Guide to the Human Genome
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Name: LGR6 Sequence: fasta or formatted (967aa) NCBI GI: 62912470
Description:

leucine-rich repeat-containing G protein-coupled receptor 6 isoform 1

Referenced in:

Leucine-rich Repeat Family
Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [915aa] leucine-rich repeat-containing G protein-coupled receptor 6 isofo...
alt prot [828aa] leucine-rich repeat-containing G protein-coupled receptor 6 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         91           3
 C cysteine            2.9         28           2
 D aspartate           3.8         37           2
 E glutamate           5.4         52           2
 F phenylalanine       4.2         41           2
 G glycine             8.5         82           4
 H histidine           3.0         29           2
 I isoleucine          3.3         32           1
 K lysine              2.2         21           1
 L leucine            17.1        165           3
 M methionine          1.7         16           2
 N asparagine          3.6         35           3
 P proline             7.3         71           2
 Q glutamine           4.0         39           2
 R arginine            4.0         39           2
 S serine              7.8         75           2
 T threonine           3.5         34           2
 V valine              5.0         48           2
 W tryptophan          1.1         11           1
 Y tyrosine            2.2         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-rich repeat-containing G protein-coupled rec... 
LGR6                  0.921   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.769   leucine-rich repeat-containing G protein-coupled rec...
LGR5                  0.489   leucine-rich repeat-containing G protein-coupled rece...
LGR4                  0.389   leucine-rich repeat-containing G protein-coupled re...
FSHR                  0.077   follicle stimulating hormone receptor isoform 1 prec...
IGFALS                0.074   insulin-like growth factor binding protein, acid la...
IGFALS                0.074   insulin-like growth factor binding protein, acid labi...
LRRC15                0.073   leucine rich repeat containing 15 isoform a 
LRRC15                0.073   leucine rich repeat containing 15 isoform b 
FSHR                  0.073   follicle stimulating hormone receptor isoform 2 prec...
LRIG1                 0.073   leucine-rich repeats and immunoglobulin-like domains...
TSHR                  0.065   thyroid stimulating hormone receptor isoform 1 precu...
LHCGR                 0.063   luteinizing hormone/choriogonadotropin receptor pre...
LRIG3                 0.063   leucine-rich repeats and immunoglobulin-like domains...
PODN                  0.063   podocan 
LRIG2                 0.060   leucine-rich repeats and immunoglobulin-like domains ...
GP5                   0.059   glycoprotein V (platelet) 
SLIT2                 0.057   slit homolog 2 
CPN2                  0.057   carboxypeptidase N, polypeptide 2, 83kD 
SLIT1                 0.055   slit homolog 1 
LINGO2                0.055   leucine rich repeat and Ig domain containing 2 [Homo...
LINGO3                0.055   leucine rich repeat and Ig domain containing 3 [Hom...
SLIT3                 0.054   slit homolog 3 
LRRTM2                0.053   leucine rich repeat transmembrane neuronal 2 
LRIG3                 0.052   leucine-rich repeats and immunoglobulin-like domain...
RXFP2                 0.051   relaxin/insulin-like family peptide receptor 2 [Homo...
PODNL1                0.049   podocan-like 1 isoform 2 
PODNL1                0.049   podocan-like 1 isoform 1 
KIAA0644              0.049   hypothetical protein LOC9865 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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