Guide to the Human Genome
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Name: DST Sequence: fasta or formatted (5675aa) NCBI GI: 221316618
Description:

dystonin isoform 2

Referenced in:

Additional Cell Cycle Functions
Protein Composition and Structure
Cytoskeleton
Spectrin and Plectin Families

Other entries for this name:
alt prot [3062aa] dystonin isoform 1eB precursor
alt prot [5537aa] dystonin isoform 3
alt prot [5526aa] dystonin isoform 4
alt prot [5497aa] dystonin isoform 1
alt prot [5171aa] dystonin isoform 1eA precursor
alt prot [2649aa] dystonin isoform 1e precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8        385           6
 C cysteine            1.0         59           2
 D aspartate           5.8        328           2
 E glutamate          10.2        579           4
 F phenylalanine       2.4        138           2
 G glycine             3.6        202           3
 H histidine           2.3        131           2
 I isoleucine          5.1        291           2
 K lysine              9.1        516           3
 L leucine            11.3        641           6
 M methionine          2.0        115           2
 N asparagine          3.9        223           2
 P proline             2.6        149           3
 Q glutamine           7.6        431           3
 R arginine            4.7        268           3
 S serine              7.5        427           3
 T threonine           5.4        304           3
 V valine              5.3        303           2
 W tryptophan          1.5         84           1
 Y tyrosine            1.8        101           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystonin isoform 2 
DST                   0.976   dystonin isoform 3 
DST                   0.974   dystonin isoform 4 
DST                   0.963   dystonin isoform 1 
DST                   0.899   dystonin isoform 1eA precursor 
MACF1                 0.533   microfilament and actin filament cross-linker protei...
MACF1                 0.380   microfilament and actin filament cross-linker protei...
DST                   0.204   dystonin isoform 1eB precursor 
DST                   0.189   dystonin isoform 1e precursor 
PLEC1                 0.075   plectin 1 isoform 11 
PLEC1                 0.075   plectin 1 isoform 10 
PLEC1                 0.075   plectin 1 isoform 8 
PLEC1                 0.075   plectin 1 isoform 7 
PLEC1                 0.075   plectin 1 isoform 6 
PLEC1                 0.075   plectin 1 isoform 3 
PLEC1                 0.075   plectin 1 isoform 2 
PLEC1                 0.075   plectin 1 isoform 1 
LOC652460             0.058   PREDICTED: similar to plectin 1, partial 
DSP                   0.053   desmoplakin isoform I 
DSP                   0.050   desmoplakin isoform II 
SYNE1                 0.031   spectrin repeat containing, nuclear envelope 1 isof...
DMD                   0.027   dystrophin Dp427c isoform 
DMD                   0.027   dystrophin Dp427p2 isoform 
DMD                   0.027   dystrophin Dp427p1 isoform 
DMD                   0.027   dystrophin Dp427l isoform 
DMD                   0.027   dystrophin Dp427m isoform 
SYNE1                 0.026   spectrin repeat containing, nuclear envelope 1 isofo...
SPTBN2                0.026   spectrin, beta, non-erythrocytic 2 
SPTBN1                0.026   spectrin, beta, non-erythrocytic 1 isoform 2 
PPL                   0.026   periplakin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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