Guide to the Human Genome
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Name: LRRC70 Sequence: fasta or formatted (622aa) NCBI GI: 198041768
Description:

synleurin

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         32           2
 C cysteine            2.4         15           1
 D aspartate           2.1         13           1
 E glutamate           4.8         30           1
 F phenylalanine       5.0         31           2
 G glycine             4.0         25           1
 H histidine           2.4         15           2
 I isoleucine          6.6         41           2
 K lysine              4.2         26           1
 L leucine            16.4        102           5
 M methionine          1.1          7           2
 N asparagine         10.1         63           3
 P proline             3.9         24           2
 Q glutamine           3.5         22           1
 R arginine            4.8         30           2
 S serine              8.8         55           2
 T threonine           5.1         32           2
 V valine              5.5         34           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.2         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   synleurin 
KIAA0644              0.116   hypothetical protein LOC9865 
CHAD                  0.113   chondroadherin precursor 
LRRC15                0.111   leucine rich repeat containing 15 isoform a 
LRRC15                0.111   leucine rich repeat containing 15 isoform b 
CPN2                  0.109   carboxypeptidase N, polypeptide 2, 83kD 
LRIG3                 0.101   leucine-rich repeats and immunoglobulin-like domain...
LGR5                  0.100   leucine-rich repeat-containing G protein-coupled rece...
IGFALS                0.097   insulin-like growth factor binding protein, acid la...
IGFALS                0.097   insulin-like growth factor binding protein, acid labi...
LRIG2                 0.097   leucine-rich repeats and immunoglobulin-like domains ...
LRIG1                 0.097   leucine-rich repeats and immunoglobulin-like domains...
LINGO2                0.095   leucine rich repeat and Ig domain containing 2 [Homo...
NYX                   0.094   nyctalopin precursor 
LINGO3                0.094   leucine rich repeat and Ig domain containing 3 [Hom...
LRIG3                 0.093   leucine-rich repeats and immunoglobulin-like domains...
LRRN1                 0.091   leucine rich repeat neuronal 1 
LRRTM4                0.091   leucine rich repeat transmembrane neuronal 4 isofor...
LRRTM4                0.091   leucine rich repeat transmembrane neuronal 4 isofor...
LRRC4C                0.090   netrin-G1 ligand 
LRRC4B                0.088   leucine rich repeat containing 4B 
CHADL                 0.087   chondroadherin-like 
LINGO1                0.087   leucine-rich repeat neuronal 6A 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRN2                 0.085   leucine rich repeat neuronal 2 
LRRN2                 0.085   leucine rich repeat neuronal 2 
FLRT1                 0.084   fibronectin leucine rich transmembrane protein 1 [Ho...
LRRC4                 0.083   leucine rich repeat containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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