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Search of human proteins with 22538806
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
(137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 278 1e-75
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 229 5e-61
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 149 7e-37
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 77 4e-15
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 76 8e-15
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 76 8e-15
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 76 8e-15
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 74 5e-14
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 65 2e-11
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 65 2e-11
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 65 2e-11
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 63 9e-11
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 61 3e-10
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 60 7e-10
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 54 3e-08
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 50 8e-07
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 49 1e-06
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 49 2e-06
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 49 2e-06
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 48 3e-06
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 45 1e-05
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 44 4e-05
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 44 4e-05
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 44 4e-05
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 44 5e-05
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 43 7e-05
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 43 9e-05
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 42 1e-04
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens] 42 2e-04
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 42 2e-04
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 278 bits (710), Expect = 1e-75
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
Query: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
Sbjct: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
Query: 121 VCVRMLKLDTRIKTRKN 137
VCVRMLKLDTRIKTRKN
Sbjct: 121 VCVRMLKLDTRIKTRKN 137
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 229 bits (584), Expect = 5e-61
Identities = 119/137 (86%), Positives = 119/137 (86%), Gaps = 17/137 (12%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLD
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDR-------------- 46
Query: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
FHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ
Sbjct: 47 ---FHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 103
Query: 121 VCVRMLKLDTRIKTRKN 137
VCVRMLKLDTRIKTRKN
Sbjct: 104 VCVRMLKLDTRIKTRKN 120
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 149 bits (376), Expect = 7e-37
Identities = 80/127 (62%), Positives = 91/127 (71%), Gaps = 18/127 (14%)
Query: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLSH 60
MKVSVAALSCLMLV LGSQA+ DAETE MMSKLPLENPV+L+
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLN--------------- 45
Query: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
FH +ADCC SY +SIPCSL++SYFET+SECSKPGVIFLTKKGR+ CA PS VQ
Sbjct: 46 --SFHF-AADCCTSYISQSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQ 102
Query: 121 VCVRMLK 127
C++ LK
Sbjct: 103 DCMKKLK 109
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 77.0 bits (188), Expect = 4e-15
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 22/128 (17%)
Query: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLS 59
MK+SVAA+ +L+T ALG++ + + + K+ L+
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK-------------------- 40
Query: 60 HAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQV 119
G ++CC +YT IP + Y+ETNS+CSKPG++F+TK+G C NPSDK V
Sbjct: 41 -LVGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWV 99
Query: 120 QVCVRMLK 127
Q ++ +K
Sbjct: 100 QDYIKDMK 107
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 76.3 bits (186), Expect = 8e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 67 TSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 126
T CC SYT R IP + + YFET+S+CSKPGVIFLTK+ R+ CA+PS++ VQ V L
Sbjct: 29 TPTACCFSYTSRQIPQNFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 88
Query: 127 KL 128
+L
Sbjct: 89 EL 90
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 76.3 bits (186), Expect = 8e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 67 TSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 126
T CC SYT R IP + + YFET+S+CSKP VIFLTK+GR+ CA+PS++ VQ V L
Sbjct: 30 TPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89
Query: 127 KL 128
+L
Sbjct: 90 EL 91
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 76.3 bits (186), Expect = 8e-15
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 67 TSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 126
T CC SYT R IP + + YFET+S+CSKP VIFLTK+GR+ CA+PS++ VQ V L
Sbjct: 30 TPTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89
Query: 127 KL 128
+L
Sbjct: 90 EL 91
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 73.6 bits (179), Expect = 5e-14
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 52 IGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFC 111
+G + S +H + +CC +YT IP + Y+ETNS+CSKPG++F+TK+G C
Sbjct: 18 LGTKTESSSRGPYHPS--ECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVC 75
Query: 112 ANPSDKQVQVCVRMLK 127
NPSDK VQ ++ +K
Sbjct: 76 TNPSDKWVQDYIKDMK 91
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 65.1 bits (157), Expect = 2e-11
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
CC SYT R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 34 CCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 65.1 bits (157), Expect = 2e-11
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
CC SYT R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 34 CCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 64.7 bits (156), Expect = 2e-11
Identities = 32/74 (43%), Positives = 42/74 (56%)
Query: 56 MTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPS 115
M L A CC+ YT IP + Y ET+ +C KPGVI LTK+GR+ CA+P+
Sbjct: 15 MALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPN 74
Query: 116 DKQVQVCVRMLKLD 129
K VQ + LKL+
Sbjct: 75 KKWVQKYISDLKLN 88
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 62.8 bits (151), Expect = 9e-11
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
CC SYT R +P + + Y+ET+S CS+P V+F TK+ ++ CA+PS+ VQ V L+L+
Sbjct: 34 CCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYVYDLELN 92
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 61.2 bits (147), Expect = 3e-10
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 61 AAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
A+ + + + CC +Y R +P + ++ YF T+ +CS P V+F+T+K R+ CANP K V+
Sbjct: 23 ASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVR 82
Query: 121 VCVRMLKL 128
+ L++
Sbjct: 83 EYINSLEM 90
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 59.7 bits (143), Expect = 7e-10
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 37 PLENPVLLDMLWRRKIGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETNSECS 96
PL+ L+ +L +G + HAA +CC+ Y +IP L+++++T+ +CS
Sbjct: 3 PLKMLALVTLL----LGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCS 58
Query: 97 KPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 127
+ ++F+T +GR C++P++K+V+ V+ L+
Sbjct: 59 RDAIVFVTVQGRAICSDPNNKRVKNAVKYLQ 89
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]
Length = 94
Score = 54.3 bits (129), Expect = 3e-08
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 33 MSKLPLENPVLLDMLWRRKIGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETN 92
M L L + VLL L +G T + + T CC Y+ + +P + + SY T+
Sbjct: 1 MMGLSLASAVLLASLLSLHLG---TATRGSDISKT---CCFQYSHKPLPWTWVRSYEFTS 54
Query: 93 SECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 127
+ CS+ VIF TK+G++ C +P K VQ + +LK
Sbjct: 55 NSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 49.7 bits (117), Expect = 8e-07
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 71 CCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRML 126
CC + R IP LESY TN +C K VIF TK+G+ CA+P ++ V+ ++ L
Sbjct: 34 CCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHL 90
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 49.3 bits (116), Expect = 1e-06
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
CC +++ + I L+SY T S C + VIF TK G+ CA+P +K VQ
Sbjct: 34 CCFTFSSKKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQ 83
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 48.5 bits (114), Expect = 2e-06
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 46 MLWRRKIGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLT 104
+LW I + AG + CC + R IP LESY T+ +C + VIF T
Sbjct: 7 LLWLLLIAAAFSPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKT 66
Query: 105 KKGRRFCANPSDKQVQVCVRML 126
K + CA+P K VQ ++ L
Sbjct: 67 KLAKDICADPKKKWVQDSMKYL 88
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]
Length = 99
Score = 48.5 bits (114), Expect = 2e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 67 TSADCCISYTPRSIPCSLLESYFET-NSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRM 125
TS CC + + IP LESY T +S C + VIF TK + CA+P+ K VQ M
Sbjct: 30 TSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDF--M 87
Query: 126 LKLDTRIKTRK 136
LD + +T K
Sbjct: 88 KHLDKKTQTPK 98
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 47.8 bits (112), Expect = 3e-06
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 71 CCISYTPRSIPCSLLESY-FETNSECSKPGVIFLTKKGRRFCANPSDKQVQ 120
CC+ + + IP + + SY + S C K GVIF TKKG++FC +P + VQ
Sbjct: 33 CCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQ 83
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 45.4 bits (106), Expect = 1e-05
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 67 TSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVR 124
T + CC+ Y + +P L+ Y + + C P +IF+TK+ R C NP+D VQ ++
Sbjct: 33 TPSTCCLKYYEKVLPRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIK 89
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 43.9 bits (102), Expect = 4e-05
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 43 LLDMLWRRKIGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIF 102
LL +L + Q T + G + + CC Y +P +++ ++ T+ C +PGV+
Sbjct: 8 LLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVL 67
Query: 103 LTKKGRRFCANPSDKQVQVCVRML 126
LT + + CA+P V++ + L
Sbjct: 68 LTFRDKEICADPRVPWVKMILNKL 91
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 43.9 bits (102), Expect = 4e-05
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 63 GFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVC 122
G + C+S T + +P S +++Y T +E S VIF+TK+G + CA+P V+
Sbjct: 23 GSEVSDKRTCVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDV 80
Query: 123 VRMLKLDTRIKTRKN 137
VR +D + TR N
Sbjct: 81 VR--SMDRKSNTRNN 93
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 43.9 bits (102), Expect = 4e-05
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 70 DCCISYTPRSIPCSLLES--YFETNSECSKPGVIFLTKKGRRFCANPSDKQVQ-VCVRML 126
DCC+S T + IP ++ + Y C P V+F T +GR+ CA P V+ + R+
Sbjct: 28 DCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQ 87
Query: 127 KLDTRIKTRKN 137
+ ++K R +
Sbjct: 88 RTSAKMKRRSS 98
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 43.5 bits (101), Expect = 5e-05
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 72 CISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLDTR 131
C+S T + +P S +++Y T +E S VIF+TK+G + CA+P V+ VR +D +
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVR--SMDRK 87
Query: 132 IKTRKN 137
TR N
Sbjct: 88 SNTRNN 93
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 43.1 bits (100), Expect = 7e-05
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 63 GFHATSADCCISYTPRSIPCSLLESY--FETNSECSKPGVIFLTKKGRR--FCANPSDKQ 118
G + DCC+ Y+ R IP ++ SY E + CS P ++FL +K + CA+P +
Sbjct: 23 GSDGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELW 82
Query: 119 VQVCVRML 126
VQ ++ L
Sbjct: 83 VQQLMQHL 90
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 42.7 bits (99), Expect = 9e-05
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 71 CCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
CC ++T R I L SY T+S+C K VIF T + CA+P K VQ M LD
Sbjct: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ--DSMDHLD 91
Query: 130 TRIKTRK 136
+ +T K
Sbjct: 92 KQTQTPK 98
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 42.4 bits (98), Expect = 1e-04
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 58 LSHAAG-FHATSADCCISYTPRSIPCSLLESYFE--TNSECSKPGVIFLTKKGRRFCANP 114
L H G A++ DCC+ YT R + + + N C +IF TKK CANP
Sbjct: 17 LLHLCGESEASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANP 76
Query: 115 SDKQVQVCVRML 126
V+ VR+L
Sbjct: 77 KQTWVKYIVRLL 88
>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens]
Length = 96
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 66 ATSADCCISYTPRSIPCSLLESYFE--TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCV 123
A++ DCC+ YT R + + + N C +IF TKK CANP V+ V
Sbjct: 27 ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 86
Query: 124 RML 126
R+L
Sbjct: 87 RLL 89
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 42.0 bits (97), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 127
CC S+ + IP + Y T+S CS G+IF K+G+ CA + VQ +ML+
Sbjct: 33 CCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,897,660
Number of Sequences: 37866
Number of extensions: 191452
Number of successful extensions: 347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 297
Number of HSP's gapped (non-prelim): 45
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.