PODNL1 15290

Name: PODNL1	Sequence: fasta or formatted (512aa)		NCBI GI: 226342931
Description: podocan-like 1 isoform 1		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt prot [510aa] podocan-like 1 isoform 2 alt prot [421aa] podocan-like 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 44 2 C cysteine 1.4 7 1 D aspartate 3.3 17 1 E glutamate 3.9 20 1 F phenylalanine 1.8 9 1 G glycine 6.1 31 1 H histidine 4.7 24 2 I isoleucine 1.8 9 1 K lysine 0.8 4 1 L leucine 21.1 108 7 M methionine 1.0 5 1 N asparagine 5.5 28 2 P proline 8.6 44 3 Q glutamine 5.3 27 1 R arginine 9.0 46 2 S serine 6.6 34 2 T threonine 4.1 21 2 V valine 4.5 23 1 W tryptophan 0.6 3 1 Y tyrosine 1.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 podocan-like 1 isoform 1 PODNL1 0.985 podocan-like 1 isoform 2 PODNL1 0.577 podocan-like 1 isoform 3 PODN 0.431 podocan IGFALS 0.130 insulin-like growth factor binding protein, acid labi... IGFALS 0.130 insulin-like growth factor binding protein, acid la... LRRC15 0.113 leucine rich repeat containing 15 isoform a LRRC15 0.113 leucine rich repeat containing 15 isoform b PRELP 0.113 proline arginine-rich end leucine-rich repeat protei... PRELP 0.113 proline arginine-rich end leucine-rich repeat protein... FMOD 0.112 fibromodulin precursor KERA 0.109 keratocan ECM2 0.106 extracellular matrix protein 2 precursor LUM 0.099 lumican precursor ASPN 0.099 asporin DCN 0.097 decorin isoform a preproprotein DCN 0.097 decorin isoform a preproprotein FLRT3 0.097 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.097 fibronectin leucine rich transmembrane protein 3 prec... KIAA0644 0.096 hypothetical protein LOC9865 FLRT1 0.095 fibronectin leucine rich transmembrane protein 1 [Ho... SLIT2 0.095 slit homolog 2 FLRT2 0.095 fibronectin leucine rich transmembrane protein 2 [Hom... LGR6 0.095 leucine-rich repeat-containing G protein-coupled rec... LGR6 0.095 leucine-rich repeat-containing G protein-coupled rec... LGR5 0.094 leucine-rich repeat-containing G protein-coupled rece... BGN 0.092 biglycan preproprotein LGR4 0.088 leucine-rich repeat-containing G protein-coupled re... CPN2 0.088 carboxypeptidase N, polypeptide 2, 83kD LRRTM2 0.087 leucine rich repeat transmembrane neuronal 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.