Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 22538808
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22538808 small inducible cytokine A23 isoform CKbeta8
precursor [Homo sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 242 4e-65
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 229 4e-61
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 159 4e-40
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 83 4e-17
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 81 2e-16
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 81 2e-16
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 80 5e-16
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 77 2e-15
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 67 2e-12
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 67 2e-12
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 67 4e-12
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 67 4e-12
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 64 2e-11
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 55 9e-09
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 54 3e-08
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 52 8e-08
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 52 1e-07
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 52 1e-07
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 50 3e-07
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 48 2e-06
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 45 1e-05
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 45 2e-05
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 44 3e-05
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 44 4e-05
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 44 4e-05
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 43 6e-05
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 43 6e-05
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens] 42 1e-04
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 42 1e-04
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 42 1e-04
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 242 bits (618), Expect = 4e-65
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRKN 120
RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRKN
Sbjct: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRKN 120
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 229 bits (584), Expect = 4e-61
Identities = 119/137 (86%), Positives = 119/137 (86%), Gaps = 17/137 (12%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDR-------------- 46
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLD
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
Query: 47 ---FHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 103
FHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
Sbjct: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
Query: 104 VCVRMLKLDTRIKTRKN 120
VCVRMLKLDTRIKTRKN
Sbjct: 121 VCVRMLKLDTRIKTRKN 137
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 159 bits (403), Expect = 4e-40
Identities = 80/110 (72%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVSVAALSCLMLV LGSQA+ DAETE MMSKLPLENPV+L+ FH +ADCC SY
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHF-AADCCTSYIS 59
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
+SIPCSL++SYFET+SECSKPGVIFLTKKGR+ CA PS VQ C++ LK
Sbjct: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 83.2 bits (204), Expect = 4e-17
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYT 59
MK+SVAA+ +L+T ALG++ + + + K+ L+ ++ +H + +CC +YT
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK--LVGGPYHPS--ECCFTYT 56
Query: 60 PRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
IP + Y+ETNS+CSKPG++F+TK+G C NPSDK VQ ++ +K
Sbjct: 57 TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 81.3 bits (199), Expect = 2e-16
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 20/111 (18%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
M+VS AAL+ L+ AL +Q L P+ D T CC SYT
Sbjct: 1 MQVSTAALAVLLCTMALCNQV----------------LSAPLAAD----TPTACCFSYTS 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKL 111
R IP + + YFET+S+CSKP VIFLTK+GR+ CA+PS++ VQ V L+L
Sbjct: 41 RQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLEL 91
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 81.3 bits (199), Expect = 2e-16
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 20/111 (18%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
M+VS AAL+ L+ AL +Q L P+ D T CC SYT
Sbjct: 1 MQVSTAALAVLLCTMALCNQV----------------LSAPLAAD----TPTACCFSYTS 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKL 111
R IP + + YFET+S+CSKP VIFLTK+GR+ CA+PS++ VQ V L+L
Sbjct: 41 RQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLEL 91
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 79.7 bits (195), Expect = 5e-16
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 21/111 (18%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
M+VS AAL+ L+ AL +Q + A+T CC SYT
Sbjct: 1 MQVSTAALAVLLCTMALCNQFSASLAADTP---------------------TACCFSYTS 39
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKL 111
R IP + + YFET+S+CSKPGVIFLTK+ R+ CA+PS++ VQ V L+L
Sbjct: 40 RQIPQNFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLEL 90
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 77.4 bits (189), Expect = 2e-15
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 21/111 (18%)
Query: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYT 59
MK+SVAA+ +L+T ALG++ + S+ P +H + +CC +YT
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESS---------SRGP---------YHPS--ECCFTYT 40
Query: 60 PRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
IP + Y+ETNS+CSKPG++F+TK+G C NPSDK VQ ++ +K
Sbjct: 41 TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 67.4 bits (163), Expect = 2e-12
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MK+ V LS L+LV A S L L P+ D A CC SYT
Sbjct: 1 MKLCVTVLSLLVLVAAFCS----------------LALSAPMGSDPPTA----CCFSYTA 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 112
R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 41 RKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 67.4 bits (163), Expect = 2e-12
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MK+ V LS L+LV A S L L P+ D A CC SYT
Sbjct: 1 MKLCVTVLSLLVLVAAFCS----------------LALSAPMGSDPPTA----CCFSYTA 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 112
R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 41 RKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 66.6 bits (161), Expect = 4e-12
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 21/111 (18%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS AAL+ +++ TAL + A + + + + CC +Y
Sbjct: 1 MKVSAAALAVILIATALCAPASASP---------------------YSSDTTPCCFAYIA 39
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKL 111
R +P + ++ YF T+ +CS P V+F+T+K R+ CANP K V+ + L++
Sbjct: 40 RPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLEM 90
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 66.6 bits (161), Expect = 4e-12
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 20/112 (17%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MK+ V LS LMLV A S A L P+ D A CC SYT
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPA----------------LSAPMGSDPPTA----CCFSYTA 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 112
R +P + + Y+ET+S CS+P V+F TK+ ++ CA+PS+ VQ V L+L+
Sbjct: 41 RKLPRNFVVDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYVYDLELN 92
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 64.3 bits (155), Expect = 2e-11
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 54 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 112
CC+ YT IP + Y ET+ +C KPGVI LTK+GR+ CA+P+ K VQ + LKL+
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDLKLN 88
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 55.5 bits (132), Expect = 9e-09
Identities = 19/58 (32%), Positives = 42/58 (72%)
Query: 53 DCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
+CC+ Y +IP L+++++T+ +CS+ ++F+T +GR C++P++K+V+ V+ L+
Sbjct: 32 ECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYLQ 89
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]
Length = 94
Score = 53.9 bits (128), Expect = 3e-08
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 51 SADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
S CC Y+ + +P + + SY T++ CS+ VIF TK+G++ C +P K VQ + +LK
Sbjct: 30 SKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 52.4 bits (124), Expect = 8e-08
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS AALS L+L+ + S +R K+P + T + CC+ Y
Sbjct: 1 MKVSEAALSLLVLILIITSASR---------SQPKVP--------EWVNTPSTCCLKYYE 43
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVR 107
+ +P L+ Y + + C P +IF+TK+ R C NP+D VQ ++
Sbjct: 44 KVLPRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 52.0 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS L L++ A Q DA L P + CC +++
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQGLAQPDA----------LNVP----------STCCFTFSS 40
Query: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 103
+ I L+SY T S C + VIF TK G+ CA+P +K VQ
Sbjct: 41 KKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQ 83
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 51.6 bits (122), Expect = 1e-07
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS A L L++ Q D+ + +P+ CC +
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQPDSVS------IPIT--------------CCFNVIN 40
Query: 61 RSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 109
R IP LESY TN +C K VIF TK+G+ CA+P ++ V+ ++ L
Sbjct: 41 RKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHL 90
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]
Length = 99
Score = 50.4 bits (119), Expect = 3e-07
Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MK S AAL CL+L A S L PV ++ TS CC +
Sbjct: 1 MKAS-AALLCLLLTAAA---------------FSPQGLAQPVGIN----TSTTCCYRFIN 40
Query: 61 RSIPCSLLESYFET-NSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRK 119
+ IP LESY T +S C + VIF TK + CA+P+ K VQ M LD + +T K
Sbjct: 41 KKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDF--MKHLDKKTQTPK 98
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 47.8 bits (112), Expect = 2e-06
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 54 CCISYTPRSIPCSLLESY-FETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 103
CC+ + + IP + + SY + S C K GVIF TKKG++FC +P + VQ
Sbjct: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQ 83
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 45.1 bits (105), Expect = 1e-05
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 23/110 (20%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS A L L++ A Q L P + CC +
Sbjct: 1 MKVSAALLWLLLIAAAFSPQG----------------LAGPA------SVPTTCCFNLAN 38
Query: 61 RSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 109
R IP LESY T+ +C + VIF TK + CA+P K VQ ++ L
Sbjct: 39 RKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 44.7 bits (104), Expect = 2e-05
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 23/120 (19%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
MKVS A L L++ Q DA + PV CC ++T
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDA----------INAPVT----------CCYNFTN 40
Query: 61 RSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTRIKTRK 119
R I L SY T+S+C K VIF T + CA+P K VQ M LD + +T K
Sbjct: 41 RKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ--DSMDHLDKQTQTPK 98
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 43.9 bits (102), Expect = 3e-05
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 53 DCCISYTPRSIPCSLLES--YFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ-VCVRML 109
DCC+S T + IP ++ + Y C P V+F T +GR+ CA P V+ + R+
Sbjct: 28 DCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQ 87
Query: 110 KLDTRIKTRKN 120
+ ++K R +
Sbjct: 88 RTSAKMKRRSS 98
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 55 CISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTR 114
C+S T + +P S +++Y T +E S VIF+TK+G + CA+P V+ VR +D +
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVR--SMDRK 87
Query: 115 IKTRKN 120
TR N
Sbjct: 88 SNTRNN 93
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 43.5 bits (101), Expect = 4e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 55 CISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTR 114
C+S T + +P S +++Y T +E S VIF+TK+G + CA+P V+ VR +D +
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVR--SMDRK 87
Query: 115 IKTRKN 120
TR N
Sbjct: 88 SNTRNN 93
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 42.7 bits (99), Expect = 6e-05
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 24 TKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTPRSIPCSLLESYFE--TNSECSKP 81
TK +MS L L L A++ DCC+ YT R + + + N C
Sbjct: 4 TKSLLLAALMSVLLLH---LCGESEASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDIN 60
Query: 82 GVIFLTKKGRRFCANPSDKQVQVCVRML 109
+IF TKK CANP V+ VR+L
Sbjct: 61 AIIFHTKKKLSVCANPKQTWVKYIVRLL 88
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 42.7 bits (99), Expect = 6e-05
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 53 DCCISYTPRSIPCSLLESY--FETNSECSKPGVIFLTKKGRR--FCANPSDKQVQVCVRM 108
DCC+ Y+ R IP ++ SY E + CS P ++FL +K + CA+P + VQ ++
Sbjct: 30 DCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQH 89
Query: 109 L 109
L
Sbjct: 90 L 90
>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens]
Length = 96
Score = 42.0 bits (97), Expect = 1e-04
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 ATSADCCISYTPRSIPCSLLESYFE--TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCV 106
A++ DCC+ YT R + + + N C +IF TKK CANP V+ V
Sbjct: 27 ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 86
Query: 107 RML 109
R+L
Sbjct: 87 RLL 89
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 42.0 bits (97), Expect = 1e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 54 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
CC S+ + IP + Y T+S CS G+IF K+G+ CA + VQ +ML+
Sbjct: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 42.0 bits (97), Expect = 1e-04
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 54 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 109
CC Y +P +++ ++ T+ C +PGV+ LT + + CA+P V++ + L
Sbjct: 36 CCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVLLTFRDKEICADPRVPWVKMILNKL 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.132 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,163,372
Number of Sequences: 37866
Number of extensions: 158716
Number of successful extensions: 305
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 256
Number of HSP's gapped (non-prelim): 40
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.