Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GAS2L1 Sequence: fasta or formatted (337aa) NCBI GI: 23065529
Description:

growth arrest-specific 2 like 1 isoform b

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [681aa] growth arrest-specific 2 like 1 isoform a
alt prot [681aa] growth arrest-specific 2 like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.0         37           3
 C cysteine            2.4          8           1
 D aspartate           3.9         13           1
 E glutamate           7.4         25           1
 F phenylalanine       3.0         10           1
 G glycine             8.3         28           3
 H histidine           1.8          6           1
 I isoleucine          1.8          6           1
 K lysine              2.4          8           1
 L leucine             9.2         31           2
 M methionine          2.4          8           1
 N asparagine          1.8          6           1
 P proline             9.8         33           2
 Q glutamine           2.1          7           1
 R arginine            9.8         33           2
 S serine              6.5         22           2
 T threonine           6.2         21           2
 V valine              8.3         28           2
 W tryptophan          0.9          3           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth arrest-specific 2 like 1 isoform b 
GAS2L1                1.000   growth arrest-specific 2 like 1 isoform a 
GAS2L1                1.000   growth arrest-specific 2 like 1 isoform a 
GAS2L2                0.443   growth arrest-specific 2 like 2 
GAS2                  0.221   growth arrest-specific 2 
GAS2                  0.221   growth arrest-specific 2 
GAS2                  0.221   growth arrest-specific 2 
GAS2L3                0.196   growth arrest-specific 2 like 3 
MACF1                 0.081   microfilament and actin filament cross-linker protei...
MACF1                 0.072   microfilament and actin filament cross-linker protei...
DST                   0.067   dystonin isoform 4 
DST                   0.067   dystonin isoform 3 
DST                   0.067   dystonin isoform 2 
DST                   0.067   dystonin isoform 1 
DST                   0.067   dystonin isoform 1eA precursor 
LOC100288963          0.017   PREDICTED: hypothetical protein XP_002342546 
LIMCH1                0.017   LIM and calponin homology domains 1 isoform c [Homo...
LIMCH1                0.017   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.017   LIM and calponin homology domains 1 isoform a [Homo...
GDF7                  0.017   growth differentiation factor 7 preproprotein 
PAIP1                 0.015   poly(A) binding protein interacting protein 1 isofor...
C17orf96              0.015   hypothetical protein LOC100170841 
IQGAP1                0.015   IQ motif containing GTPase activating protein 1 [Homo...
RIMBP3B               0.015   RIMS binding protein 3B 
RIMBP3C               0.015   RIMS binding protein 3C 
RIMBP3                0.015   DKFZP434H0735 protein 
LOC284297             0.014   hypothetical protein LOC284297 
FH                    0.014   fumarate hydratase precursor 
LOC100292723          0.012   PREDICTED: hypothetical protein 
LOC100292865          0.012   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press