Guide to the Human Genome
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Name: DST Sequence: fasta or formatted (5171aa) NCBI GI: 34577049
Description:

dystonin isoform 1eA precursor

Referenced in:

Additional Cell Cycle Functions
Cytoskeleton
Spectrin and Plectin Families

Other entries for this name:
alt prot [3062aa] dystonin isoform 1eB precursor
alt prot [5675aa] dystonin isoform 2
alt prot [5537aa] dystonin isoform 3
alt prot [5526aa] dystonin isoform 4
alt prot [5497aa] dystonin isoform 1
alt prot [2649aa] dystonin isoform 1e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        350           3
 C cysteine            1.1         55           1
 D aspartate           5.8        302           2
 E glutamate          10.4        540           4
 F phenylalanine       2.3        121           2
 G glycine             3.4        178           3
 H histidine           2.2        114           2
 I isoleucine          5.0        256           2
 K lysine              9.2        477           3
 L leucine            11.4        590           3
 M methionine          2.0        106           2
 N asparagine          4.0        206           2
 P proline             2.4        126           3
 Q glutamine           7.9        409           3
 R arginine            4.3        224           3
 S serine              7.8        401           3
 T threonine           5.6        287           3
 V valine              5.2        268           2
 W tryptophan          1.4         74           1
 Y tyrosine            1.7         87           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystonin isoform 1eA precursor 
DST                   0.989   dystonin isoform 4 
DST                   0.989   dystonin isoform 3 
DST                   0.989   dystonin isoform 2 
DST                   0.989   dystonin isoform 1 
MACF1                 0.523   microfilament and actin filament cross-linker protei...
MACF1                 0.418   microfilament and actin filament cross-linker protei...
DST                   0.236   dystonin isoform 1eB precursor 
DST                   0.219   dystonin isoform 1e precursor 
PLEC1                 0.083   plectin 1 isoform 11 
PLEC1                 0.083   plectin 1 isoform 10 
PLEC1                 0.083   plectin 1 isoform 8 
PLEC1                 0.083   plectin 1 isoform 7 
PLEC1                 0.083   plectin 1 isoform 6 
PLEC1                 0.083   plectin 1 isoform 3 
PLEC1                 0.083   plectin 1 isoform 2 
PLEC1                 0.083   plectin 1 isoform 1 
LOC652460             0.064   PREDICTED: similar to plectin 1, partial 
DSP                   0.058   desmoplakin isoform I 
DSP                   0.055   desmoplakin isoform II 
SYNE1                 0.034   spectrin repeat containing, nuclear envelope 1 isof...
DMD                   0.030   dystrophin Dp427c isoform 
DMD                   0.030   dystrophin Dp427p2 isoform 
DMD                   0.030   dystrophin Dp427p1 isoform 
DMD                   0.030   dystrophin Dp427l isoform 
DMD                   0.030   dystrophin Dp427m isoform 
SYNE1                 0.029   spectrin repeat containing, nuclear envelope 1 isofo...
PPL                   0.028   periplakin 
SPTAN1                0.026   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.025   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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