +P + +++ G Sbjct: 1705 RRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR--RSASSPRTKTTSRRGRS 1762 Query: 334 TPPRPRDQLPPHPRSRRY----------SGDSDSSASSAQ---SGPLGTRSDDTGTGPRR 380 P+PR RSRR SG S S++ Q S TR G+G Sbjct: 1763 PSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHS 1822 Query: 381 ERPSRRLTTGTPASPRR-----PPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435 P+R+ ++ T + RR PP R +SR R AP R + P+ RR+R Sbjct: 1823 RSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSP-----APWKRSRSRASPATHRRSR 1877 Query: 436 SQS------REEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVS 489 S++ R V R R + V R R R++P + R P ++R Sbjct: 1878 SRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRR---SRSRASPVSRRRSRSRTPPVTRRR 1934 Query: 490 SPSPELGTTPASIFRTP 506 S S T S RTP Sbjct: 1935 SRSRTPTTRRRSRSRTP 1951 Score = 55.8 bits (133), Expect = 1e-07 Identities = 109/426 (25%), Positives = 150/426 (35%), Gaps = 95/426 (22%) Query: 292 SPQRVSPTTSP-RPA-SPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSR 349 SPQR + SP RP S ++RRG + RS P T R R + P +R Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQRRGR--SRSARRGRSHSRSPATRGRSRSRTP----AR 580 Query: 350 RYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRL 409 R S + A TR P R SR T S R P +R +SR R Sbjct: 581 RGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSP-VRRRSRSR- 638 Query: 410 DRGRPRGAPGGRGAQLSVPSPARRARSQSR------------------------------ 439 +P R + +PARR RS+SR Sbjct: 639 -------SPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGR 691 Query: 440 ---------EEQAVLLVRRDRDGQHSWVPRGRGSGGS-----GRSTPQTPRARSPAAPRL 485 ++ LVRR R HS P+ RG GS +S R+RS ++P + Sbjct: 692 SRSRTPRRGRSRSRSLVRRGR--SHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEM 749 Query: 486 --SRVSSPSPELGTTPASIFRTPLQLD---------PQQEQQLFRRLEEEFLANARALEA 534 SR+SS ++P S ++ L L P+Q+ Q R + +A Sbjct: 750 KKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKA--- 806 Query: 535 VASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPR 594 S TP P + + PP S S S SSS + +G P + Sbjct: 807 -KSRTP--PRRSRSSSSPPPKQKSKTPSRQSHSSS-----------SPHPKVKSGTPPRQ 852 Query: 595 SQALSSSSDEGSPCPGMGGPLD-APGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGP 653 S ++E S P + +P L PSR G + P R S P + P Sbjct: 853 GSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSG---SSPPRVKSSTPPRQSP 909 Query: 654 RRPSGP 659 R S P Sbjct: 910 SRSSSP 915 Score = 55.5 bits (132), Expect = 2e-07 Identities = 89/377 (23%), Positives = 119/377 (31%), Gaps = 48/377 (12%) Query: 300 TSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHP--RSRRYSGDSDS 357 TS R A + G+ R ++ S + P R R + PP +SR S + S Sbjct: 2367 TSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPS 2426 Query: 358 SASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGA 417 +S P + PR PS + P SQS + Sbjct: 2427 PSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSS 2486 Query: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRA 477 G LSVP+P HS V G +G P A Sbjct: 2487 AGDHNGMLSVPAPGV---------------------PHSDV--GEPPASTGAQQPSALAA 2523 Query: 478 RSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVAS 537 PA R S SS S ++ +S + E + A+ Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSD-----SEGSSLPVQPEVALKR 2578 Query: 538 VTPTGPAPDPA-RAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQ 596 V PAP A R PP P A SSSSS S S +++ S Sbjct: 2579 VPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2638 Query: 597 ALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQP---------------- 640 + SSSS SP P GP P P + +P R R +P Sbjct: 2639 SSSSSSSSSSPSPAKPGPQALP-KPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVE 2697 Query: 641 DRKPSRIPTPRGPRRPS 657 R+PS P+PR + S Sbjct: 2698 RRRPSPQPSPRDQQSSS 2714 Score = 54.7 bits (130), Expect = 3e-07 Identities = 78/317 (24%), Positives = 116/317 (36%), Gaps = 32/317 (10%) Query: 175 PNAPAAGEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQFPMIKVSEGK 234 P P+ G +++P P + PR R+ E+ +C P + Sbjct: 1470 PRTPSRGRSECDSSPEPKALPQTPRP-----RSRSPSSPELNNKCLTPQ----------R 1514 Query: 235 YRVGDSSLLIFVRVLRSHVMVRVGGGWDTLEHYLDKHDPCRCSSTAHRPPQPRVCTFSP- 293 R G S + V R+ + R G P S + P + T +P Sbjct: 1515 ERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQE-RSESDSSPDSKAKTRTPL 1573 Query: 294 -QRVSPTTSPRPASPV---PGSERRGSRPEMT--PVSLRSTKEGPETPPRPRDQLPPHPR 347 QR +SP S P R GS PE+ P + + G ++ P P+ P Sbjct: 1574 RQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAP---- 1629 Query: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407 R S S +SS GP S T + P SR G+ +SP R+ R Sbjct: 1630 -RALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR 1688 Query: 408 RLDRGRP---RGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGS 464 R R P R A R ++ + SP R+R+ R ++ V + S R R S Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP-SVSSPEPAEKSRSSRRRRS 1747 Query: 465 GGSGRSTPQTPRARSPA 481 S R+ + R RSP+ Sbjct: 1748 ASSPRTKTTSRRGRSPS 1764 Score = 54.3 bits (129), Expect = 4e-07 Identities = 77/293 (26%), Positives = 113/293 (38%), Gaps = 46/293 (15%) Query: 289 CTFSPQRVSPTTSPRPASPVPGS------------ERRGSRPEMTPVSLRSTKEGPETPP 336 C SP+ + +PRP S P S ER GS + ++ T G + Sbjct: 1480 CDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRS 1539 Query: 337 RPRDQLPPHPRS---RRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPA 393 +L P + R DS + + PL RS +G+ P + SR Sbjct: 1540 GSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSR-SGSSPEVDSKSR-------L 1591 Query: 394 SPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDG 453 SPRR RS S + + +PR AP + S P P A L RR R G Sbjct: 1592 SPRRS---RSGSSPEV-KDKPRAAPRAQSGSDSSPEPKAPAPRA--------LPRRSRSG 1639 Query: 454 QHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQ 513 S +GRG G S+ ++ P + R S SPE P + RTP + ++ Sbjct: 1640 SSS---KGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPE----PKTKSRTPPR---RR 1689 Query: 514 EQQLFRRLEEEFLANARALEAVAS-VTPTGPAPDPARAPDPPAPDSAYCSSSS 565 + L + + R+ A +S T + P R+P +P+ A S SS Sbjct: 1690 SSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSS 1742 Score = 50.4 bits (119), Expect = 5e-06 Identities = 99/427 (23%), Positives = 155/427 (36%), Gaps = 46/427 (10%) Query: 256 RVGGGWDTLEHYLD--KHDPCRCSSTAHRP-PQPRVCTFSPQRVSPTTSPRPASPVPGSE 312 R+ + + Y+D DP R + A +P P+P + S + SP P + Sbjct: 134 RLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKK 193 Query: 313 R-RGSRPEMTPV------SLRSTKEGPETPPRPRDQLPPHPRSRRYSGD-------SDSS 358 + RG R E + S + K E+ + R P P+S+R S D S + Sbjct: 194 KDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTP 253 Query: 359 ASSAQSGPLGTRSDDTGTGPRRERPSRRLT--TGTPASPRRPPALRSQSRDRLDRGRPRG 416 A ++ T +D + SR T T A R P+ S R D P Sbjct: 254 APKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGD--APFS 311 Query: 417 APGGRGAQL-SVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTP 475 PG Q S P A + S E+ +D+D + R S + P+ P Sbjct: 312 EPGTTSTQRPSSPETATKQPSSPYED-------KDKDKKEKSATRPSPSPERSSTGPEPP 364 Query: 476 RARSPAAPRLSRVSSPSPELGTTPAS--IFRTPLQLDPQQEQQLFRRLEEEFLANARALE 533 A R SP P L TTP S P + P +++ + E+ ++ + Sbjct: 365 APTPLLAER--HGGSPQP-LATTPLSQEPVNPPSEASPTRDRSP-PKSPEKLPQSSSSES 420 Query: 534 AVASVTPTGPAPDPARAPDPPAPDSA---YCSSSSSSSSLSVLGGKCGQPGDSGRTANGL 590 + S PT + + +P+ P P A + SSS +S + G+ + T + Sbjct: 421 SPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRR 480 Query: 591 PG-PRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPT 649 G RS A + S P G + + ++ W R R P R Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGR-------SRSPQRRGR 533 Query: 650 PRGPRRP 656 R P+RP Sbjct: 534 SRSPQRP 540 Score = 45.4 bits (106), Expect = 2e-04 Identities = 59/214 (27%), Positives = 80/214 (37%), Gaps = 33/214 (15%) Query: 283 PPQPRVCTFSPQRV-SPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQ 341 P QP V +RV SPT +P+ A R G PE TP R + + Sbjct: 2569 PVQPEVAL---KRVPSPTPAPKEAV------REGRPPEPTPAK-RKRRSSSSSSSSSSSS 2618 Query: 342 LPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPAL 401 S S S SS+SS+ S S + + P +P + PASP++PP Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSS------SSSSSSSPSPAKPGPQ-ALPKPASPKKPP-- 2669 Query: 402 RSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG 461 +R R + R ++ SP R R + RD Q S RG Sbjct: 2670 ---PGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPS--------PRDQQSSSSERG 2718 Query: 462 --RGSGGSGRSTPQTPRARSPAAPRLSRVSSPSP 493 RG G RS R +P+ + SS SP Sbjct: 2719 SRRGQRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752 Score = 43.1 bits (100), Expect = 8e-04 Identities = 81/359 (22%), Positives = 124/359 (34%), Gaps = 72/359 (20%) Query: 263 TLEHYLDKHDPCRCSSTAHRPPQPRVCTFSPQ---RVSPTTSPRPASPVPGSERRGSRPE 319 +L L PC + P + R + P+ R P S +SP P + + + Sbjct: 774 SLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQ 833 Query: 320 MTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPR 379 S K TPPR P + + S S+ L +R+ Sbjct: 834 SHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRT-------- 885 Query: 380 RERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSR 439 PSR +G+ PP ++S + R SP+R + Q + Sbjct: 886 ---PSRHSCSGS-----SPPRVKSSTPPR-------------------QSPSRSSSPQPK 918 Query: 440 EEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAA-------PRLSRVSSPS 492 + + +R G S P S + R+TP+ R+ SP + PR S S S Sbjct: 919 VKAIISPRQRSHSGSSSPSP----SRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSS 974 Query: 493 PELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPD 552 P+ P TP P+Q + V + TP GP+ +++P Sbjct: 975 PDTKVKP----ETP----PRQSHS----------GSISPYPKVKAQTPPGPSLSGSKSP- 1015 Query: 553 PPAPDSAYCSSSSSSSSLSVLGG--KCGQPGDS--GRTANGLPGPRSQALSSSSDEGSP 607 P S S SLS+ G PG+S G ++ L G + SD SP Sbjct: 1016 CPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDTSSP 1074 Score = 39.3 bits (90), Expect = 0.012 Identities = 72/314 (22%), Positives = 109/314 (34%), Gaps = 40/314 (12%) Query: 268 LDKHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRP-----ASPVPGSERRGSRPEMTP 322 L P R S + PP+ + T Q S ++SP+P SP S S P + Sbjct: 881 LKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSR 940 Query: 323 VSLRSTKEGPETPPRPRDQLP-PHPRSR---RYSGDSDSSASSAQSGPLGTRSDDTGTGP 378 V+ R+ TP R R P + SR RYS SS + R +G+ Sbjct: 941 VTSRT------TPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSIS 994 Query: 379 RRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP---------S 429 + + G S + P + +S+D L + P G + S P S Sbjct: 995 PYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSS 1054 Query: 430 PARRARSQS----REEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTP----RARSPA 481 + +SQ+ R + + VR+ S + + S GRS +P +RSP Sbjct: 1055 LQLKGQSQTSPDHRSDTSSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPI 1114 Query: 482 APRLSRVS-SPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTP 540 S SP + G +P Q Q + + ++ L LE S Sbjct: 1115 RQDRGEFSASPMLKSGMSPE-------QSRFQSDSSSYPTVDSNSLLGQSRLETAESKEK 1167 Query: 541 TGPAPDPARAPDPP 554 P PP Sbjct: 1168 MALPPQEDATASPP 1181 Score = 33.1 bits (74), Expect = 0.87 Identities = 41/171 (23%), Positives = 58/171 (33%), Gaps = 38/171 (22%) Query: 282 RPPQP-------RVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRST-----K 329 RPP+P R + S S ++S +S S S + S S+ K Sbjct: 2594 RPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK 2653 Query: 330 EGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTT 389 GP+ P+P P P RR PR+ S R + Sbjct: 2654 PGPQALPKPASPKKPPPGERR------------------------SRSPRKPIDSLRDSR 2689 Query: 390 GTPASP--RRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQS 438 SP RR P+ + RD+ RG+ G+ PS RR + S Sbjct: 2690 SLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPS 2740 Score = 31.6 bits (70), Expect = 2.5 Identities = 97/438 (22%), Positives = 145/438 (33%), Gaps = 60/438 (13%) Query: 275 RCSSTAHRPP----QPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTK- 329 R S + PP R+ FS +SPT R SP SR M+ + Sbjct: 2097 RNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSRTPMSVLQQAGGSM 2156 Query: 330 ---EGPETPPRPRDQLPPHPRSRRYS--------GDSDSSASSAQSGPLGTRSDDTGTGP 378 GP P R +P + R + G + S + +G S P Sbjct: 2157 MDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVP 2216 Query: 379 R---RERPSRRLTTGTPAS------------PRRPPALR-SQSRD-----RLDRGRPRGA 417 R P+ L + PA+ P P A+ + SR ++ PR A Sbjct: 2217 LMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTA 2276 Query: 418 PGGRGAQLSVP-SPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPR 476 L+ P +P A + + L G S P + S TPQ P Sbjct: 2277 VAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTG--SGTPPTAANYPSSSRTPQAPA 2334 Query: 477 ARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANAR----AL 532 + + PR + ++P G+ A+ P L ++ L L + R A Sbjct: 2335 SANLVGPRSAHATAPVNIAGSRTAAAL-APASL---TSARMAPALSGANLTSPRVPLSAY 2390 Query: 533 EAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPG 592 E V+ T + P D AR+ PP+ S +S + S S + GQ Sbjct: 2391 ERVSGRT-SPPLLDRARSRTPPSAPSQSRMTSERAPSPS---SRMGQAPSQSLLPPAQDQ 2446 Query: 593 PRSQALSSSSDEG----SPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQ----PDRKP 644 PRS S+ SD+ + + G +A T S G + P Sbjct: 2447 PRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDV 2506 Query: 645 SRIPTPRGPRRPSGPAEL 662 P G ++PS A L Sbjct: 2507 GEPPASTGAQQPSALAAL 2524 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 66.2 bits (160), Expect = 9e-11 Identities = 109/388 (28%), Positives = 130/388 (33%), Gaps = 64/388 (16%) Query: 286 PRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRP--RDQLP 343 PR T P + PA P PG RG P GP+ PP P +D LP Sbjct: 923 PRGITGKPGPKGNSGGDGPAGP-PGE--RGPNGPQGPTGF----PGPKGPPGPPGKDGLP 975 Query: 344 PHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRP----- 398 HP R +G + G +G + TGP ER G P P P Sbjct: 976 GHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGER-------GHPGPPGPPGEQGL 1028 Query: 399 PALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVL--LVRRDRDGQHS 456 P L + + D G P G PG G P R R + L + +G Sbjct: 1029 PGLAGKEGTKGDPG-PAGLPGKDGP------PGLRGFPGDRGLPGPVGALGLKGNEGP-- 1079 Query: 457 WVPRGRGSGGSGRSTPQTPRARSPA--APRLSRVSSPSPELGTTPASIFRTPLQLDPQQE 514 P G GS P R PA A + P P+ PA P + PQ Sbjct: 1080 --PGPPGPAGS-------PGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGP 1130 Query: 515 QQLFRRLEEEFLANARALEAVAS-VTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVL 573 + L L A V P G D +P S + Sbjct: 1131 AG------RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGP 1184 Query: 574 GGKCGQPGDSGRTANGLPGPRSQA--LSSSSDEGSP-CPGMGGPLDAPGSPLACTEPSRT 630 G GQPG SG A+G PGPR Q DEG PG GP+ G P E T Sbjct: 1185 QGPIGQPGPSG--ADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGET 1242 Query: 631 WARGRMDTQPDRKPSRIPTPRGPRRPSG 658 G+M P P GPR PSG Sbjct: 1243 GDVGQMGP---------PGPPGPRGPSG 1261 Score = 51.2 bits (121), Expect = 3e-06 Identities = 97/391 (24%), Positives = 128/391 (32%), Gaps = 70/391 (17%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASP--VPGSERRGSRPEM--TPVSLRSTKEGPET--PP 336 PP + T ++ P P P P PG++ P P ++ E E P Sbjct: 1235 PPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPG 1294 Query: 337 RPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPR 396 P + PP P+ R G+ S S +GP G + GP+ P G P P Sbjct: 1295 LPGEGGPPGPKGER--GEKGESGPSGAAGPPGPKGPPGDDGPKGS-PGPVGFPGDPGPPG 1351 Query: 397 RP-PALRS-QSRDRLDRGRP--RGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRD 452 P PA + D+ D G P G+PG G P +R + R Sbjct: 1352 EPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEG-------RQ 1404 Query: 453 GQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPE-LGTTPASIFRTPLQLDP 511 G+ G G++ P P+ AP P P+ L P P Sbjct: 1405 GEKGAKGEAGLEGPPGKTGPIGPQG----AP-----GKPGPDGLRGIPG----------P 1445 Query: 512 QQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAP--DPPAPDSAYCSSSSSSSS 569 EQ L P P PD P P P S Sbjct: 1446 VGEQGL----------------------PGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKG 1483 Query: 570 LSVLGGKCGQPGDSGRTAN-GLPGPRSQALSSSSDEGSP-CPGMGGPLDAPGSPLACTEP 627 L G G PG+ G + GLPGP+ SS +G G GP+ PG P P Sbjct: 1484 HPGLIGLIGPPGEQGEKGDRGLPGPQG----SSGPKGEQGITGPSGPIGPPGPPGLPGPP 1539 Query: 628 SRTWARGRMDTQPDRKPSRIPTPRGPRRPSG 658 A+G + + P P GP P G Sbjct: 1540 GPKGAKGSSGPTGPKGEAGHPGPPGPPGPPG 1570 Score = 47.8 bits (112), Expect = 3e-05 Identities = 91/345 (26%), Positives = 115/345 (33%), Gaps = 81/345 (23%) Query: 351 YSGDSDSSASSAQSGPLGTRSDDTGTGPRRER-----------PSRRLTTGTPASPRRP- 398 + GD + GP G R +D GP+ P + G P P P Sbjct: 818 FKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG 877 Query: 399 ----------PALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVR 448 P + ++ RG P G PG RG +R + R E+ Sbjct: 878 RQGPKGSIGFPGFPGANGEKGGRGTP-GKPGPRG---------QRGPTGPRGERGP---- 923 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 R G+ P+G SGG G + P P R P P+ P P+ P + L Sbjct: 924 RGITGKPG--PKGN-SGGDGPAGP--PGERGPNGPQ-GPTGFPGPKGPPGPPG--KDGLP 975 Query: 509 LDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARA-----PDPPAPDS----- 558 P Q R E F V P GP + P PP P Sbjct: 976 GHPGQ------RGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLP 1029 Query: 559 --AYCSSSSSSSSLSVLGGKCGQPGDSGRTAN-GLPGPRSQALSSSSDEGSPCPGMGGPL 615 A + + L GK G PG G + GLPGP AL +EG P P GP Sbjct: 1030 GLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG-ALGLKGNEGPPGPP--GPA 1086 Query: 616 DAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 +PG E A G P IP GP+ P GPA Sbjct: 1087 GSPG------ERGPAGAAG---------PIGIPGRPGPQGPPGPA 1116 Score = 43.5 bits (101), Expect = 6e-04 Identities = 88/375 (23%), Positives = 117/375 (31%), Gaps = 71/375 (18%) Query: 302 PRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASS 361 P P P RG P+ + P RP Q PP P + + Sbjct: 1080 PGPPGPAGSPGERGPAGAAGPIGI---------PGRPGPQGPPGPAGEK--------GAP 1122 Query: 362 AQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRP------- 414 + GP G D GP + PA P PP + D+ + G P Sbjct: 1123 GEKGPQGPAGRDGLQGP--------VGLPGPAGPVGPPG---EDGDKGEIGEPGQKGSKG 1171 Query: 415 ----RGAPGGRGAQ--LSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSG 468 +G PG G Q + P P+ Q L ++ +G + G G Sbjct: 1172 DKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQG 1231 Query: 469 RSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLAN 528 P + + ++ P P G + A P PQ Sbjct: 1232 LPGPPGEKGETGDVGQMGPPGPPGPR-GPSGA-----PGADGPQGPP-----------GG 1274 Query: 529 ARALEAVASVTPTGPAPDPARAPD--PPAPDSAYCSSSSSS-SSLSVLGGKCGQPGDSGR 585 AV G A +P + PP P S S + G G PGD G Sbjct: 1275 IGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDG- 1333 Query: 586 TANGLPGPRSQALSSSSDEGSPC-PGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKP 644 G PGP + D G P PG G PG EP +T + G + P Sbjct: 1334 -PKGSPGP----VGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTG---EPGP 1385 Query: 645 SRIPTPRGPRRPSGP 659 S P RGP P+GP Sbjct: 1386 SGPPGKRGPPGPAGP 1400 Score = 35.4 bits (80), Expect = 0.18 Identities = 36/128 (28%), Positives = 44/128 (34%), Gaps = 19/128 (14%) Query: 540 PTGPAP----DPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTAN----GLP 591 P P P P P PP P +V G G+PG G+ N GLP Sbjct: 675 PGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNV--GPQGEPGPPGQQGNPGAQGLP 732 Query: 592 GPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPR 651 GP+ P PG GPL PG P G+ ++ P P+ Sbjct: 733 GPQGAI--------GP-PGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQ 783 Query: 652 GPRRPSGP 659 GP GP Sbjct: 784 GPIGYPGP 791 Score = 33.9 bits (76), Expect = 0.51 Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 6/91 (6%) Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPR----RERPSRRLTTGTPASP 395 D L P + + GD S G G R DD GPR P L P P Sbjct: 633 DGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGP 692 Query: 396 RRPPALRSQSRDRLDRGR--PRGAPGGRGAQ 424 PP + +G P+G PG G Q Sbjct: 693 PGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQ 723 Score = 31.2 bits (69), Expect = 3.3 Identities = 31/123 (25%), Positives = 41/123 (33%), Gaps = 9/123 (7%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSS-SSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQAL 598 PTG DP P P ++ +L + G GD+G + SQA Sbjct: 488 PTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQ 547 Query: 599 SSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRM-DTQPDRKPSRIPTPRGPRRPS 657 + G GP+ G P P +G D P PRG + P Sbjct: 548 AILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQ-------GPRGVQGPP 600 Query: 658 GPA 660 GPA Sbjct: 601 GPA 603 Score = 30.0 bits (66), Expect = 7.4 Identities = 29/93 (31%), Positives = 34/93 (36%), Gaps = 13/93 (13%) Query: 575 GKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCP----GMGGPLDAPGSPLACTEPSRT 630 GK G PG+ G G PGP+ G P P G G G+ E Sbjct: 766 GKEGPPGEKG--GQGPPGPQGPI-------GYPGPRGVKGADGIRGLKGTKGEKGEDGFP 816 Query: 631 WARGRMDTQPDRKPSRIPTPRGPRRPSGPAELG 663 +G M + DR P PRG P GP G Sbjct: 817 GFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRG 849 >gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapiens] Length = 673 Score = 64.7 bits (156), Expect = 3e-10 Identities = 92/322 (28%), Positives = 124/322 (38%), Gaps = 56/322 (17%) Query: 277 SSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSER---RGSRPEMTPVSLRSTKEGPE 333 +S + PP+ + T +P R SPT P ASP R GS + L ST Sbjct: 329 ASISRTPPRASI-TRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTG 387 Query: 334 TPPR---------------PRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGP 378 TPPR P P SR DS+AS ++ P R+ TGT P Sbjct: 388 TPPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPP---RASPTGTPP 444 Query: 379 RRE---RPSRRLTTGT--PASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARR 433 R PSR TGT ASP P+ S + P G+P R + PS A Sbjct: 445 RASPTGTPSRASPTGTQSTASPTGSPSTASPTGSP-STASPTGSP-SRASLTRTPSRA-- 500 Query: 434 ARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR-SPAAPRLSRVSS-- 490 S ++ E + R +W P S S +P T A SP+ L+R S Sbjct: 501 --SLTKMESTASITRTPSRASPTWTP----STASPTGSPSTALAMGSPSRAALTRTPSRA 554 Query: 491 -----PSPELGTTP--ASIFRTP-----LQLDPQQEQQ-LFRRLEEEFLANARAL---EA 534 PS TTP AS+ RTP ++ P + R + ++ L ++ Sbjct: 555 SLTRTPSRASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDS 614 Query: 535 VASVTPTGPAPDPARAPDPPAP 556 AS+T T P P P +P Sbjct: 615 TASITRTPPRASPTETPPRASP 636 Score = 54.3 bits (129), Expect = 4e-07 Identities = 112/462 (24%), Positives = 151/462 (32%), Gaps = 97/462 (20%) Query: 282 RPPQPRVCTFSPQRVSPTTSPRPA--SPVPGSERRGSRPE--------------MTPVSL 325 R P T SP R S TT+P A S P + + P MTP + Sbjct: 114 RRPSTASLTRSPSRASLTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRASLTMTPSTA 173 Query: 326 RSTKEGPETPP--RPRDQLPPHPRSRRYSGDSDSSAS----SAQSGPLGT--RSDDTGTG 377 T+ P P P P S DS+AS +++ P GT R+ TG+ Sbjct: 174 SLTRTPPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSP 233 Query: 378 PRRE---RPSRRLTTGTPASPRRPP---------------ALRSQSRDRLDRGRPRGAPG 419 PR PS L TP PR P A +++ R P G P Sbjct: 234 PRASLSMMPSTALLIRTP--PRASPTGMLSRTSLTKMDSTASITRTPSRPSTASPTGTP- 290 Query: 420 GRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWV-------------------PR 460 R + PS A R R +L R S P Sbjct: 291 SRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRASPT 350 Query: 461 GRGSGGSGRSTP-QTPRARSPAAPRLSRVSSPSPELGTTP----------ASIFRTPLQL 509 G+ S S TP + SP+ L+ +SS + GT P AS+ R P + Sbjct: 351 GKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKPPRA 410 Query: 510 DPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSS--SSS 567 P + + A+ AS T T P P P +P ++S S Sbjct: 411 SPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSP 470 Query: 568 SSLSVLG-----GKCGQPGDSGRTANGLPGPRSQALSSSSDEGSP-------CPGMGGPL 615 S+ S G G P + T ++ S++S +P P P Sbjct: 471 STASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPT 530 Query: 616 DAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPS 657 +P + LA PSR R PSR R P R S Sbjct: 531 GSPSTALAMGSPSR--------AALTRTPSRASLTRTPSRAS 564 Score = 48.1 bits (113), Expect = 3e-05 Identities = 98/425 (23%), Positives = 144/425 (33%), Gaps = 40/425 (9%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTP-VSLRSTKEG 331 P R S T R P T +P R S T +P AS + G+ R S P SL+ T Sbjct: 8 PSRASPT--RTPSTASLTGTPSRASLTGTPSTAS-LMGTPSRASLTGTPPRASLKGTTSM 64 Query: 332 PETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDT---------GTGPRRER 382 P +S + S AS + P +R+ T Sbjct: 65 ASLMVSPSRASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRS 124 Query: 383 PSRRLTTGTPA------SPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARS 436 PSR T TP+ +P AL SR L R PR + PS A R+ Sbjct: 125 PSRASLTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRAS------LTMTPSTASLTRT 178 Query: 437 QSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSP---SP 493 R + R G S + + + + + + PR S SP S Sbjct: 179 PPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASL 238 Query: 494 ELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDP 553 + + A + RTP + P L R + +++ AS+T T P A Sbjct: 239 SMMPSTALLIRTPPRASPTG--MLSR-------TSLTKMDSTASITRTPSRPSTASPTGT 289 Query: 554 PAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTA-NGLPGPRSQALSSSSDEGSPCPGMG 612 P+ A S + S++SL + + G RT+ + S + + + P Sbjct: 290 PS--RASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPSRA 347 Query: 613 GPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAELGTWHALHSVT 672 P P + PSR G T S +P G + P + +L Sbjct: 348 SPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKP 407 Query: 673 PRAEP 677 PRA P Sbjct: 408 PRASP 412 Score = 35.0 bits (79), Expect = 0.23 Identities = 43/142 (30%), Positives = 53/142 (37%), Gaps = 23/142 (16%) Query: 284 PQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR--PRDQ 341 P T +P R S T +P AS S +R TP ++ T+ P P P Sbjct: 542 PSRAALTRTPSRASLTRTPSRASLTTPSRASLTR---TPSTVLLTRMPPSASPTGMPSRT 598 Query: 342 LPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRE---RPSRRLTTGTP--ASPR 396 P S DS+AS ++ P R+ T T PR P R TGTP ASP Sbjct: 599 SPTGMPSSALLTKMDSTASITRTPP---RASPTETPPRASPTGTPPRASPTGTPPRASPT 655 Query: 397 RPPALRSQSRDRLDRGRPRGAP 418 P R P G P Sbjct: 656 GTP----------PRASPTGTP 667 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 64.7 bits (156), Expect = 3e-10 Identities = 108/438 (24%), Positives = 154/438 (35%), Gaps = 75/438 (17%) Query: 282 RPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPR--PR 339 R P PR T + P R SPV RR S ++ S S+ +PP+ P+ Sbjct: 319 RRPSPRRRTPPRRMPPPPRHRRSRSPV--RRRRRSSASLSGSSSSSSSSRSRSPPKKPPK 376 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 P ++RR S + + P T T P ++ +R + SP R Sbjct: 377 RTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTS 436 Query: 400 ALRSQSRDRLDRGRPRGAPGGRGAQLSVPS-----------------PARRARSQSREEQ 442 ++ + R P AP R +LS RR QS + Sbjct: 437 GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDS 496 Query: 443 AVLLVRRDRDGQHSWVPRG-----------RGSGGSGR-----STPQTPRARSPAAPRLS 486 D + S V G R + S R ++P+ R RSP+ P Sbjct: 497 GSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTR 556 Query: 487 RVSSPSP------ELGTTPASIFRTPLQLDPQQEQQLFRR----LEEEFLANARALEAVA 536 R SPSP TP RTP P++ RR ++ + + A Sbjct: 557 RRRSPSPAPPPRRRRTPTPPPRRRTP-SPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA 615 Query: 537 SVTP-----TGPAPDPAR--APDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANG 589 S P P+P P R + PP + + S SLS K P S R A Sbjct: 616 SPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARS 675 Query: 590 -------LPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDR 642 P PR +A +SS SP P G A SP PS + T+P R Sbjct: 676 PQPNKRHSPSPRPRAPQTSS---SPPPVRRG---ASSSPQRRQSPSPS-------TRPIR 722 Query: 643 KPSRIPTPRGPRRPSGPA 660 + SR P P+ ++ + P+ Sbjct: 723 RVSRTPEPKKIKKAASPS 740 Score = 64.3 bits (155), Expect = 4e-10 Identities = 78/321 (24%), Positives = 117/321 (36%), Gaps = 52/321 (16%) Query: 270 KHDPCRCSSTAHRPPQPRVCTFSPQRVSPTTSP----RPASPVPGSERRGSRPEMTPVSL 325 +H P R +S + R Q +R SP+ P R SP P RR + TP Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTP---TPPPR 578 Query: 326 RSTKEGPETPPRPRDQLPPH---PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRER 382 R T P PPR R P P RRYS +A P R P+R Sbjct: 579 RRT---PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKR-- 633 Query: 383 PSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQ 442 R++ P R P + +S + R +P + P P +R Sbjct: 634 ---RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR--------- 681 Query: 443 AVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASI 502 HS PR R PQT S + P + R +S SP+ +P+ Sbjct: 682 ------------HSPSPRPRA--------PQT----SSSPPPVRRGASSSPQRRQSPSPS 717 Query: 503 FRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCS 562 R ++ E + ++ + R + + SV+ + P P + P PP+P + Sbjct: 718 TRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGS-PEPAAKKPPAPPSPVQSQSP 776 Query: 563 SSSSSSSLSVLGGKCGQPGDS 583 S++ S ++ V K P S Sbjct: 777 STNWSPAVPVKKAKSPTPSPS 797 Score = 59.3 bits (142), Expect = 1e-08 Identities = 99/401 (24%), Positives = 134/401 (33%), Gaps = 62/401 (15%) Query: 297 SPTTSPRPASPVPGSERRGSRPEMTPVSLR----STKEG-----------PETPPRPRDQ 341 SP + SP P E++ PE+ S++ S +E PE P P++ Sbjct: 200 SPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEP 259 Query: 342 LPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPA-SPRRPPA 400 P + + S ++S +RS P RP RR + + + SPRR P+ Sbjct: 260 SPEKNSKKEKEKEKTRPRSRSRSK---SRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPS 316 Query: 401 LRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPR 460 R R +P R +P P R RS+S VRR R S Sbjct: 317 PRR-----------RPSPRRRTPPRRMPPPPRHRRSRSP-------VRRRRRSSASLSGS 358 Query: 461 GRGSGGS-GRSTPQTPRARSPAAPRLSRVSSPS---PELGTTPASIFRTP--LQLDPQQE 514 S S RS P+ P R+ + PR +R SPS P P+ P + P + Sbjct: 359 SSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQ 418 Query: 515 QQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLG 574 Q R ++ R V T P+ AP P + S S + Sbjct: 419 QSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE---LSESEEDKGGKMAA 475 Query: 575 GKCGQPGDSGRTANGLPGPRSQALSSSSDE---------GSPCPGMGGPLDAPGSPLACT 625 Q R N S + SSS DE G SP Sbjct: 476 ADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRK 535 Query: 626 EPSRTWARGRMDTQPD-------RKPSRIPTPRGPRRPSGP 659 T RGR P R PS P PR R P+ P Sbjct: 536 RQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPP 576 Score = 53.5 bits (127), Expect = 6e-07 Identities = 86/324 (26%), Positives = 116/324 (35%), Gaps = 59/324 (18%) Query: 275 RCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPET 334 R S A P + R T P+R +P+ PR SP P RR S P S P Sbjct: 559 RSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSP---RRYSPPIQRRYS-------PSP 608 Query: 335 PPRPRDQLPPHPRSRRYSGD-------SDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 PP+ R PP P RR S S S +S P+ R + + R+ S Sbjct: 609 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR 668 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSV-----PSPARRA-RSQSREE 441 +T SP+ R R + P RGA S PSP+ R R SR Sbjct: 669 STREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTP 728 Query: 442 QAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPAS 501 + + + S R S S +P+ P A+ P AP S V S SP +PA Sbjct: 729 EPKKIKKAASPSPQS--VRRVSSSRSVSGSPE-PAAKKPPAPP-SPVQSQSPSTNWSPAV 784 Query: 502 IFR-----TPLQLDPQQEQQ-------------------LFRRLEEEFLANARALEAVAS 537 + TP P+ Q ++ ++ A A A A+ Sbjct: 785 PVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAA 844 Query: 538 VTPTGPAP--------DPARAPDP 553 VTP A +P AP+P Sbjct: 845 VTPAAIAAATTTLAQEEPVAAPEP 868 Score = 43.9 bits (102), Expect = 5e-04 Identities = 90/401 (22%), Positives = 137/401 (34%), Gaps = 83/401 (20%) Query: 305 ASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQS 364 AS E + R + S R +E +P R R P PR R + S ++S Sbjct: 142 ASMKKQDEDKDKRDKEEKESSREKRERSRSPRR-RKSRSPSPRRRSSPVRRERKRSHSRS 200 Query: 365 GPLGTRSDDTGTGPRR--------------ERPSRRLTTGTP-----------ASPRRP- 398 T+S P + + PS + T T P+ P Sbjct: 201 PRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPS 260 Query: 399 PALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWV 458 P S+ ++ RPR + R+R++SR RR R S+ Sbjct: 261 PEKNSKKEKEKEKTRPRSRSRSKS----------RSRTRSRSPSHTRPRRRHRSRSRSYS 310 Query: 459 PRGRGSGGSGRSTP--QTPRARSPAAPRLSRVSSP-----------SPELGTTPASIFRT 505 PR R S R +P +TP R P PR R SP S ++ +S R+ Sbjct: 311 PRRRPS-PRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRS 369 Query: 506 PLQLDPQQEQQLFRRLEEEFLANARALEAVASV-----TPTGPAPDPARAPDPPAPDSAY 560 P + P++ R+ R L AS P+ PA P + P P Sbjct: 370 PPKKPPKRTSSPPRK--------TRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQ-- 419 Query: 561 CSSSSSSSSLSVLGGKCG------QPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGP 614 S+ + S +SV G+ + + + + P PR LS S ++ GG Sbjct: 420 -SNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEED------KGGK 472 Query: 615 LDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRR 655 + A S + R + R + D S P+R Sbjct: 473 MAAADS----VQQRRQYRRQNQQSSSDSGSSSSSEDERPKR 509 Score = 32.7 bits (73), Expect = 1.1 Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 13/136 (9%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPG---SERRGSRPEMTPVSLRSTK 329 P R + A P + + SP+ +P TS P G S +R P + +R Sbjct: 666 PSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVS 725 Query: 330 EGPETPPRPRDQLPPHPRSRRYSGDSDSSASS---------AQSGPLGTRSDDTGTGPRR 380 PE P + + P P+S R S S + S A P+ ++S T P Sbjct: 726 RTPE-PKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAV 784 Query: 381 ERPSRRLTTGTPASPR 396 + T +P+ PR Sbjct: 785 PVKKAKSPTPSPSPPR 800 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 62.4 bits (150), Expect = 1e-09 Identities = 99/382 (25%), Positives = 128/382 (33%), Gaps = 76/382 (19%) Query: 300 TSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRP--RDQLPPHPRSRRYSGDSDS 357 TS P P ER P+ PV GP+ PP P +D LP HP R +G Sbjct: 917 TSGGDGPPGPPGERGPQGPQ-GPVGF----PGPKGPPGPPGKDGLPGHPGQRGETGFQGK 971 Query: 358 SASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGA 417 + G +G + TGP ER G P P P +G Sbjct: 972 TGPPGPGGVVGPQGPTGETGPIGER-------GHPGPPGPPGE--------------QGL 1010 Query: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGS----GGSGRSTPQ 473 PG G + + P + S ++ A L R G+ +P +G+ GG G P Sbjct: 1011 PGAAGKEGAKGDPGPQGIS-GKDGPAGL---RGFPGERG-LPGAQGAPGLKGGEGPQGPP 1065 Query: 474 TP------RARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLA 527 P R + A + P P+ PA P + PQ A Sbjct: 1066 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP------------A 1113 Query: 528 NARALEAVASVT-PTGPAPDPARAPD------PPAPDSAYCSSSSSSSSLSVLGGKCGQP 580 ++ + P GPA P D P S + L G G P Sbjct: 1114 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1173 Query: 581 GDSGRTANGLPGPRSQA--LSSSSDEGSP-CPGMGGPLDAPGSPLACTEPSRTWARGRMD 637 G +G +G PGPR Q DEG+ PG GP+ G P G Sbjct: 1174 GIAG--GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLP---------GPPGEKG 1222 Query: 638 TQPDRKPSRIPTPRGPRRPSGP 659 D P P P GPR P GP Sbjct: 1223 ENGDVGPMGPPGPPGPRGPQGP 1244 Score = 41.6 bits (96), Expect = 0.002 Identities = 79/332 (23%), Positives = 108/332 (32%), Gaps = 55/332 (16%) Query: 351 YSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLD 410 + GD + G +G R +D GP+ R TG P P+ ++ + +L Sbjct: 800 FKGDMGLKGDRGEVGQIGPRGEDGPEGPK----GRAGPTGDPG-----PSGQAGEKGKLG 850 Query: 411 RGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG-RGSGG--- 466 G PG +G + S P + + + V R + PRG RG+ G Sbjct: 851 VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG 910 Query: 467 --------SGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLF 518 G P P R P P+ V P P+ P + L P Q Sbjct: 911 KPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPK--GPPGPPGKDGLPGHPGQ----- 962 Query: 519 RRLEEEFLANARALEAVASVTPTGPAPDPARA-----PDPPAPDSAYCSSSSSSSSLSVL 573 R E F V P GP + P PP P L Sbjct: 963 -RGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP--------PGEQGLPGA 1013 Query: 574 GGKCGQPGDSG-RTANGLPGPRSQALSSSSDEGSP----CPGMGGPLDAPGSPLACTEPS 628 GK G GD G + +G GP + + G P PG+ G G P P Sbjct: 1014 AGKEGAKGDPGPQGISGKDGP-AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG 1072 Query: 629 RTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 + G P +P GP+ P GPA Sbjct: 1073 ERGSAGTAG------PIGLPGRPGPQGPPGPA 1098 Score = 39.7 bits (91), Expect = 0.009 Identities = 91/386 (23%), Positives = 117/386 (30%), Gaps = 70/386 (18%) Query: 304 PASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQL-------PPHPRSRRYSGDSD 356 P PV RGS P+ L + GP+ PP P + P P R G Sbjct: 1064 PPGPVGSPGERGSAGTAGPIGLPG-RPGPQGPPGPAGEKGAPGEKGPQGPAGR--DGVQG 1120 Query: 357 SSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS--PRRPPALRSQSRDRLDRGRP 414 +GP G+ +D G E P ++ + G P PP L+ P Sbjct: 1121 PVGLPGPAGPAGSPGEDGDKGEIGE-PGQKGSKGDKGENGPPGPPGLQG----------P 1169 Query: 415 RGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG------------- 461 GAPG G P P R +Q + + D + P G Sbjct: 1170 VGAPGIAGGD-GEPGP--------RGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGE 1220 Query: 462 RGSGGS--GRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFR 519 +G G P P R P P + P G+ S+ + +P + Sbjct: 1221 KGENGDVGPMGPPGPPGPRGPQGP--NGADGPQGPPGSV-GSVGGVGEKGEPGEAGNPGP 1277 Query: 520 RLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQ 579 E P G A P A PP D + G G Sbjct: 1278 PGEAGVGGPKGERGEKGEAGPPGAAGPPG-AKGPPGDDGPKGNP-----------GPVGF 1325 Query: 580 PGDSGRTANGLPGPRSQA-----LSSSSDEGSPCP-GMGGPLDAPGSPLACTEPSRTWAR 633 PGD G G PGP Q D G P P G G PG P P A Sbjct: 1326 PGDPGPP--GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAE 1383 Query: 634 GRMDTQPDRKPSRIPTPRGPRRPSGP 659 GR + + + P G P GP Sbjct: 1384 GRQGEKGAKGEAGAEGPPGKTGPVGP 1409 Score = 39.3 bits (90), Expect = 0.012 Identities = 88/383 (22%), Positives = 120/383 (31%), Gaps = 59/383 (15%) Query: 302 PRPASPV-----PGSE-RRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPH--------PR 347 P P P+ PG +G ++ P+ GP PP PR P+ P Sbjct: 1203 PGPPGPIGLQGLPGPPGEKGENGDVGPM-------GPPGPPGPRGPQGPNGADGPQGPPG 1255 Query: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407 S G ++G G + GP+ ER + P PP + D Sbjct: 1256 SVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKG--EAGPPGAAGPPGAKGPPGD 1313 Query: 408 RLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSG 465 +G P G PG G P PA Q + + DG SG Sbjct: 1314 DGPKGNPGPVGFPGDPGPP-GEPGPAG---------QDGVGGDKGEDGDPGQPGPPGPSG 1363 Query: 466 GSGRSTPQTPRARSPAAPRLSR---------VSSPSPELGTTPASIFRTPLQLDPQQEQQ 516 +G P R AA R + P T P + P+ + Sbjct: 1364 EAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRG 1423 Query: 517 LFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGK 576 + + E+ L A + P GP P DP S L G Sbjct: 1424 IPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGLKGDP---------GSKGEKGHPGLIGL 1472 Query: 577 CGQPGDSGRTAN-GLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR 635 G PG+ G + GLPG +Q + +G PG GPL PG P +G Sbjct: 1473 IGPPGEQGEKGDRGLPG--TQGSPGAKGDGG-IPGPAGPLGPPGPPGLPGPQGPKGNKGS 1529 Query: 636 MDTQPDRKPSRIPTPRGPRRPSG 658 + S +P P G P G Sbjct: 1530 TGPAGQKGDSGLPGPPGSPGPPG 1552 Score = 35.0 bits (79), Expect = 0.23 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSG----RTANGLPGPRS 595 P GP P + P A + G G PGD G R G PGP Sbjct: 581 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 640 Query: 596 Q-ALSSSSDEGSP--CPGMGGP---LDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPT 649 + E P PG GP L G+P A +P G + + P P Sbjct: 641 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 700 Query: 650 PRGPRRPSGPAEL 662 P G + GP L Sbjct: 701 PPGQQGNPGPQGL 713 Score = 35.0 bits (79), Expect = 0.23 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 19/125 (15%) Query: 539 TPTGPA-PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTAN----GLPGP 593 TP P P A PP P G G+PG G+ N GLPGP Sbjct: 671 TPGAPGQPGMAGVDGPPGPKGNM--------------GPQGEPGPPGQQGNPGPQGLPGP 716 Query: 594 RSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGP 653 + PG+ G A G P + ++ +G + + P P PRG Sbjct: 717 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGV 776 Query: 654 RRPSG 658 + G Sbjct: 777 KGADG 781 Score = 32.7 bits (73), Expect = 1.1 Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 10/99 (10%) Query: 575 GKCGQPGDSGRTA-NGLPGPRSQALSSSSDEGSP----CPGMGGPLDA---PGSPLACTE 626 G+ G G GR G PGP QA G P PG GP + PG P A E Sbjct: 820 GEDGPEGPKGRAGPTGDPGPSGQA-GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGE 878 Query: 627 PSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG-PAELGT 664 G+ + R P+ RG R P+G P GT Sbjct: 879 KGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT 917 Score = 31.2 bits (69), Expect = 3.3 Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 20/97 (20%) Query: 578 GQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR-- 635 G PG G T G PGP SS + S PG GP G P +P + RGR Sbjct: 541 GPPGPMGLT--GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGK---RGRPG 595 Query: 636 ------MDTQPDRKPSR-------IPTPRGPRRPSGP 659 M +P K R +P +G R GP Sbjct: 596 ADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 632 Score = 30.4 bits (67), Expect = 5.6 Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 4/120 (3%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSS-SSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQAL 598 PTGP DP P P ++ +L + G G G T + +QA Sbjct: 473 PTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPT---ISAQEAQAQ 529 Query: 599 SSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG 658 + G GP+ G P P + A+G + P + P GP G Sbjct: 530 AILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPG 589 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 62.4 bits (150), Expect = 1e-09 Identities = 99/382 (25%), Positives = 128/382 (33%), Gaps = 76/382 (19%) Query: 300 TSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRP--RDQLPPHPRSRRYSGDSDS 357 TS P P ER P+ PV GP+ PP P +D LP HP R +G Sbjct: 866 TSGGDGPPGPPGERGPQGPQ-GPVGF----PGPKGPPGPPGKDGLPGHPGQRGETGFQGK 920 Query: 358 SASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGA 417 + G +G + TGP ER G P P P +G Sbjct: 921 TGPPGPGGVVGPQGPTGETGPIGER-------GHPGPPGPPGE--------------QGL 959 Query: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGS----GGSGRSTPQ 473 PG G + + P + S ++ A L R G+ +P +G+ GG G P Sbjct: 960 PGAAGKEGAKGDPGPQGIS-GKDGPAGL---RGFPGERG-LPGAQGAPGLKGGEGPQGPP 1014 Query: 474 TP------RARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLA 527 P R + A + P P+ PA P + PQ A Sbjct: 1015 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP------------A 1062 Query: 528 NARALEAVASVT-PTGPAPDPARAPD------PPAPDSAYCSSSSSSSSLSVLGGKCGQP 580 ++ + P GPA P D P S + L G G P Sbjct: 1063 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1122 Query: 581 GDSGRTANGLPGPRSQA--LSSSSDEGSP-CPGMGGPLDAPGSPLACTEPSRTWARGRMD 637 G +G +G PGPR Q DEG+ PG GP+ G P G Sbjct: 1123 GIAG--GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLP---------GPPGEKG 1171 Query: 638 TQPDRKPSRIPTPRGPRRPSGP 659 D P P P GPR P GP Sbjct: 1172 ENGDVGPMGPPGPPGPRGPQGP 1193 Score = 41.6 bits (96), Expect = 0.002 Identities = 79/332 (23%), Positives = 108/332 (32%), Gaps = 55/332 (16%) Query: 351 YSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLD 410 + GD + G +G R +D GP+ R TG P P+ ++ + +L Sbjct: 749 FKGDMGLKGDRGEVGQIGPRGEDGPEGPK----GRAGPTGDPG-----PSGQAGEKGKLG 799 Query: 411 RGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG-RGSGG--- 466 G PG +G + S P + + + V R + PRG RG+ G Sbjct: 800 VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG 859 Query: 467 --------SGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLF 518 G P P R P P+ V P P+ P + L P Q Sbjct: 860 KPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPK--GPPGPPGKDGLPGHPGQ----- 911 Query: 519 RRLEEEFLANARALEAVASVTPTGPAPDPARA-----PDPPAPDSAYCSSSSSSSSLSVL 573 R E F V P GP + P PP P L Sbjct: 912 -RGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP--------PGEQGLPGA 962 Query: 574 GGKCGQPGDSG-RTANGLPGPRSQALSSSSDEGSP----CPGMGGPLDAPGSPLACTEPS 628 GK G GD G + +G GP + + G P PG+ G G P P Sbjct: 963 AGKEGAKGDPGPQGISGKDGP-AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG 1021 Query: 629 RTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 + G P +P GP+ P GPA Sbjct: 1022 ERGSAGTAG------PIGLPGRPGPQGPPGPA 1047 Score = 39.7 bits (91), Expect = 0.009 Identities = 91/386 (23%), Positives = 117/386 (30%), Gaps = 70/386 (18%) Query: 304 PASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQL-------PPHPRSRRYSGDSD 356 P PV RGS P+ L + GP+ PP P + P P R G Sbjct: 1013 PPGPVGSPGERGSAGTAGPIGLPG-RPGPQGPPGPAGEKGAPGEKGPQGPAGR--DGVQG 1069 Query: 357 SSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS--PRRPPALRSQSRDRLDRGRP 414 +GP G+ +D G E P ++ + G P PP L+ P Sbjct: 1070 PVGLPGPAGPAGSPGEDGDKGEIGE-PGQKGSKGDKGENGPPGPPGLQG----------P 1118 Query: 415 RGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG------------- 461 GAPG G P P R +Q + + D + P G Sbjct: 1119 VGAPGIAGGD-GEPGP--------RGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGE 1169 Query: 462 RGSGGS--GRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFR 519 +G G P P R P P + P G+ S+ + +P + Sbjct: 1170 KGENGDVGPMGPPGPPGPRGPQGP--NGADGPQGPPGSV-GSVGGVGEKGEPGEAGNPGP 1226 Query: 520 RLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQ 579 E P G A P A PP D + G G Sbjct: 1227 PGEAGVGGPKGERGEKGEAGPPGAAGPPG-AKGPPGDDGPKGNP-----------GPVGF 1274 Query: 580 PGDSGRTANGLPGPRSQA-----LSSSSDEGSPCP-GMGGPLDAPGSPLACTEPSRTWAR 633 PGD G G PGP Q D G P P G G PG P P A Sbjct: 1275 PGDPGPP--GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAE 1332 Query: 634 GRMDTQPDRKPSRIPTPRGPRRPSGP 659 GR + + + P G P GP Sbjct: 1333 GRQGEKGAKGEAGAEGPPGKTGPVGP 1358 Score = 39.3 bits (90), Expect = 0.012 Identities = 88/383 (22%), Positives = 120/383 (31%), Gaps = 59/383 (15%) Query: 302 PRPASPV-----PGSE-RRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPH--------PR 347 P P P+ PG +G ++ P+ GP PP PR P+ P Sbjct: 1152 PGPPGPIGLQGLPGPPGEKGENGDVGPM-------GPPGPPGPRGPQGPNGADGPQGPPG 1204 Query: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407 S G ++G G + GP+ ER + P PP + D Sbjct: 1205 SVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKG--EAGPPGAAGPPGAKGPPGD 1262 Query: 408 RLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSG 465 +G P G PG G P PA Q + + DG SG Sbjct: 1263 DGPKGNPGPVGFPGDPGPP-GEPGPAG---------QDGVGGDKGEDGDPGQPGPPGPSG 1312 Query: 466 GSGRSTPQTPRARSPAAPRLSR---------VSSPSPELGTTPASIFRTPLQLDPQQEQQ 516 +G P R AA R + P T P + P+ + Sbjct: 1313 EAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRG 1372 Query: 517 LFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGK 576 + + E+ L A + P GP P DP S L G Sbjct: 1373 IPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGLKGDP---------GSKGEKGHPGLIGL 1421 Query: 577 CGQPGDSGRTAN-GLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR 635 G PG+ G + GLPG +Q + +G PG GPL PG P +G Sbjct: 1422 IGPPGEQGEKGDRGLPG--TQGSPGAKGDGG-IPGPAGPLGPPGPPGLPGPQGPKGNKGS 1478 Query: 636 MDTQPDRKPSRIPTPRGPRRPSG 658 + S +P P G P G Sbjct: 1479 TGPAGQKGDSGLPGPPGSPGPPG 1501 Score = 35.0 bits (79), Expect = 0.23 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSG----RTANGLPGPRS 595 P GP P + P A + G G PGD G R G PGP Sbjct: 530 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 589 Query: 596 Q-ALSSSSDEGSP--CPGMGGP---LDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPT 649 + E P PG GP L G+P A +P G + + P P Sbjct: 590 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 649 Query: 650 PRGPRRPSGPAEL 662 P G + GP L Sbjct: 650 PPGQQGNPGPQGL 662 Score = 35.0 bits (79), Expect = 0.23 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 19/125 (15%) Query: 539 TPTGPA-PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTAN----GLPGP 593 TP P P A PP P G G+PG G+ N GLPGP Sbjct: 620 TPGAPGQPGMAGVDGPPGPKGNM--------------GPQGEPGPPGQQGNPGPQGLPGP 665 Query: 594 RSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGP 653 + PG+ G A G P + ++ +G + + P P PRG Sbjct: 666 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGV 725 Query: 654 RRPSG 658 + G Sbjct: 726 KGADG 730 Score = 32.7 bits (73), Expect = 1.1 Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 10/99 (10%) Query: 575 GKCGQPGDSGRTA-NGLPGPRSQALSSSSDEGSP----CPGMGGPLDA---PGSPLACTE 626 G+ G G GR G PGP QA G P PG GP + PG P A E Sbjct: 769 GEDGPEGPKGRAGPTGDPGPSGQA-GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGE 827 Query: 627 PSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG-PAELGT 664 G+ + R P+ RG R P+G P GT Sbjct: 828 KGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT 866 Score = 31.2 bits (69), Expect = 3.3 Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 20/97 (20%) Query: 578 GQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR-- 635 G PG G T G PGP SS + S PG GP G P +P + RGR Sbjct: 490 GPPGPMGLT--GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGK---RGRPG 544 Query: 636 ------MDTQPDRKPSR-------IPTPRGPRRPSGP 659 M +P K R +P +G R GP Sbjct: 545 ADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 581 Score = 30.4 bits (67), Expect = 5.6 Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 4/120 (3%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSS-SSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQAL 598 PTGP DP P P ++ +L + G G G T + +QA Sbjct: 422 PTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPT---ISAQEAQAQ 478 Query: 599 SSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG 658 + G GP+ G P P + A+G + P + P GP G Sbjct: 479 AILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPG 538 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 62.4 bits (150), Expect = 1e-09 Identities = 99/382 (25%), Positives = 128/382 (33%), Gaps = 76/382 (19%) Query: 300 TSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRP--RDQLPPHPRSRRYSGDSDS 357 TS P P ER P+ PV GP+ PP P +D LP HP R +G Sbjct: 905 TSGGDGPPGPPGERGPQGPQ-GPVGF----PGPKGPPGPPGKDGLPGHPGQRGETGFQGK 959 Query: 358 SASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGA 417 + G +G + TGP ER G P P P +G Sbjct: 960 TGPPGPGGVVGPQGPTGETGPIGER-------GHPGPPGPPGE--------------QGL 998 Query: 418 PGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGS----GGSGRSTPQ 473 PG G + + P + S ++ A L R G+ +P +G+ GG G P Sbjct: 999 PGAAGKEGAKGDPGPQGIS-GKDGPAGL---RGFPGERG-LPGAQGAPGLKGGEGPQGPP 1053 Query: 474 TP------RARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLA 527 P R + A + P P+ PA P + PQ A Sbjct: 1054 GPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP------------A 1101 Query: 528 NARALEAVASVT-PTGPAPDPARAPD------PPAPDSAYCSSSSSSSSLSVLGGKCGQP 580 ++ + P GPA P D P S + L G G P Sbjct: 1102 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1161 Query: 581 GDSGRTANGLPGPRSQA--LSSSSDEGSP-CPGMGGPLDAPGSPLACTEPSRTWARGRMD 637 G +G +G PGPR Q DEG+ PG GP+ G P G Sbjct: 1162 GIAG--GDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLP---------GPPGEKG 1210 Query: 638 TQPDRKPSRIPTPRGPRRPSGP 659 D P P P GPR P GP Sbjct: 1211 ENGDVGPMGPPGPPGPRGPQGP 1232 Score = 41.6 bits (96), Expect = 0.002 Identities = 79/332 (23%), Positives = 108/332 (32%), Gaps = 55/332 (16%) Query: 351 YSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLD 410 + GD + G +G R +D GP+ R TG P P+ ++ + +L Sbjct: 788 FKGDMGLKGDRGEVGQIGPRGEDGPEGPK----GRAGPTGDPG-----PSGQAGEKGKLG 838 Query: 411 RGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG-RGSGG--- 466 G PG +G + S P + + + V R + PRG RG+ G Sbjct: 839 VPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG 898 Query: 467 --------SGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLF 518 G P P R P P+ V P P+ P + L P Q Sbjct: 899 KPGPKGTSGGDGPPGPPGERGPQGPQ-GPVGFPGPK--GPPGPPGKDGLPGHPGQ----- 950 Query: 519 RRLEEEFLANARALEAVASVTPTGPAPDPARA-----PDPPAPDSAYCSSSSSSSSLSVL 573 R E F V P GP + P PP P L Sbjct: 951 -RGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP--------PGEQGLPGA 1001 Query: 574 GGKCGQPGDSG-RTANGLPGPRSQALSSSSDEGSP----CPGMGGPLDAPGSPLACTEPS 628 GK G GD G + +G GP + + G P PG+ G G P P Sbjct: 1002 AGKEGAKGDPGPQGISGKDGP-AGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPG 1060 Query: 629 RTWARGRMDTQPDRKPSRIPTPRGPRRPSGPA 660 + G P +P GP+ P GPA Sbjct: 1061 ERGSAGTAG------PIGLPGRPGPQGPPGPA 1086 Score = 39.7 bits (91), Expect = 0.009 Identities = 91/386 (23%), Positives = 117/386 (30%), Gaps = 70/386 (18%) Query: 304 PASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQL-------PPHPRSRRYSGDSD 356 P PV RGS P+ L + GP+ PP P + P P R G Sbjct: 1052 PPGPVGSPGERGSAGTAGPIGLPG-RPGPQGPPGPAGEKGAPGEKGPQGPAGR--DGVQG 1108 Query: 357 SSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS--PRRPPALRSQSRDRLDRGRP 414 +GP G+ +D G E P ++ + G P PP L+ P Sbjct: 1109 PVGLPGPAGPAGSPGEDGDKGEIGE-PGQKGSKGDKGENGPPGPPGLQG----------P 1157 Query: 415 RGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRG------------- 461 GAPG G P P R +Q + + D + P G Sbjct: 1158 VGAPGIAGGD-GEPGP--------RGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGE 1208 Query: 462 RGSGGS--GRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFR 519 +G G P P R P P + P G+ S+ + +P + Sbjct: 1209 KGENGDVGPMGPPGPPGPRGPQGP--NGADGPQGPPGSV-GSVGGVGEKGEPGEAGNPGP 1265 Query: 520 RLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQ 579 E P G A P A PP D + G G Sbjct: 1266 PGEAGVGGPKGERGEKGEAGPPGAAGPPG-AKGPPGDDGPKGNP-----------GPVGF 1313 Query: 580 PGDSGRTANGLPGPRSQA-----LSSSSDEGSPCP-GMGGPLDAPGSPLACTEPSRTWAR 633 PGD G G PGP Q D G P P G G PG P P A Sbjct: 1314 PGDPGPP--GEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAE 1371 Query: 634 GRMDTQPDRKPSRIPTPRGPRRPSGP 659 GR + + + P G P GP Sbjct: 1372 GRQGEKGAKGEAGAEGPPGKTGPVGP 1397 Score = 39.3 bits (90), Expect = 0.012 Identities = 88/383 (22%), Positives = 120/383 (31%), Gaps = 59/383 (15%) Query: 302 PRPASPV-----PGSE-RRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPH--------PR 347 P P P+ PG +G ++ P+ GP PP PR P+ P Sbjct: 1191 PGPPGPIGLQGLPGPPGEKGENGDVGPM-------GPPGPPGPRGPQGPNGADGPQGPPG 1243 Query: 348 SRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRD 407 S G ++G G + GP+ ER + P PP + D Sbjct: 1244 SVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKG--EAGPPGAAGPPGAKGPPGD 1301 Query: 408 RLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSG 465 +G P G PG G P PA Q + + DG SG Sbjct: 1302 DGPKGNPGPVGFPGDPGPP-GEPGPAG---------QDGVGGDKGEDGDPGQPGPPGPSG 1351 Query: 466 GSGRSTPQTPRARSPAAPRLSR---------VSSPSPELGTTPASIFRTPLQLDPQQEQQ 516 +G P R AA R + P T P + P+ + Sbjct: 1352 EAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRG 1411 Query: 517 LFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGK 576 + + E+ L A + P GP P DP S L G Sbjct: 1412 IPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGLKGDP---------GSKGEKGHPGLIGL 1460 Query: 577 CGQPGDSGRTAN-GLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR 635 G PG+ G + GLPG +Q + +G PG GPL PG P +G Sbjct: 1461 IGPPGEQGEKGDRGLPG--TQGSPGAKGDGG-IPGPAGPLGPPGPPGLPGPQGPKGNKGS 1517 Query: 636 MDTQPDRKPSRIPTPRGPRRPSG 658 + S +P P G P G Sbjct: 1518 TGPAGQKGDSGLPGPPGSPGPPG 1540 Score = 35.0 bits (79), Expect = 0.23 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 10/133 (7%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSG----RTANGLPGPRS 595 P GP P + P A + G G PGD G R G PGP Sbjct: 569 PPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPG 628 Query: 596 Q-ALSSSSDEGSP--CPGMGGP---LDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPT 649 + E P PG GP L G+P A +P G + + P P Sbjct: 629 DDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPG 688 Query: 650 PRGPRRPSGPAEL 662 P G + GP L Sbjct: 689 PPGQQGNPGPQGL 701 Score = 35.0 bits (79), Expect = 0.23 Identities = 32/125 (25%), Positives = 43/125 (34%), Gaps = 19/125 (15%) Query: 539 TPTGPA-PDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTAN----GLPGP 593 TP P P A PP P G G+PG G+ N GLPGP Sbjct: 659 TPGAPGQPGMAGVDGPPGPKGNM--------------GPQGEPGPPGQQGNPGPQGLPGP 704 Query: 594 RSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGP 653 + PG+ G A G P + ++ +G + + P P PRG Sbjct: 705 QGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGV 764 Query: 654 RRPSG 658 + G Sbjct: 765 KGADG 769 Score = 32.7 bits (73), Expect = 1.1 Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 10/99 (10%) Query: 575 GKCGQPGDSGRTA-NGLPGPRSQALSSSSDEGSP----CPGMGGPLDA---PGSPLACTE 626 G+ G G GR G PGP QA G P PG GP + PG P A E Sbjct: 808 GEDGPEGPKGRAGPTGDPGPSGQA-GEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGE 866 Query: 627 PSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG-PAELGT 664 G+ + R P+ RG R P+G P GT Sbjct: 867 KGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGT 905 Score = 31.2 bits (69), Expect = 3.3 Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 20/97 (20%) Query: 578 GQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGR-- 635 G PG G T G PGP SS + S PG GP G P +P + RGR Sbjct: 529 GPPGPMGLT--GRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGK---RGRPG 583 Query: 636 ------MDTQPDRKPSR-------IPTPRGPRRPSGP 659 M +P K R +P +G R GP Sbjct: 584 ADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGP 620 Score = 30.4 bits (67), Expect = 5.6 Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 4/120 (3%) Query: 540 PTGPAPDPARAPDPPAPDSAYCSS-SSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQAL 598 PTGP DP P P ++ +L + G G G T + +QA Sbjct: 461 PTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPT---ISAQEAQAQ 517 Query: 599 SSSSDEGSPCPGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSG 658 + G GP+ G P P + A+G + P + P GP G Sbjct: 518 AILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPG 577 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 62.0 bits (149), Expect = 2e-09 Identities = 92/400 (23%), Positives = 136/400 (34%), Gaps = 70/400 (17%) Query: 284 PQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLP 343 P P V T + P TSP +P P P TP S K P TPP P Sbjct: 1287 PNPAVVTPPSPKGGPATSPPKGAPTP--------PAATPPS---PKGSPGTPPPKGAPTP 1335 Query: 344 PH--PRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPPAL 401 P P S + + ++ S++ GP S + T P + TP SP+R PA+ Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI 1395 Query: 402 RSQSRDRLDRG----RPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSW 457 S D P+ AP + +P++ + L + + Sbjct: 1396 PSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSL-----KKAPATS 1450 Query: 458 VPRGRGSGGSGRSTPQTPRA-----RSPAAPRLSRVSSPSPELGTTPASIFRTPLQL--- 509 P+G + S + P P + P AP+ SS + TPA + L Sbjct: 1451 APKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIP 1510 Query: 510 -DPQQEQQLFRRLEEEFLANARALE---------AVASVTPTGPAPDPARAPDPPAPDSA 559 P++ + A L A + P P P + P P P A Sbjct: 1511 SSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEA 1570 Query: 560 YCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPG 619 + SS +S P + T G P P+ + P P +AP Sbjct: 1571 PATPSSKEAS--------SPPAVTPSTYKGAPSPKELLI-------PPAVTSPSPKEAP- 1614 Query: 620 SPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGP 659 +P A T PS P++ P+ P P+G P+ P Sbjct: 1615 TPPAVTPPS-----------PEKGPA-TPAPKG--TPTSP 1640 Score = 59.7 bits (143), Expect = 9e-09 Identities = 106/409 (25%), Positives = 142/409 (34%), Gaps = 73/409 (17%) Query: 280 AHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRG---SRPEMTPVSLRST----KEGP 332 A P P+ SP SP +P P + P S + G P+ P +T K GP Sbjct: 921 ARATPAPKGIPASP---SPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977 Query: 333 ETP-----PRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 TP P P PP P+ G + S A + P T G+ P Sbjct: 978 ATPSPKGAPTPPAATPPSPK----GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS 1033 Query: 388 T--TGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVL 445 T TP SP+ PA P+GAP A L PSP + S + Sbjct: 1034 TPPAATPPSPKGSPAATP---------LPKGAPTTPAATL--PSPKGGPATPSLKGAPTP 1082 Query: 446 LVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRT 505 P+G + S + P P A +P +P+ + P TTPA+ + Sbjct: 1083 PAATPPS------PKGGPATPSPKGAPMPP-AATPPSPKGGLATPPHKGAPTTPAATPPS 1135 Query: 506 PLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPP--APDSAYCSS 563 P + LA A + T P+P A PP AP + + Sbjct: 1136 P----------------KGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP 1179 Query: 564 SSSSSSLSVLGGKCGQPGDSGRT----ANGL--PGPRSQALSSSSDEGSPCPGMG--GPL 615 S L+ K G P T GL P P+ + ++ SP G+ P Sbjct: 1180 PSPKGGLATPSPK-GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1238 Query: 616 DAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAELGT 664 AP +P A T PS +G T P P PTP PS L T Sbjct: 1239 GAPTTP-AATPPS---PKGGPATPP---PKGAPTPPAATPPSLKGGLAT 1280 Score = 56.6 bits (135), Expect = 7e-08 Identities = 96/392 (24%), Positives = 132/392 (33%), Gaps = 53/392 (13%) Query: 280 AHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPR 339 A PP P+ P SP +P P + P S + P TP ++ TPP P+ Sbjct: 990 AATPPSPKG---GPATPSPKGAPTPPAVTPPSPK--GSPAATPFPKGASTPPAATPPSPK 1044 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPA---SPR 396 P + ++ S + GP T P PS + TP+ +P Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104 Query: 397 RPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSP-ARRARSQSREEQAVLLVRRDRDGQH 455 P A + L +GAP A + PSP A + Sbjct: 1105 PPAATPPSPKGGLATPPHKGAPTTPAA--TPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1162 Query: 456 SWVPRGRGSGGSGRSTPQTPR----ARSP-AAPRLSRVSSPSPELG---TTPASIFRTPL 507 P +G+ + +TP +P+ SP AP + PSP+ G +P TP Sbjct: 1163 LATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1222 Query: 508 QLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSS 567 P + L A A TP P P P P P A +++ Sbjct: 1223 ATPPSPKGGL-----------ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATP 1271 Query: 568 SSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPC--PGMGGPLDAPGSPLACT 625 SL GG P G P P ++ S +G P P G P +P A T Sbjct: 1272 PSLK--GGLATPP------HKGAPNP--AVVTPPSPKGGPATSPPKGAP-----TPPAAT 1316 Query: 626 EPSRTWARGRMDTQPDRKPSRIPTPRGPRRPS 657 PS +G T P P PTP PS Sbjct: 1317 PPS---PKGSPGTPP---PKGAPTPPAVTPPS 1342 Score = 55.1 bits (131), Expect = 2e-07 Identities = 97/412 (23%), Positives = 138/412 (33%), Gaps = 63/412 (15%) Query: 277 SSTAHRPPQPR--VCTFSPQRVSPTTSPRPASP-----VPGSERRGSRPEMTPVSLRSTK 329 ++ A PP P+ + T SP+ T + P SP P + + P TP S K Sbjct: 1196 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP---PSPK 1252 Query: 330 EGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLT- 388 GP TPP PP G + P GP P T Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312 Query: 389 -TGTPASPR----RPPALRSQSRDRLDRGRPRGAP----------GGRGAQLSVPSPARR 433 TP SP+ PP + + + P+G P GG S P Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372 Query: 434 ARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSP 493 A + S + + + G +P +G S P +P+ ++PA P ++R + +P Sbjct: 1373 AATPSHKGGPAMTPPSPKRGPA--IPSPKGDPTSPAVIPLSPK-KAPATP-VTREGAATP 1428 Query: 494 ELG-TTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPD 552 G TP ++ TP+ L ++ + PT PA P + Sbjct: 1429 SKGDLTPPAV--TPVSL---------KKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE 1477 Query: 553 PPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMG 612 PPAP SSS + + P G A LP + SS E P Sbjct: 1478 PPAPKQVATSSSPKKAPAT--------PAPMG--APTLPA----VIPSSPKEVPATPSSR 1523 Query: 613 GPLDAPGSPL------ACTEPSRTWARGRMDTQPDRKPSRIPTPR-GPRRPS 657 AP + L A P M +K IPTP+ P PS Sbjct: 1524 RDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPS 1575 Score = 53.9 bits (128), Expect = 5e-07 Identities = 96/392 (24%), Positives = 137/392 (34%), Gaps = 97/392 (24%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRST------KEGPETPP 336 P P V SP++ T R + P S+ + P +TPVSL+ K GP TP Sbjct: 1402 PTSPAVIPLSPKKAPATPVTREGAATP-SKGDLTPPAVTPVSLKKAPATSAPKGGPATPS 1460 Query: 337 RPRDQL-----PPHPRS----RRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 D PP P+ ++ + S + A P+G + L Sbjct: 1461 SKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPT---------------L 1505 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV 447 P+SP+ PA S RD + AP LS +PA A ++ A+ Sbjct: 1506 PAVIPSSPKEVPATPSSRRDPI-------AP--TATLLSKKTPATLAPKEALIPPAMT-- 1554 Query: 448 RRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR-SPAAPRLSRVSSPSPELGTTPASIFRTP 506 VP S + TP P + +PA P SSP TP++ P Sbjct: 1555 ----------VP-------SPKKTPAIPTPKEAPATPSSKEASSPP---AVTPSTYKGAP 1594 Query: 507 LQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPA---PDPARAPDPPAPDSAYCS- 562 +E L PT PA P P + P PAP S Sbjct: 1595 SP--------------KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640 Query: 563 ----SSSSSSSLSVLGGKCGQPGDSGRTANGLP---GPRS--QALSSSSDEGSP---CPG 610 SS S S C + + GLP GP + + L + + E +P P Sbjct: 1641 PVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPT 1700 Query: 611 MGGP---LDAPGSPLACTEPS-RTWARGRMDT 638 GP + SP C +PS + ++G + T Sbjct: 1701 RKGPQTKKSSATSPPICPDPSAKNGSKGPLST 1732 Score = 48.1 bits (113), Expect = 3e-05 Identities = 93/418 (22%), Positives = 142/418 (33%), Gaps = 67/418 (16%) Query: 277 SSTAHRPPQPR--VCTFSPQRVSPTTSPRPASP-----VPGSERRGSRPEMTPVSLRS-- 327 ++ A PP P+ + T P+ T + P SP P + + P TP S + Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1186 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 P+ P PP P+ G + S A + P T G G P Sbjct: 1187 ATPSPKGAPTTPAATPPSPK----GGLATPSPKGAPTTPAATPPSPKG-GLATPSPKGAP 1241 Query: 388 TT--GTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGA-QLSVPSPARRARSQSREEQAV 444 TT TP SP+ PA P+GAP A S+ + AV Sbjct: 1242 TTPAATPPSPKGGPATPP----------PKGAPTPPAATPPSLKGGLATPPHKGAPNPAV 1291 Query: 445 LLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFR 504 + + G + P+G TP A +P +P+ SP GT P Sbjct: 1292 VTPPSPKGGPATSPPKG----------APTPPAATPPSPK----GSP----GTPPPKGAP 1333 Query: 505 TPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGP-APDPARAPDPPAPDSAYCSS 563 TP + P + L A + GP P P PPA ++ Sbjct: 1334 TPPAVTPPSPK------------GTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG 1381 Query: 564 SSSSSSLSVLGGKCGQP-GDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPL 622 + + G P GD A P+ + + EG+ P G +P+ Sbjct: 1382 PAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPV 1441 Query: 623 ACTE-PSRTWARGRMDTQPDRKPSRIP--TPRGPRRPSGPAELGTWHALHSVTPRAEP 677 + + P+ + +G T + +P TP P+ P P ++ T S +P+ P Sbjct: 1442 SLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVAT-----SSSPKKAP 1494 Score = 40.0 bits (92), Expect = 0.007 Identities = 85/369 (23%), Positives = 121/369 (32%), Gaps = 91/369 (24%) Query: 318 PEMTPVSLRSTKEGPETPPR-PRDQLPPH---PRSRRYSGDSDSSA-SSAQSGPLGTRSD 372 P+ T L + PE P P LPP P +++ G S +SA + S P ++ Sbjct: 714 PQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTE 773 Query: 373 DTGTGPRRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP-SPA 431 D+G S+ T SP S R + P LS P SP Sbjct: 774 DSGASATAS--SKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPV 831 Query: 432 RRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSP 491 + S++P S + +P T + +P P Sbjct: 832 ----------------------EASFLPENSLSFQGSKDSPATTHSPTP----------P 859 Query: 492 SPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPA---PDPA 548 SP+ TP+++ TPL + + + TPT P P Sbjct: 860 SPKGAPTPSAV--TPL--------------------SPKGVTLPPKETPTPSVVNLPFPK 897 Query: 549 RAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPC 608 P PAP A S +SSS + A P P+ +S S +G+P Sbjct: 898 EGPATPAPKQAPALSMTSSSP---------------KKARATPAPKG-IPASPSPKGAPT 941 Query: 609 PGMGGPLDAPGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAELGTWHAL 668 P P G P PS WA T P P P+P+G P T A Sbjct: 942 PPAATPPSPKGGP---ATPSPKWA----PTPPAATP---PSPKGGPATPSPKGAPTPPAA 991 Query: 669 HSVTPRAEP 677 +P+ P Sbjct: 992 TPPSPKGGP 1000 Score = 30.4 bits (67), Expect = 5.6 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 10/137 (7%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPR-PASPVPGSERR---GSRPEMTPVSLRST 328 P SS P P T P S PA P + + PE TP+ T Sbjct: 1641 PVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPT 1700 Query: 329 KEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLT 388 ++GP+T P P +G ++ A + L + D + T ++ Sbjct: 1701 RKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKD------A 1754 Query: 389 TGTPASPRRPPALRSQS 405 + +P P PP ++ + Sbjct: 1755 SHSPKGPLAPPESKAST 1771 >gi|189181724 proteoglycan 4 isoform D [Homo sapiens] Length = 1270 Score = 61.6 bits (148), Expect = 2e-09 Identities = 80/411 (19%), Positives = 149/411 (36%), Gaps = 39/411 (9%) Query: 272 DPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR----S 327 +P ++ P + +P+ +PTT +PA P + E TP + + + Sbjct: 277 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 336 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 TKE P P++ P P+ + + + ++ + T + + T P+ P+ Sbjct: 337 TKE--PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPT--T 392 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV 447 T P + + P ++S + P + P+ + + ++ A Sbjct: 393 TKSAPTTTKEPAPTTTKSAPTTPK-----EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 447 Query: 448 RRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIF-RTP 506 + P+ + + P TP+ +P P+ + ++P TTP + TP Sbjct: 448 KEPA----PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 503 Query: 507 LQLDPQQEQQLFRRLEEEFLANA------RALEAVASVTPTGPAPDPARAPDPPAPDSAY 560 + P ++L EE +A A TP PAP + P P P Sbjct: 504 EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 563 Query: 561 CSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQA-------LSSSSDEGSPCPGMGG 613 ++ ++ + G + T P P+ A S++ D+ +P G Sbjct: 564 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 623 Query: 614 PLDAPGSPLACT--EPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAEL 662 P P T EP+ T +G T + P P P++P+ P EL Sbjct: 624 APTTPKEPAPTTPKEPAPTTPKGTAPT-----TLKEPAPTTPKKPA-PKEL 668 Score = 42.4 bits (98), Expect = 0.001 Identities = 75/400 (18%), Positives = 132/400 (33%), Gaps = 54/400 (13%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P + + T + P P +P+ +PTT+ +PA P + E P + + Sbjct: 439 PKKPAPTTPKEPAPT----TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL---- 490 Query: 333 ETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTP 392 TP P P P + + + ++ + T + T P+ P+ P Sbjct: 491 -TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA-P 548 Query: 393 ASPRRP-PALRSQSRDRLDRGRPRGAPGGRG-AQLSVPSPARRARSQSREEQAVLLVRRD 450 +P+ P P + + P G L P+P + +E Sbjct: 549 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT------ 602 Query: 451 RDGQHSWVPRGRGSGGSGRSTPQTPRARSPA-----APRLSRVSSPSPELGTTPASIFR- 504 + S + P TP+ +P AP + +P+ GT P ++ Sbjct: 603 -------TTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEP 655 Query: 505 ---TPLQLDPQQEQQLFRRLEEEFLANARA---LEAVASVTPTGPAPDPARAPDPPAPDS 558 TP + P++ + ++ A + A TP PAP + P P P++ Sbjct: 656 APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPET 715 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 ++S S+ + T P +AL +S E P Sbjct: 716 PPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKE-------------P 762 Query: 619 GSPL----ACTEPSRTWARGRMDTQPDRKPSRIPTPRGPR 654 G P A T+P T T+ D + + T P+ Sbjct: 763 GVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPK 802 Score = 40.8 bits (94), Expect = 0.004 Identities = 68/374 (18%), Positives = 116/374 (31%), Gaps = 73/374 (19%) Query: 299 TTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSS 358 TT+ + G E+ S E + S K+ P + P P+ Sbjct: 155 TTTTNKQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKPTPK----------- 200 Query: 359 ASSAQSGP-LGTRSDDTGTGPRR------ERPSRRLTTGTPASPRRPPALRSQSRDRLDR 411 A + GP L T + T T P+ + P+ P +P+ P ++S + Sbjct: 201 AETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 260 Query: 412 GRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRST 471 P + P+ + + +E A + S Sbjct: 261 -----EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK---------------------SA 294 Query: 472 PQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARA 531 P TP+ +P P+ ++P TTP + P P++ A Sbjct: 295 PTTPKEPAPTTPKKPAPTTPKEPAPTTP----KEPTPTTPKEP--------------APT 336 Query: 532 LEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLP 591 + A TP PAP + P P P ++ + + P + T Sbjct: 337 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT---- 392 Query: 592 GPRSQALSSSSDEGSPCPGMGGPLDAPG-SPLACTEPSRTWARGRMDTQPDRKPSRIPTP 650 +++ +++ E +P P SP EP+ T + T P + P Sbjct: 393 ---TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 449 Query: 651 RGPRRPSGPAELGT 664 P P PA T Sbjct: 450 PAPTTPKEPAPTTT 463 Score = 39.7 bits (91), Expect = 0.009 Identities = 59/341 (17%), Positives = 115/341 (33%), Gaps = 46/341 (13%) Query: 335 PPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS 394 P PR LPP+ + + + + + ++ ++ T + T T + + S + T + Sbjct: 123 PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKT 182 Query: 395 PRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP------SPARRARSQSREEQAVLLVR 448 + A S+ L + P+ +G L+ P +P A + +E + Sbjct: 183 SAKDLAPTSKV---LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTI-- 237 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 +S P TP+ +P + + + P TT TP + Sbjct: 238 --------------------KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 277 Query: 509 LDPQQEQQLFRRLEEEFLANAR-----ALEAVASVTPTGPAPDPARAPDP-----PAPDS 558 P ++ + + + A TP PAP + P P PAP + Sbjct: 278 PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT 337 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 + ++ K P + P+ A +++ + P P Sbjct: 338 KEPAPTTPKEPAPTAPKK---PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 394 Query: 619 GSPLACTEPSRTWARGRMDT--QPDRKPSRIPTPRGPRRPS 657 +P EP+ T + T +P ++ P P P+ P+ Sbjct: 395 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 435 Score = 32.3 bits (72), Expect = 1.5 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 40/287 (13%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR---STKEGPETPPRPR 339 P +P T P+ +PTT PA P + ++ + E+ P + + ST P P+ Sbjct: 636 PKEPAPTT--PKGTAPTTLKEPA---PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPK 690 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 + P P+ + + ++ ++ P T T T ++ TT + P Sbjct: 691 ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPT------TTKEPTTIHKSPDESTP 744 Query: 400 ALRSQSRDRLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQ---------AVLLVR 448 L ++ + P+ G P + + P A+ ++ E A + Sbjct: 745 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 804 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 ++ + + + + T T + +P + ++ +P++ TT +I T + Sbjct: 805 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 864 Query: 509 LDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPD-PARAPDPP 554 P++ A+ + + T P P P +AP P Sbjct: 865 NKPEE--------------TAKPKDRATNSKATTPKPQKPTKAPKKP 897 >gi|189181722 proteoglycan 4 isoform C [Homo sapiens] Length = 1311 Score = 61.6 bits (148), Expect = 2e-09 Identities = 80/411 (19%), Positives = 149/411 (36%), Gaps = 39/411 (9%) Query: 272 DPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR----S 327 +P ++ P + +P+ +PTT +PA P + E TP + + + Sbjct: 318 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 377 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 TKE P P++ P P+ + + + ++ + T + + T P+ P+ Sbjct: 378 TKE--PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPT--T 433 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV 447 T P + + P ++S + P + P+ + + ++ A Sbjct: 434 TKSAPTTTKEPAPTTTKSAPTTPK-----EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 488 Query: 448 RRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIF-RTP 506 + P+ + + P TP+ +P P+ + ++P TTP + TP Sbjct: 489 KEPA----PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 544 Query: 507 LQLDPQQEQQLFRRLEEEFLANA------RALEAVASVTPTGPAPDPARAPDPPAPDSAY 560 + P ++L EE +A A TP PAP + P P P Sbjct: 545 EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 604 Query: 561 CSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQA-------LSSSSDEGSPCPGMGG 613 ++ ++ + G + T P P+ A S++ D+ +P G Sbjct: 605 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 664 Query: 614 PLDAPGSPLACT--EPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAEL 662 P P T EP+ T +G T + P P P++P+ P EL Sbjct: 665 APTTPKEPAPTTPKEPAPTTPKGTAPT-----TLKEPAPTTPKKPA-PKEL 709 Score = 42.4 bits (98), Expect = 0.001 Identities = 75/400 (18%), Positives = 132/400 (33%), Gaps = 54/400 (13%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P + + T + P P +P+ +PTT+ +PA P + E P + + Sbjct: 480 PKKPAPTTPKEPAPT----TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL---- 531 Query: 333 ETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTP 392 TP P P P + + + ++ + T + T P+ P+ P Sbjct: 532 -TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA-P 589 Query: 393 ASPRRP-PALRSQSRDRLDRGRPRGAPGGRG-AQLSVPSPARRARSQSREEQAVLLVRRD 450 +P+ P P + + P G L P+P + +E Sbjct: 590 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT------ 643 Query: 451 RDGQHSWVPRGRGSGGSGRSTPQTPRARSPA-----APRLSRVSSPSPELGTTPASIFR- 504 + S + P TP+ +P AP + +P+ GT P ++ Sbjct: 644 -------TTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEP 696 Query: 505 ---TPLQLDPQQEQQLFRRLEEEFLANARA---LEAVASVTPTGPAPDPARAPDPPAPDS 558 TP + P++ + ++ A + A TP PAP + P P P++ Sbjct: 697 APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPET 756 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 ++S S+ + T P +AL +S E P Sbjct: 757 PPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKE-------------P 803 Query: 619 GSPL----ACTEPSRTWARGRMDTQPDRKPSRIPTPRGPR 654 G P A T+P T T+ D + + T P+ Sbjct: 804 GVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPK 843 Score = 40.8 bits (94), Expect = 0.004 Identities = 68/374 (18%), Positives = 116/374 (31%), Gaps = 73/374 (19%) Query: 299 TTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSS 358 TT+ + G E+ S E + S K+ P + P P+ Sbjct: 196 TTTTNKQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKPTPK----------- 241 Query: 359 ASSAQSGP-LGTRSDDTGTGPRR------ERPSRRLTTGTPASPRRPPALRSQSRDRLDR 411 A + GP L T + T T P+ + P+ P +P+ P ++S + Sbjct: 242 AETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 301 Query: 412 GRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRST 471 P + P+ + + +E A + S Sbjct: 302 -----EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK---------------------SA 335 Query: 472 PQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARA 531 P TP+ +P P+ ++P TTP + P P++ A Sbjct: 336 PTTPKEPAPTTPKKPAPTTPKEPAPTTP----KEPTPTTPKEP--------------APT 377 Query: 532 LEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLP 591 + A TP PAP + P P P ++ + + P + T Sbjct: 378 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT---- 433 Query: 592 GPRSQALSSSSDEGSPCPGMGGPLDAPG-SPLACTEPSRTWARGRMDTQPDRKPSRIPTP 650 +++ +++ E +P P SP EP+ T + T P + P Sbjct: 434 ---TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 490 Query: 651 RGPRRPSGPAELGT 664 P P PA T Sbjct: 491 PAPTTPKEPAPTTT 504 Score = 39.7 bits (91), Expect = 0.009 Identities = 59/341 (17%), Positives = 115/341 (33%), Gaps = 46/341 (13%) Query: 335 PPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPAS 394 P PR LPP+ + + + + + ++ ++ T + T T + + S + T + Sbjct: 164 PINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKT 223 Query: 395 PRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP------SPARRARSQSREEQAVLLVR 448 + A S+ L + P+ +G L+ P +P A + +E + Sbjct: 224 SAKDLAPTSKV---LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTI-- 278 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 +S P TP+ +P + + + P TT TP + Sbjct: 279 --------------------KSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 318 Query: 509 LDPQQEQQLFRRLEEEFLANAR-----ALEAVASVTPTGPAPDPARAPDP-----PAPDS 558 P ++ + + + A TP PAP + P P PAP + Sbjct: 319 PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTT 378 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 + ++ K P + P+ A +++ + P P Sbjct: 379 KEPAPTTPKEPAPTAPKK---PAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 435 Query: 619 GSPLACTEPSRTWARGRMDT--QPDRKPSRIPTPRGPRRPS 657 +P EP+ T + T +P ++ P P P+ P+ Sbjct: 436 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 476 Score = 32.3 bits (72), Expect = 1.5 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 40/287 (13%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR---STKEGPETPPRPR 339 P +P T P+ +PTT PA P + ++ + E+ P + + ST P P+ Sbjct: 677 PKEPAPTT--PKGTAPTTLKEPA---PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPK 731 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 + P P+ + + ++ ++ P T T T ++ TT + P Sbjct: 732 ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPT------TTKEPTTIHKSPDESTP 785 Query: 400 ALRSQSRDRLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQ---------AVLLVR 448 L ++ + P+ G P + + P A+ ++ E A + Sbjct: 786 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 845 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 ++ + + + + T T + +P + ++ +P++ TT +I T + Sbjct: 846 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 905 Query: 509 LDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPD-PARAPDPP 554 P++ A+ + + T P P P +AP P Sbjct: 906 NKPEE--------------TAKPKDRATNSKATTPKPQKPTKAPKKP 938 >gi|189181720 proteoglycan 4 isoform B [Homo sapiens] Length = 1363 Score = 61.6 bits (148), Expect = 2e-09 Identities = 80/411 (19%), Positives = 149/411 (36%), Gaps = 39/411 (9%) Query: 272 DPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR----S 327 +P ++ P + +P+ +PTT +PA P + E TP + + + Sbjct: 370 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 429 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 TKE P P++ P P+ + + + ++ + T + + T P+ P+ Sbjct: 430 TKE--PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPT--T 485 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV 447 T P + + P ++S + P + P+ + + ++ A Sbjct: 486 TKSAPTTTKEPAPTTTKSAPTTPK-----EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 540 Query: 448 RRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIF-RTP 506 + P+ + + P TP+ +P P+ + ++P TTP + TP Sbjct: 541 KEPA----PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 596 Query: 507 LQLDPQQEQQLFRRLEEEFLANA------RALEAVASVTPTGPAPDPARAPDPPAPDSAY 560 + P ++L EE +A A TP PAP + P P P Sbjct: 597 EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 656 Query: 561 CSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQA-------LSSSSDEGSPCPGMGG 613 ++ ++ + G + T P P+ A S++ D+ +P G Sbjct: 657 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 716 Query: 614 PLDAPGSPLACT--EPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAEL 662 P P T EP+ T +G T + P P P++P+ P EL Sbjct: 717 APTTPKEPAPTTPKEPAPTTPKGTAPT-----TLKEPAPTTPKKPA-PKEL 761 Score = 42.4 bits (98), Expect = 0.001 Identities = 75/400 (18%), Positives = 132/400 (33%), Gaps = 54/400 (13%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P + + T + P P +P+ +PTT+ +PA P + E P + + Sbjct: 532 PKKPAPTTPKEPAPT----TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL---- 583 Query: 333 ETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTP 392 TP P P P + + + ++ + T + T P+ P+ P Sbjct: 584 -TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA-P 641 Query: 393 ASPRRP-PALRSQSRDRLDRGRPRGAPGGRG-AQLSVPSPARRARSQSREEQAVLLVRRD 450 +P+ P P + + P G L P+P + +E Sbjct: 642 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT------ 695 Query: 451 RDGQHSWVPRGRGSGGSGRSTPQTPRARSPA-----APRLSRVSSPSPELGTTPASIFR- 504 + S + P TP+ +P AP + +P+ GT P ++ Sbjct: 696 -------TTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEP 748 Query: 505 ---TPLQLDPQQEQQLFRRLEEEFLANARA---LEAVASVTPTGPAPDPARAPDPPAPDS 558 TP + P++ + ++ A + A TP PAP + P P P++ Sbjct: 749 APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPET 808 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 ++S S+ + T P +AL +S E P Sbjct: 809 PPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKE-------------P 855 Query: 619 GSPL----ACTEPSRTWARGRMDTQPDRKPSRIPTPRGPR 654 G P A T+P T T+ D + + T P+ Sbjct: 856 GVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPK 895 Score = 41.2 bits (95), Expect = 0.003 Identities = 70/411 (17%), Positives = 136/411 (33%), Gaps = 58/411 (14%) Query: 277 SSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRG--------SRPEMTPVSLRST 328 +S A+R Q ++ ++ P P PV G + P+ + Sbjct: 146 NSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKV 205 Query: 329 KEGPET----PPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPS 384 P+ P PR LPP+ + + + + + ++ ++ T + T T + + S Sbjct: 206 STSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTS 265 Query: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP------SPARRARSQS 438 + T + + A S+ L + P+ +G L+ P +P A + Sbjct: 266 AKETQSIEKTSAKDLAPTSKV---LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTP 322 Query: 439 REEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTT 498 +E + +S P TP+ +P + + + P TT Sbjct: 323 KEPTPTTI----------------------KSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 360 Query: 499 PASIFRTPLQLDPQQEQQLFRRLEEEFLANAR-----ALEAVASVTPTGPAPDPARAPDP 553 TP + P ++ + + + A TP PAP + P P Sbjct: 361 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTP 420 Query: 554 -----PAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPC 608 PAP + + ++ K P + P+ A +++ + Sbjct: 421 TTPKEPAPTTKEPAPTTPKEPAPTAPKK---PAPTTPKEPAPTTPKEPAPTTTKEPSPTT 477 Query: 609 PGMGGPLDAPGSPLACTEPSRTWARGRMDT--QPDRKPSRIPTPRGPRRPS 657 P P +P EP+ T + T +P ++ P P P+ P+ Sbjct: 478 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 528 Score = 40.8 bits (94), Expect = 0.004 Identities = 68/374 (18%), Positives = 116/374 (31%), Gaps = 73/374 (19%) Query: 299 TTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSS 358 TT+ + G E+ S E + S K+ P + P P+ Sbjct: 248 TTTTNKQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKPTPK----------- 293 Query: 359 ASSAQSGP-LGTRSDDTGTGPRR------ERPSRRLTTGTPASPRRPPALRSQSRDRLDR 411 A + GP L T + T T P+ + P+ P +P+ P ++S + Sbjct: 294 AETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 353 Query: 412 GRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRST 471 P + P+ + + +E A + S Sbjct: 354 -----EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK---------------------SA 387 Query: 472 PQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARA 531 P TP+ +P P+ ++P TTP + P P++ A Sbjct: 388 PTTPKEPAPTTPKKPAPTTPKEPAPTTP----KEPTPTTPKEP--------------APT 429 Query: 532 LEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLP 591 + A TP PAP + P P P ++ + + P + T Sbjct: 430 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT---- 485 Query: 592 GPRSQALSSSSDEGSPCPGMGGPLDAPG-SPLACTEPSRTWARGRMDTQPDRKPSRIPTP 650 +++ +++ E +P P SP EP+ T + T P + P Sbjct: 486 ---TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 542 Query: 651 RGPRRPSGPAELGT 664 P P PA T Sbjct: 543 PAPTTPKEPAPTTT 556 Score = 32.3 bits (72), Expect = 1.5 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 40/287 (13%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR---STKEGPETPPRPR 339 P +P T P+ +PTT PA P + ++ + E+ P + + ST P P+ Sbjct: 729 PKEPAPTT--PKGTAPTTLKEPA---PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPK 783 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 + P P+ + + ++ ++ P T T T ++ TT + P Sbjct: 784 ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPT------TTKEPTTIHKSPDESTP 837 Query: 400 ALRSQSRDRLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQ---------AVLLVR 448 L ++ + P+ G P + + P A+ ++ E A + Sbjct: 838 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 897 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 ++ + + + + T T + +P + ++ +P++ TT +I T + Sbjct: 898 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 957 Query: 509 LDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPD-PARAPDPP 554 P++ A+ + + T P P P +AP P Sbjct: 958 NKPEE--------------TAKPKDRATNSKATTPKPQKPTKAPKKP 990 >gi|67190163 proteoglycan 4 isoform A [Homo sapiens] Length = 1404 Score = 61.6 bits (148), Expect = 2e-09 Identities = 80/411 (19%), Positives = 149/411 (36%), Gaps = 39/411 (9%) Query: 272 DPCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR----S 327 +P ++ P + +P+ +PTT +PA P + E TP + + + Sbjct: 411 EPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 470 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 TKE P P++ P P+ + + + ++ + T + + T P+ P+ Sbjct: 471 TKE--PAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPT--T 526 Query: 388 TTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV 447 T P + + P ++S + P + P+ + + ++ A Sbjct: 527 TKSAPTTTKEPAPTTTKSAPTTPK-----EPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 581 Query: 448 RRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIF-RTP 506 + P+ + + P TP+ +P P+ + ++P TTP + TP Sbjct: 582 KEPA----PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 637 Query: 507 LQLDPQQEQQLFRRLEEEFLANA------RALEAVASVTPTGPAPDPARAPDPPAPDSAY 560 + P ++L EE +A A TP PAP + P P P Sbjct: 638 EKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPA 697 Query: 561 CSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQA-------LSSSSDEGSPCPGMGG 613 ++ ++ + G + T P P+ A S++ D+ +P G Sbjct: 698 PTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT 757 Query: 614 PLDAPGSPLACT--EPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAEL 662 P P T EP+ T +G T + P P P++P+ P EL Sbjct: 758 APTTPKEPAPTTPKEPAPTTPKGTAPT-----TLKEPAPTTPKKPA-PKEL 802 Score = 42.4 bits (98), Expect = 0.001 Identities = 75/400 (18%), Positives = 132/400 (33%), Gaps = 54/400 (13%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P + + T + P P +P+ +PTT+ +PA P + E P + + Sbjct: 573 PKKPAPTTPKEPAPT----TPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKL---- 624 Query: 333 ETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTP 392 TP P P P + + + ++ + T + T P+ P+ P Sbjct: 625 -TPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA-P 682 Query: 393 ASPRRP-PALRSQSRDRLDRGRPRGAPGGRG-AQLSVPSPARRARSQSREEQAVLLVRRD 450 +P+ P P + + P G L P+P + +E Sbjct: 683 TTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT------ 736 Query: 451 RDGQHSWVPRGRGSGGSGRSTPQTPRARSPA-----APRLSRVSSPSPELGTTPASIFR- 504 + S + P TP+ +P AP + +P+ GT P ++ Sbjct: 737 -------TTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEP 789 Query: 505 ---TPLQLDPQQEQQLFRRLEEEFLANARA---LEAVASVTPTGPAPDPARAPDPPAPDS 558 TP + P++ + ++ A + A TP PAP + P P P++ Sbjct: 790 APTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPET 849 Query: 559 AYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAP 618 ++S S+ + T P +AL +S E P Sbjct: 850 PPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKE-------------P 896 Query: 619 GSPL----ACTEPSRTWARGRMDTQPDRKPSRIPTPRGPR 654 G P A T+P T T+ D + + T P+ Sbjct: 897 GVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPK 936 Score = 41.2 bits (95), Expect = 0.003 Identities = 70/411 (17%), Positives = 136/411 (33%), Gaps = 58/411 (14%) Query: 277 SSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRG--------SRPEMTPVSLRST 328 +S A+R Q ++ ++ P P PV G + P+ + Sbjct: 187 NSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKV 246 Query: 329 KEGPET----PPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPS 384 P+ P PR LPP+ + + + + + ++ ++ T + T T + + S Sbjct: 247 STSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTS 306 Query: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVP------SPARRARSQS 438 + T + + A S+ L + P+ +G L+ P +P A + Sbjct: 307 AKETQSIEKTSAKDLAPTSKV---LAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTP 363 Query: 439 REEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTT 498 +E + +S P TP+ +P + + + P TT Sbjct: 364 KEPTPTTI----------------------KSAPTTPKEPAPTTTKSAPTTPKEPAPTTT 401 Query: 499 PASIFRTPLQLDPQQEQQLFRRLEEEFLANAR-----ALEAVASVTPTGPAPDPARAPDP 553 TP + P ++ + + + A TP PAP + P P Sbjct: 402 KEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTP 461 Query: 554 -----PAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPC 608 PAP + + ++ K P + P+ A +++ + Sbjct: 462 TTPKEPAPTTKEPAPTTPKEPAPTAPKK---PAPTTPKEPAPTTPKEPAPTTTKEPSPTT 518 Query: 609 PGMGGPLDAPGSPLACTEPSRTWARGRMDT--QPDRKPSRIPTPRGPRRPS 657 P P +P EP+ T + T +P ++ P P P+ P+ Sbjct: 519 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 569 Score = 40.8 bits (94), Expect = 0.004 Identities = 68/374 (18%), Positives = 116/374 (31%), Gaps = 73/374 (19%) Query: 299 TTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDSDSS 358 TT+ + G E+ S E + S K+ P + P P+ Sbjct: 289 TTTTNKQTSTDGKEKTTSAKETQSIEKTSAKD---LAPTSKVLAKPTPK----------- 334 Query: 359 ASSAQSGP-LGTRSDDTGTGPRR------ERPSRRLTTGTPASPRRPPALRSQSRDRLDR 411 A + GP L T + T T P+ + P+ P +P+ P ++S + Sbjct: 335 AETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPK 394 Query: 412 GRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRST 471 P + P+ + + +E A + S Sbjct: 395 -----EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTK---------------------SA 428 Query: 472 PQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARA 531 P TP+ +P P+ ++P TTP + P P++ A Sbjct: 429 PTTPKEPAPTTPKKPAPTTPKEPAPTTP----KEPTPTTPKEP--------------APT 470 Query: 532 LEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLP 591 + A TP PAP + P P P ++ + + P + T Sbjct: 471 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTT---- 526 Query: 592 GPRSQALSSSSDEGSPCPGMGGPLDAPG-SPLACTEPSRTWARGRMDTQPDRKPSRIPTP 650 +++ +++ E +P P SP EP+ T + T P + P Sbjct: 527 ---TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 583 Query: 651 RGPRRPSGPAELGT 664 P P PA T Sbjct: 584 PAPTTPKEPAPTTT 597 Score = 32.3 bits (72), Expect = 1.5 Identities = 50/287 (17%), Positives = 104/287 (36%), Gaps = 40/287 (13%) Query: 283 PPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLR---STKEGPETPPRPR 339 P +P T P+ +PTT PA P + ++ + E+ P + + ST P P+ Sbjct: 770 PKEPAPTT--PKGTAPTTLKEPA---PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPK 824 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 + P P+ + + ++ ++ P T T T ++ TT + P Sbjct: 825 ETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPT------TTKEPTTIHKSPDESTP 878 Query: 400 ALRSQSRDRLDRGRPR--GAPGGRGAQLSVPSPARRARSQSREEQ---------AVLLVR 448 L ++ + P+ G P + + P A+ ++ E A + Sbjct: 879 ELSAEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMT 938 Query: 449 RDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQ 508 ++ + + + + T T + +P + ++ +P++ TT +I T + Sbjct: 939 KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIM 998 Query: 509 LDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPD-PARAPDPP 554 P++ A+ + + T P P P +AP P Sbjct: 999 NKPEE--------------TAKPKDRATNSKATTPKPQKPTKAPKKP 1031 >gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] Length = 1120 Score = 59.7 bits (143), Expect = 9e-09 Identities = 111/450 (24%), Positives = 140/450 (31%), Gaps = 100/450 (22%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P CSS + P P V + PQ P+SP PG P P + P Sbjct: 658 PKLCSSLPGQGPPPYVFMY-PQG-------SPSSPAPGP------PPGAPWAFSYLAGPP 703 Query: 333 ETPPRPRDQLPPHPRSRRYS----GDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLT 388 TPP P P P+ R +S G ++ A GP+G+ T RR S + Sbjct: 704 ATPPDP-----PRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVR 758 Query: 389 T----------GTPAS-----------PRRPPALR-------SQSRDRLDR--GRPRGAP 418 T GTP S P PP R S LD G GA Sbjct: 759 TSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGAT 818 Query: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR 478 G R LS P+ + G P RGS G G + Sbjct: 819 GPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEG-TPPSRGSSGEGLPFAEEGNLT 877 Query: 479 SPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASV 538 P+ + P P P + + D + + R E E L A VAS Sbjct: 878 IKQRPK---PAGPPPRETPVPPGLDFNLTESDTVKRRPKCR--EREPLQTALLAFGVASA 932 Query: 539 TP--TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQ 596 TP P P P PPA SSL QP S A G+P P + Sbjct: 933 TPGPAAPLPSPTPGESPPA------------SSLP-------QPEPSSLPAQGVPTPLAP 973 Query: 597 ALSSSSDEGSPCPGMG----------GPLDAPGSPLA---------CTEPSRTWARGRMD 637 + + PCPG G G + P +P A +P Sbjct: 974 S-PAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAF 1032 Query: 638 TQPDRKPSRIPTPRGPRRPSGPAELGTWHA 667 + P P P P P RP +G A Sbjct: 1033 SGPKLAPRLGPRPVPPPRPESTGTVGPGQA 1062 >gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] Length = 1202 Score = 59.7 bits (143), Expect = 9e-09 Identities = 111/450 (24%), Positives = 140/450 (31%), Gaps = 100/450 (22%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQRVSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGP 332 P CSS + P P V + PQ P+SP PG P P + P Sbjct: 740 PKLCSSLPGQGPPPYVFMY-PQG-------SPSSPAPGP------PPGAPWAFSYLAGPP 785 Query: 333 ETPPRPRDQLPPHPRSRRYS----GDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLT 388 TPP P P P+ R +S G ++ A GP+G+ T RR S + Sbjct: 786 ATPPDP-----PRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTRRPGRSALVR 840 Query: 389 T----------GTPAS-----------PRRPPALR-------SQSRDRLDR--GRPRGAP 418 T GTP S P PP R S LD G GA Sbjct: 841 TSPSVTPTPARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPEPPPLDESPGPKEGAT 900 Query: 419 GGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQTPRAR 478 G R LS P+ + G P RGS G G + Sbjct: 901 GPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEG-TPPSRGSSGEGLPFAEEGNLT 959 Query: 479 SPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASV 538 P+ + P P P + + D + + R E E L A VAS Sbjct: 960 IKQRPK---PAGPPPRETPVPPGLDFNLTESDTVKRRPKCR--EREPLQTALLAFGVASA 1014 Query: 539 TP--TGPAPDPARAPDPPAPDSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQ 596 TP P P P PPA SSL QP S A G+P P + Sbjct: 1015 TPGPAAPLPSPTPGESPPA------------SSLP-------QPEPSSLPAQGVPTPLAP 1055 Query: 597 ALSSSSDEGSPCPGMG----------GPLDAPGSPLA---------CTEPSRTWARGRMD 637 + + PCPG G G + P +P A +P Sbjct: 1056 S-PAMQPPVPPCPGPGLESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSVACTQLAF 1114 Query: 638 TQPDRKPSRIPTPRGPRRPSGPAELGTWHA 667 + P P P P P RP +G A Sbjct: 1115 SGPKLAPRLGPRPVPPPRPESTGTVGPGQA 1144 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 58.5 bits (140), Expect = 2e-08 Identities = 130/517 (25%), Positives = 175/517 (33%), Gaps = 120/517 (23%) Query: 165 ERELRAAPPAPNAPAAGEDTTETAPAPGTPARGPRMTPSDLRNLDELVREILGRCTCPDQ 224 +R+ A A PAA T PG+P P +TP+ LR +LG + Sbjct: 4 KRDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALR--------VLGAAGAVGR 55 Query: 225 FPMIKVSEGKYRVGDSSLLIFVRVLRSHVMVRVGG-GWDTLEHYLDKHDPCRCSSTAHRP 283 P+ + R GG G T+ + P R + T+ R Sbjct: 56 KPLAE--------------------------RAGGIGGATIPESAPRAGPTRSAGTSSRN 89 Query: 284 PQPR-VCTFSPQRVSP--TTSPRPASPVPGSERRGSRP-EMTPVSLRSTKEGPETPPRPR 339 P R + +R P TSP P S PG +RP + LR + E ET R + Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSS-PGRASGTTRPGPLGQKGLRISAE--ETVARGK 146 Query: 340 DQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRLTTGTPASPRRPP 399 P SA SA G R D +G P GTP+ P Sbjct: 147 ATEAP-----------KRSALSA-----GARRDTSGPTP-----------GTPS-----P 174 Query: 400 ALRSQSRDR-LDRGRPRGAPGGR------GAQLSVPSPARRARSQSREEQAVLLVRRDRD 452 A+ +SR + G PR AP R G + SV S A S E + RR Sbjct: 175 AMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSS----ASEHSTTEPSPAARRRPSA 230 Query: 453 GQHSWVPRGRG-------------SGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTP 499 G P R SG S R TP+ P P+ P+ + + P T P Sbjct: 231 GGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP--AHPSQPKPKGLQALRPPQVTPP 288 Query: 500 ---ASIFRTPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAP 556 A+ PL P L+ + A +S+T P P P P AP Sbjct: 289 RKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAP 348 Query: 557 DSAYCSSSSSSSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLD 616 S S ++ S G P T + LP P L++ + P + PL Sbjct: 349 PSLQTLPSPPATPPSQATTSLGSP-TLQATHSFLPSPPLSPLATPPPQAPPALAL-PPLQ 406 Query: 617 APGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGP 653 AP SP A P P P+P+ P Sbjct: 407 APPSPPA---------------SPPLSPLATPSPQAP 428 Score = 49.3 bits (116), Expect = 1e-05 Identities = 75/286 (26%), Positives = 95/286 (33%), Gaps = 42/286 (14%) Query: 406 RDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLLV--RRDRDGQHSWVPRGRG 463 RD+ G P R L P P R A L V G+ R G Sbjct: 5 RDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64 Query: 464 SGG--------------SGRSTPQTPRARSPAAPRLSRV-----SSPSPELGTTPASIFR 504 GG S ++ + P +R PA+ R R +SP P AS Sbjct: 65 IGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124 Query: 505 TPLQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSS 564 P L Q+ R EE +A +A EA + A P P P A S Sbjct: 125 RPGPLG----QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRS 180 Query: 565 SSSSSLSVLGGKCGQPGDSGRTANGLPGPR---SQALSSSSDEGSPC----PGMGGPLDA 617 ++ + L +P S R GPR S A S+ E SP P GG L Sbjct: 181 RAAGTEVGLP----RPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR 236 Query: 618 PGSPLACTEPSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAELG 663 P S + + + R PS TPR P PS P G Sbjct: 237 PASRSLSSSATPLSSPARSG------PSARGTPRAPAHPSQPKPKG 276 Score = 37.7 bits (86), Expect = 0.035 Identities = 86/395 (21%), Positives = 128/395 (32%), Gaps = 61/395 (15%) Query: 273 PCRCSSTAHRPPQPRVCTFSPQR-VSPTTSPRPASP----VPGSERRGSRPEMTPVSLRS 327 P + +++ P +F P +SP +P P +P +P + S P P+S + Sbjct: 362 PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLA 421 Query: 328 TKEGPETPPRPRDQLPPHPRSRRYSGDSDSSASSAQSGPLGTRSDDTGTGPRRERPSRRL 387 T P+ + L H +S + S P + T P + PS Sbjct: 422 TPS-----PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAA 476 Query: 388 TT-GTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQSREEQAVLL 446 P SP P + + P AP QL+ P P + QA+ Sbjct: 477 PPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP---LQLAKPPPQAPPALATPPLQALPS 533 Query: 447 VRRDRDGQHSWVPRGRGSGGSGRSTPQTPRARSPAAPRLSRVSSPSPELGTTPASIFRTP 506 GQ P +P A P +P +++P P+ P + Sbjct: 534 PPASFPGQ----------------APFSPSASLPMSP----LATPPPQ---APPVLAAPL 570 Query: 507 LQLDPQQEQQLFRRLEEEFLANARALEAVASVTPTGPAPDPARAPDPPAPDSAYCSSSSS 566 LQ+ P A R + +GP A AP PP P S S Sbjct: 571 LQVPPSPPAS------PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPP-----PSRSP 619 Query: 567 SSSLSVLGGKCGQPGDSGRTANGLPGPRSQALSSSSDEGSPCPGMGGPLDAPGSPLACTE 626 SS+LS P +G +++ P S EG P + LA Sbjct: 620 SSTLS-------GPDLAGHSSSATSTPEELRGYDSGPEGGAAAS-----PPPDAELAACH 667 Query: 627 PSRTWARGRMDTQPDRKPSRIPTPRGPRRPSGPAE 661 P+ W+RG R P P P G A+ Sbjct: 668 PA-AWSRGPAPPLAFRGAPGAPLPWPPATGPGSAD 701 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.131 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,170,244 Number of Sequences: 37866 Number of extensions: 2331665 Number of successful extensions: 22143 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 1684 Number of HSP's that attempted gapping in prelim test: 13762 Number of HSP's gapped (non-prelim): 7957 length of query: 681 length of database: 18,247,518 effective HSP length: 109 effective length of query: 572 effective length of database: 14,120,124 effective search space: 8076710928 effective search space used: 8076710928 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.