Guide to the Human Genome
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Name: LRRC32 Sequence: fasta or formatted (662aa) NCBI GI: 193083139
Description:

leucine rich repeat containing 32 precursor

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [662aa] leucine rich repeat containing 32 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         50           2
 C cysteine            2.7         18           3
 D aspartate           4.2         28           1
 E glutamate           5.0         33           2
 F phenylalanine       3.0         20           1
 G glycine             6.6         44           2
 H histidine           2.6         17           1
 I isoleucine          3.2         21           3
 K lysine              1.7         11           2
 L leucine            21.8        144           4
 M methionine          1.2          8           1
 N asparagine          5.3         35           2
 P proline             5.6         37           2
 Q glutamine           4.7         31           2
 R arginine            5.6         37           2
 S serine              9.2         61           2
 T threonine           4.8         32           2
 V valine              3.6         24           1
 W tryptophan          0.6          4           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 32 precursor 
LRRC32                1.000   leucine rich repeat containing 32 precursor 
LRRC33                0.224   leucine rich repeat containing 33 
IGFALS                0.085   insulin-like growth factor binding protein, acid la...
IGFALS                0.085   insulin-like growth factor binding protein, acid labi...
LRRC15                0.075   leucine rich repeat containing 15 isoform a 
LRRC15                0.075   leucine rich repeat containing 15 isoform b 
LGR6                  0.074   leucine-rich repeat-containing G protein-coupled rec...
SLIT2                 0.073   slit homolog 2 
LRIG1                 0.070   leucine-rich repeats and immunoglobulin-like domains...
LINGO4                0.070   leucine rich repeat and Ig domain containing 4 [Homo...
LGR5                  0.070   leucine-rich repeat-containing G protein-coupled rece...
LGR4                  0.069   leucine-rich repeat-containing G protein-coupled re...
PODN                  0.068   podocan 
LINGO1                0.068   leucine-rich repeat neuronal 6A 
PODNL1                0.068   podocan-like 1 isoform 2 
PODNL1                0.068   podocan-like 1 isoform 1 
TLR8                  0.067   toll-like receptor 8 
LINGO3                0.067   leucine rich repeat and Ig domain containing 3 [Hom...
LINGO2                0.065   leucine rich repeat and Ig domain containing 2 [Homo...
SLIT3                 0.065   slit homolog 3 
TLR3                  0.063   toll-like receptor 3 
LGR6                  0.063   leucine-rich repeat-containing G protein-coupled rec...
SHOC2                 0.062   soc-2 suppressor of clear homolog 
NYX                   0.061   nyctalopin precursor 
CPN2                  0.060   carboxypeptidase N, polypeptide 2, 83kD 
CHADL                 0.060   chondroadherin-like 
LRIG3                 0.059   leucine-rich repeats and immunoglobulin-like domains...
GP5                   0.059   glycoprotein V (platelet) 
SLIT1                 0.057   slit homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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