Guide to the Human Genome
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Name: LGR4 Sequence: fasta or formatted (951aa) NCBI GI: 157694513
Description:

leucine-rich repeat-containing G protein-coupled receptor 4

Referenced in:

Leucine-rich Repeat Family
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         67           2
 C cysteine            3.4         32           2
 D aspartate           4.3         41           2
 E glutamate           4.5         43           2
 F phenylalanine       6.4         61           2
 G glycine             6.0         57           2
 H histidine           2.6         25           1
 I isoleucine          5.0         48           3
 K lysine              4.1         39           2
 L leucine            14.7        140           2
 M methionine          1.3         12           1
 N asparagine          5.6         53           2
 P proline             4.9         47           2
 Q glutamine           3.5         33           2
 R arginine            2.8         27           2
 S serine             10.1         96           2
 T threonine           5.3         50           2
 V valine              5.2         49           2
 W tryptophan          1.1         10           2
 Y tyrosine            2.2         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine-rich repeat-containing G protein-coupled re... 
LGR5                  0.415   leucine-rich repeat-containing G protein-coupled rece...
LGR6                  0.397   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.379   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.285   leucine-rich repeat-containing G protein-coupled rec...
FSHR                  0.095   follicle stimulating hormone receptor isoform 1 prec...
LHCGR                 0.091   luteinizing hormone/choriogonadotropin receptor pre...
FSHR                  0.082   follicle stimulating hormone receptor isoform 2 prec...
TSHR                  0.082   thyroid stimulating hormone receptor isoform 1 precu...
LRRC15                0.079   leucine rich repeat containing 15 isoform a 
LRRC15                0.079   leucine rich repeat containing 15 isoform b 
IGFALS                0.078   insulin-like growth factor binding protein, acid la...
IGFALS                0.078   insulin-like growth factor binding protein, acid labi...
LRIG1                 0.071   leucine-rich repeats and immunoglobulin-like domains...
LINGO1                0.066   leucine-rich repeat neuronal 6A 
RXFP1                 0.064   relaxin/insulin-like family peptide receptor 1 [Homo...
LRIG3                 0.062   leucine-rich repeats and immunoglobulin-like domains...
SLIT2                 0.061   slit homolog 2 
LINGO2                0.061   leucine rich repeat and Ig domain containing 2 [Homo...
SLIT1                 0.059   slit homolog 1 
PODN                  0.058   podocan 
SLIT3                 0.057   slit homolog 3 
GP5                   0.057   glycoprotein V (platelet) 
LINGO3                0.055   leucine rich repeat and Ig domain containing 3 [Hom...
CPN2                  0.055   carboxypeptidase N, polypeptide 2, 83kD 
SHOC2                 0.053   soc-2 suppressor of clear homolog 
DCN                   0.051   decorin isoform a preproprotein 
DCN                   0.051   decorin isoform a preproprotein 
NYX                   0.050   nyctalopin precursor 
KIAA0644              0.050   hypothetical protein LOC9865 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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