Guide to the Human Genome
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Name: LRRC4B Sequence: fasta or formatted (713aa) NCBI GI: 122937309
Description:

leucine rich repeat containing 4B

Referenced in:

Leucine-rich Repeat Family
Netrins and Laminins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         60           5
 C cysteine            2.2         16           2
 D aspartate           3.4         24           2
 E glutamate           5.5         39           2
 F phenylalanine       2.8         20           1
 G glycine             9.8         70           4
 H histidine           3.5         25           3
 I isoleucine          3.4         24           3
 K lysine              3.2         23           1
 L leucine            11.4         81           2
 M methionine          1.7         12           1
 N asparagine          5.3         38           2
 P proline             6.9         49           2
 Q glutamine           2.2         16           1
 R arginine            5.2         37           2
 S serine              7.2         51           3
 T threonine           8.0         57           2
 V valine              6.6         47           1
 W tryptophan          1.4         10           2
 Y tyrosine            2.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 4B 
LRRC4C                0.547   netrin-G1 ligand 
LRRC4                 0.494   leucine rich repeat containing 4 
LINGO1                0.111   leucine-rich repeat neuronal 6A 
LINGO2                0.108   leucine rich repeat and Ig domain containing 2 [Homo...
LINGO3                0.100   leucine rich repeat and Ig domain containing 3 [Hom...
LINGO4                0.098   leucine rich repeat and Ig domain containing 4 [Homo...
LRFN4                 0.095   leucine rich repeat and fibronectin type III domain ...
LRFN2                 0.089   leucine rich repeat and fibronectin type III domain ...
LRFN5                 0.088   leucine rich repeat and fibronectin type III domain ...
LRIG2                 0.081   leucine-rich repeats and immunoglobulin-like domains ...
VASN                  0.077   slit-like 2 
LRFN3                 0.077   leucine rich repeat and fibronectin type III domain ...
LRRN3                 0.076   leucine rich repeat neuronal 3 
LRRN3                 0.076   leucine rich repeat neuronal 3 
LRRN3                 0.076   leucine rich repeat neuronal 3 
IGFALS                0.076   insulin-like growth factor binding protein, acid la...
LRIG1                 0.076   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.075   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.075   leucine-rich repeats and immunoglobulin-like domain...
PXDN                  0.075   peroxidasin 
LRRC70                0.075   synleurin 
CHAD                  0.075   chondroadherin precursor 
LRFN1                 0.074   leucine rich repeat and fibronectin type III domain...
PXDNL                 0.073   peroxidasin homolog-like 
RTN4RL2               0.073   reticulon 4 receptor-like 2 
LRRN1                 0.073   leucine rich repeat neuronal 1 
IGFALS                0.072   insulin-like growth factor binding protein, acid labi...
LRRN2                 0.072   leucine rich repeat neuronal 2 
LRRN2                 0.072   leucine rich repeat neuronal 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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