PODN 29802

Name: PODN	Sequence: fasta or formatted (661aa)		NCBI GI: 45505137
Description: podocan		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 45 2 C cysteine 0.6 4 1 D aspartate 3.3 22 1 E glutamate 8.2 54 12 F phenylalanine 3.2 21 1 G glycine 6.7 44 2 H histidine 3.2 21 1 I isoleucine 2.9 19 1 K lysine 3.6 24 1 L leucine 17.5 116 7 M methionine 0.8 5 1 N asparagine 7.0 46 2 P proline 6.8 45 2 Q glutamine 3.0 20 1 R arginine 8.3 55 2 S serine 6.8 45 2 T threonine 3.3 22 2 V valine 5.0 33 2 W tryptophan 0.5 3 1 Y tyrosine 2.6 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 podocan PODNL1 0.334 podocan-like 1 isoform 2 PODNL1 0.334 podocan-like 1 isoform 1 PODNL1 0.209 podocan-like 1 isoform 3 PRELP 0.096 proline arginine-rich end leucine-rich repeat protei... PRELP 0.096 proline arginine-rich end leucine-rich repeat protein... LGR6 0.094 leucine-rich repeat-containing G protein-coupled rec... LRRC15 0.093 leucine rich repeat containing 15 isoform a LRRC15 0.093 leucine rich repeat containing 15 isoform b KERA 0.093 keratocan ECM2 0.092 extracellular matrix protein 2 precursor LGR5 0.088 leucine-rich repeat-containing G protein-coupled rece... IGFALS 0.088 insulin-like growth factor binding protein, acid la... IGFALS 0.088 insulin-like growth factor binding protein, acid labi... LGR4 0.085 leucine-rich repeat-containing G protein-coupled re... FLRT3 0.082 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.082 fibronectin leucine rich transmembrane protein 3 prec... LRIG1 0.081 leucine-rich repeats and immunoglobulin-like domains... DCN 0.080 decorin isoform a preproprotein DCN 0.080 decorin isoform a preproprotein FLRT2 0.078 fibronectin leucine rich transmembrane protein 2 [Hom... FLRT1 0.078 fibronectin leucine rich transmembrane protein 1 [Ho... BGN 0.077 biglycan preproprotein ASPN 0.077 asporin TLR3 0.076 toll-like receptor 3 LRIG3 0.074 leucine-rich repeats and immunoglobulin-like domains... CPN2 0.074 carboxypeptidase N, polypeptide 2, 83kD LUM 0.074 lumican precursor FMOD 0.071 fibromodulin precursor LGR6 0.069 leucine-rich repeat-containing G protein-coupled rec... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.