Guide to the Human Genome
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Name: LGR6 Sequence: fasta or formatted (915aa) NCBI GI: 62912472
Description:

leucine-rich repeat-containing G protein-coupled receptor 6 isoform 2

Referenced in:

Leucine-rich Repeat Family
Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [967aa] leucine-rich repeat-containing G protein-coupled receptor 6 isofo...
alt prot [828aa] leucine-rich repeat-containing G protein-coupled receptor 6 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         81           3
 C cysteine            2.5         23           2
 D aspartate           3.6         33           2
 E glutamate           5.5         50           2
 F phenylalanine       4.5         41           2
 G glycine             8.2         75           4
 H histidine           3.1         28           2
 I isoleucine          3.7         34           3
 K lysine              2.3         21           1
 L leucine            17.2        157           3
 M methionine          1.6         15           2
 N asparagine          3.8         35           3
 P proline             6.7         61           2
 Q glutamine           4.2         38           2
 R arginine            4.3         39           2
 S serine              7.9         72           2
 T threonine           3.6         33           2
 V valine              5.4         49           2
 W tryptophan          1.1         10           1
 Y tyrosine            2.2         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-rich repeat-containing G protein-coupled rec... 
LGR6                  0.981   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.819   leucine-rich repeat-containing G protein-coupled rec...
LGR5                  0.497   leucine-rich repeat-containing G protein-coupled rece...
LGR4                  0.395   leucine-rich repeat-containing G protein-coupled re...
FSHR                  0.082   follicle stimulating hormone receptor isoform 1 prec...
FSHR                  0.077   follicle stimulating hormone receptor isoform 2 prec...
LRRC15                0.071   leucine rich repeat containing 15 isoform a 
LRRC15                0.071   leucine rich repeat containing 15 isoform b 
IGFALS                0.070   insulin-like growth factor binding protein, acid la...
IGFALS                0.070   insulin-like growth factor binding protein, acid labi...
TSHR                  0.069   thyroid stimulating hormone receptor isoform 1 precu...
LHCGR                 0.067   luteinizing hormone/choriogonadotropin receptor pre...
GP5                   0.060   glycoprotein V (platelet) 
CPN2                  0.057   carboxypeptidase N, polypeptide 2, 83kD 
SLIT2                 0.056   slit homolog 2 
LRIG3                 0.055   leucine-rich repeats and immunoglobulin-like domain...
RXFP2                 0.055   relaxin/insulin-like family peptide receptor 2 [Homo...
LRIG3                 0.054   leucine-rich repeats and immunoglobulin-like domains...
SLIT1                 0.053   slit homolog 1 
LRIG1                 0.053   leucine-rich repeats and immunoglobulin-like domains...
PODNL1                0.052   podocan-like 1 isoform 2 
PODNL1                0.052   podocan-like 1 isoform 1 
LRRC70                0.052   synleurin 
LRRC32                0.052   leucine rich repeat containing 32 precursor 
LRRC32                0.052   leucine rich repeat containing 32 precursor 
LRIG2                 0.051   leucine-rich repeats and immunoglobulin-like domains ...
LINGO2                0.050   leucine rich repeat and Ig domain containing 2 [Homo...
PODN                  0.049   podocan 
LRRN2                 0.048   leucine rich repeat neuronal 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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