Search of human proteins with 224967054

Search of human proteins with 224967054

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224967054 SRY (sex determining region Y)-box 6 isoform 4
[Homo sapiens]
         (841 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...  1684   0.0  
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...  1600   0.0  
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...  1540   0.0  
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...  1538   0.0  
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...   830   0.0  
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...   828   0.0  
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...   427   e-119
gi|41406089 SRY-box 13 [Homo sapiens]                                 232   1e-60
gi|11967991 SRY-box 17 [Homo sapiens]                                 109   1e-23
gi|13899269 SRY-box 7 [Homo sapiens]                                  105   2e-22
gi|8924248 SRY-box 18 [Homo sapiens]                                  104   4e-22
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]        103   5e-22
gi|4507161 SRY-box 11 [Homo sapiens]                                  103   9e-22
gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]       102   2e-21
gi|4759162 SRY-box 14 [Homo sapiens]                                  100   4e-21
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]      100   6e-21
gi|28195386 sex-determining region Y-box 2 [Homo sapiens]             100   7e-21
gi|5902108 SRY-box 21 [Homo sapiens]                                   99   1e-20
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]        99   2e-20
gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]        98   4e-20
gi|4557853 transcription factor SOX9 [Homo sapiens]                    97   5e-20
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]        97   5e-20
gi|4507225 sex determining region Y [Homo sapiens]                     97   8e-20
gi|5902106 SRY-box 15 [Homo sapiens]                                   95   2e-19
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    88   4e-17
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    83   9e-16
gi|112421108 capicua homolog [Homo sapiens]                            68   3e-11
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]    66   2e-10
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]    66   2e-10
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]    66   2e-10

>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 1684 bits (4360), Expect = 0.0
 Identities = 841/841 (100%), Positives = 841/841 (100%)

Query: 1   MKGHGELQGHERRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIM 60
           MKGHGELQGHERRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIM
Sbjct: 1   MKGHGELQGHERRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIM 60

Query: 61  HNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSR 120
           HNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSR
Sbjct: 61  HNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSR 120

Query: 121 DREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMER 180
           DREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMER
Sbjct: 121 DREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMER 180

Query: 181 LNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQM 240
           LNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQM
Sbjct: 181 LNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQM 240

Query: 241 DLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQ 300
           DLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQ
Sbjct: 241 DLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQ 300

Query: 301 GFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFG 360
           GFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFG
Sbjct: 301 GFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFG 360

Query: 361 RNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEK 420
           RNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEK
Sbjct: 361 RNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEK 420

Query: 421 RGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSP 480
           RGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSP
Sbjct: 421 RGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSP 480

Query: 481 IGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLS 540
           IGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLS
Sbjct: 481 IGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLS 540

Query: 541 SINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAA 600
           SINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAA
Sbjct: 541 SINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAA 600

Query: 601 KLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMH 660
           KLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMH
Sbjct: 601 KLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMH 660

Query: 661 NSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRI 720
           NSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRI
Sbjct: 661 NSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRI 720

Query: 721 GEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSA 780
           GEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSA
Sbjct: 721 GEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSA 780

Query: 781 SPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSA 840
           SPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSA
Sbjct: 781 SPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSA 840

Query: 841 N 841
           N
Sbjct: 841 N 841


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 1600 bits (4143), Expect = 0.0
 Identities = 808/828 (97%), Positives = 808/828 (97%), Gaps = 20/828 (2%)

Query: 14  MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 73
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60

Query: 74  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 133
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120

Query: 134 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 193
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180

Query: 194 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 253
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240

Query: 254 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 313
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300

Query: 314 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 373
           DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS
Sbjct: 301 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 360

Query: 374 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 433
           YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 361 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 420

Query: 434 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 493
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI
Sbjct: 421 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDI 480

Query: 494 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 553
           LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE
Sbjct: 481 LSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNE 540

Query: 554 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGA 613
           KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAE                    GGA
Sbjct: 541 KERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAE--------------------GGA 580

Query: 614 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 673
           TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK
Sbjct: 581 TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK 640

Query: 674 SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE 733
           SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE
Sbjct: 641 SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE 700

Query: 734 MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY 793
           MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY
Sbjct: 701 MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY 760

Query: 794 GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841
           GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
Sbjct: 761 GMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 808


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 1540 bits (3987), Expect = 0.0
 Identities = 788/843 (93%), Positives = 788/843 (93%), Gaps = 55/843 (6%)

Query: 13  RMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTL 72
           RMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTL
Sbjct: 3   RMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTL 62

Query: 73  VSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGT 132
           VSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGT
Sbjct: 63  VSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGT 122

Query: 133 PERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKG 192
           PERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKG
Sbjct: 123 PERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKG 182

Query: 193 TPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIAR 252
           TPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIAR
Sbjct: 183 TPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIAR 242

Query: 253 QQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP 312
           QQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
Sbjct: 243 QQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP 302

Query: 313 GDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGH 372
           GDNYPVQFIPSTMAAAAASGLSPLQLQ                                 
Sbjct: 303 GDNYPVQFIPSTMAAAAASGLSPLQLQ--------------------------------- 329

Query: 373 SYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDE 432
                   QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDE
Sbjct: 330 --------QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDE 381

Query: 433 AAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL- 491
           AAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL 
Sbjct: 382 AAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLG 441

Query: 492 -------------DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGK 538
                        DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGK
Sbjct: 442 KWKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGK 501

Query: 539 LSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGS 598
           LSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGS
Sbjct: 502 LSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGS 561

Query: 599 AAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPD 658
           AAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPD
Sbjct: 562 AAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPD 621

Query: 659 MHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKL 718
           MHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKL
Sbjct: 622 MHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKL 681

Query: 719 RIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSST 778
           RIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSST
Sbjct: 682 RIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSST 741

Query: 779 SASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAV 838
           SASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAV
Sbjct: 742 SASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAV 801

Query: 839 SAN 841
           SAN
Sbjct: 802 SAN 804


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 1538 bits (3982), Expect = 0.0
 Identities = 787/842 (93%), Positives = 787/842 (93%), Gaps = 55/842 (6%)

Query: 14  MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 73
           MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
Sbjct: 1   MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV 60

Query: 74  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 133
           STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
Sbjct: 61  STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP 120

Query: 134 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 193
           ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
Sbjct: 121 ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT 180

Query: 194 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 253
           PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
Sbjct: 181 PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ 240

Query: 254 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 313
           QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
Sbjct: 241 QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG 300

Query: 314 DNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHS 373
           DNYPVQFIPSTMAAAAASGLSPLQLQ                                  
Sbjct: 301 DNYPVQFIPSTMAAAAASGLSPLQLQ---------------------------------- 326

Query: 374 YNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 433
                  QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA
Sbjct: 327 -------QLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEA 379

Query: 434 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL-- 491
           AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL  
Sbjct: 380 AAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLGK 439

Query: 492 ------------DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 539
                       DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL
Sbjct: 440 WKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKL 499

Query: 540 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSA 599
           SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSA
Sbjct: 500 SSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSA 559

Query: 600 AKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 659
           AKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM
Sbjct: 560 AKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDM 619

Query: 660 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 719
           HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR
Sbjct: 620 HNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLR 679

Query: 720 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 779
           IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS
Sbjct: 680 IGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTS 739

Query: 780 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 839
           ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS
Sbjct: 740 ASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVS 799

Query: 840 AN 841
           AN
Sbjct: 800 AN 801


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score =  830 bits (2144), Expect = 0.0
 Identities = 482/839 (57%), Positives = 573/839 (68%), Gaps = 98/839 (11%)

Query: 13  RMSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELP 70
           RMSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE  
Sbjct: 13  RMSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQ 68

Query: 71  TLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVT 129
            +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S  
Sbjct: 69  PVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTA 128

Query: 130 FGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGE 189
            GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GE
Sbjct: 129 LGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GE 187

Query: 190 IKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQ 249
           IKGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQ
Sbjct: 188 IKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQ 247

Query: 250 IARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGIT 309
           IARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +
Sbjct: 248 IARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFS 305

Query: 310 YKPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDT 365
           YK G  D YPVQ IP+TMAAAAA+  GL PLQLQ                          
Sbjct: 306 YKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ-------------------------- 339

Query: 366 FEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSP 425
                          QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP
Sbjct: 340 ---------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSP 383

Query: 426 VTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSL 485
             + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +    
Sbjct: 384 PPKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPS 441

Query: 486 GRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNM 545
            R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++
Sbjct: 442 ARVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSL 487

Query: 546 GLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQY 605
           GLN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++GS             
Sbjct: 488 GLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGS------------- 534

Query: 606 YCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS 665
                  A V+E+R+YR++RGR S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS
Sbjct: 535 -------AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNIS 587

Query: 666 KILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQ 725
           KILGSRWK+M+N EKQPYYEEQARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK 
Sbjct: 588 KILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKA 647

Query: 726 LMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPS 785
           +MR+RRQEMRQ+F VGQQ QIPI T  GVVYPGAI MA   PSP + S+ SS S+SPEP 
Sbjct: 648 IMRNRRQEMRQYFNVGQQAQIPIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPG 705

Query: 786 LPVIQSTYGMKTDGGSLAGN---EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841
           +PVIQSTYG+K +   +      E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 706 MPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 763


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score =  828 bits (2139), Expect = 0.0
 Identities = 481/838 (57%), Positives = 572/838 (68%), Gaps = 98/838 (11%)

Query: 14  MSSKQATSPFACAADGEDAMTQDLTSREK--EEGSDQHVASHLPLHPIMHNKPHSEELPT 71
           MSSK+  SP+   ADGE AM   +TSR+K  EE SD   A HLPLH    NKPHSEE   
Sbjct: 1   MSSKRPASPYG-EADGEVAM---VTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQP 56

Query: 72  LVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDR-EIMTSVTF 130
           +    Q+     +  S    ME + NK+ S ++  N+STSP K +EG R   E ++S   
Sbjct: 57  VSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTAL 116

Query: 131 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 190
           GTPERRKGSLADVVDTLKQ+K+EE+ + E E++  +EKLLSKDWK+K+  + +    GEI
Sbjct: 117 GTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNF-GEI 175

Query: 191 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 250
           KGTPESLAEKERQL  MI QL SLREQLLAAHDEQKKLAASQIEKQRQQM+LA+QQQEQI
Sbjct: 176 KGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQI 235

Query: 251 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 310
           ARQQQQLLQQQHKINLLQQQIQVQG +PPLMIP+FP DQRTLAAAA  QQGFL PPG +Y
Sbjct: 236 ARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAA--QQGFLLPPGFSY 293

Query: 311 KPG--DNYPVQFIPSTMAAAAAS--GLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTF 366
           K G  D YPVQ IP+TMAAAAA+  GL PLQLQ                           
Sbjct: 294 KAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQ--------------------------- 326

Query: 367 EHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPV 426
                         QLYAAQLA+MQVSPG K+P  PQ  N    VSPT I  +K   SP 
Sbjct: 327 --------------QLYAAQLAAMQVSPGGKLPGIPQG-NLGAAVSPTSIHTDKSTNSPP 371

Query: 427 TQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLG 486
            + KDE A QPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     
Sbjct: 372 PKSKDEVA-QPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSA 429

Query: 487 RGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMG 546
           R S++  L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++G
Sbjct: 430 RVSTIGYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLG 475

Query: 547 LNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYY 606
           LN+CR EKE+T  E+L  QL  K NE+GK    ++D     D++GS              
Sbjct: 476 LNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGS-------------- 521

Query: 607 CWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISK 666
                 A V+E+R+YR++RGR S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISK
Sbjct: 522 ------AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISK 575

Query: 667 ILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQL 726
           ILGSRWK+M+N EKQPYYEEQARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +
Sbjct: 576 ILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAI 635

Query: 727 MRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSL 786
           MR+RRQEMRQ+F VGQQ QIPI T  GVVYPGAI MA   PSP + S+ SS S+SPEP +
Sbjct: 636 MRNRRQEMRQYFNVGQQAQIPIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGM 693

Query: 787 PVIQSTYGMKTDGGSLAGN---EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841
           PVIQSTYG+K +   +      E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 694 PVIQSTYGVKGEEPHIKEEIQAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 750


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score =  427 bits (1098), Expect = e-119
 Identities = 235/413 (56%), Positives = 290/413 (70%), Gaps = 41/413 (9%)

Query: 432 EAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSL 491
           +  AQPLNLS++PKT++  KSPTSPT    PA + +    P K+S+P+ +     R S++
Sbjct: 3   DEVAQPLNLSAKPKTSDG-KSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTI 61

Query: 492 DILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCR 551
             L+         D D V KAIQEAR+M+EQ++REQQ      +DGK++ +N++GLN+CR
Sbjct: 62  GYLN---------DHDAVTKAIQEARQMKEQLRREQQV-----LDGKVAVVNSLGLNNCR 107

Query: 552 NEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTG 611
            EKE+T  E+L  QL  K NE+GK    ++D     D++GS                   
Sbjct: 108 TEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGS------------------- 148

Query: 612 GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 671
            A V+E+R+YR++RGR S+EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR
Sbjct: 149 -AGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 207

Query: 672 WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRR 731
           WK+M+N EKQPYYEEQARLSK HLEKYP+YKYKPRPKRTC+VDGKKLRIGEYK +MR+RR
Sbjct: 208 WKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRR 267

Query: 732 QEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQS 791
           QEMRQ+F VGQQ QIPI T  GVVYPGAI MA   PSP + S+ SS S+SPEP +PVIQS
Sbjct: 268 QEMRQYFNVGQQAQIPIAT-AGVVYPGAIAMA-GMPSPHLPSEHSSVSSSPEPGMPVIQS 325

Query: 792 TYGMKTDGGSLAGN---EMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN 841
           TYG+K +   +      E INGE   E YD+ EDDP  DY S++E   A  AN
Sbjct: 326 TYGVKGEEPHIKEEIQAEDINGEIYDE-YDEEEDDPDVDYGSDSENHIAGQAN 377


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score =  232 bits (591), Expect = 1e-60
 Identities = 163/413 (39%), Positives = 217/413 (52%), Gaps = 78/413 (18%)

Query: 420 KRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPS 479
           KR  +  T    +  +QPLNL+++PK  E   + +SP+             L   S +P 
Sbjct: 275 KRPGAMATHHPLQEPSQPLNLTAKPKAPELPNTSSSPS-------------LKMSSCVPR 321

Query: 480 PIGGSLGRGSSLDILSSLNSPAL--FGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDG 537
           P       G + D+ SS  S  L   G+ D V KAIQ+AR++               +DG
Sbjct: 322 PPSHG---GPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHS--------HSGALDG 370

Query: 538 KLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNG 597
             ++     L S  +   + R E            DG + P        E+A  S  M+G
Sbjct: 371 SPNTPFRKDLISLDSSPAKERLE------------DGCVHP-------LEEAMLSCDMDG 411

Query: 598 SAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFP 657
           S                    R + ++R  +    HIKRPMNAFMVWAKDERRKILQAFP
Sbjct: 412 S--------------------RHFPESRNSS----HIKRPMNAFMVWAKDERRKILQAFP 447

Query: 658 DMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 717
           DMHNS+ISKILGSRWKSM+NQEKQPYYEEQARLS+ HLEKYP+YKYKPRPKRTCIV+GK+
Sbjct: 448 DMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKR 507

Query: 718 LRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSS 777
           LR+GEYK LMR+RRQ+ RQ + +  Q      + + V+YP A  M    P  +       
Sbjct: 508 LRVGEYKALMRTRRQDARQSYVIPPQAGQVQMSSSDVLYPRAAGMPLAQPLVE-----HY 562

Query: 778 TSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMY---DDYEDDPKSD 827
              S +P++PVI +T  ++ +G        +  + EM  Y   +D E + KSD
Sbjct: 563 VPRSLDPNMPVIVNTCSLREEGEGTDDRHSV-ADGEMYRYSEDEDSEGEEKSD 614



 Score =  162 bits (411), Expect = 9e-40
 Identities = 99/196 (50%), Positives = 128/196 (65%), Gaps = 6/196 (3%)

Query: 131 GTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEI 190
           G+PE ++  +++     ++K   +  R  +E    +EKLLS DWKE+    N+ E   ++
Sbjct: 82  GSPEPKRPGVSEAASGSQEKL--DFNRNLKEVVPAIEKLLSSDWKERFLGRNSMEAK-DV 138

Query: 191 KGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQI 250
           KGT ESLAEKE QL  MI QL +LR+QLL AH EQK +AA   EKQ+QQM+LARQQQEQI
Sbjct: 139 KGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQI 198

Query: 251 ARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITY 310
           A+QQQQL+QQQHKINLLQQQIQ Q +MP +MIP FP   + L     +Q      P I  
Sbjct: 199 AKQQQQLIQQQHKINLLQQQIQ-QVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQP-IPC 256

Query: 311 KPGDNYPVQFIPSTMA 326
           KP + YP+Q + S  A
Sbjct: 257 KPVE-YPLQLLHSPPA 271


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score =  109 bits (272), Expect = 1e-23
 Identities = 48/98 (48%), Positives = 68/98 (69%)

Query: 612 GATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 671
           G   A +     A GRA  E  I+RPMNAFMVWAKDER+++ Q  PD+HN+ +SK+LG  
Sbjct: 46  GEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKS 105

Query: 672 WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 709
           WK+++  EK+P+ EE  RL   H++ +PNYKY+PR ++
Sbjct: 106 WKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRK 143


>gi|13899269 SRY-box 7 [Homo sapiens]
          Length = 388

 Score =  105 bits (262), Expect = 2e-22
 Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 600 AKLQQYYCWPTGGATVAEARVYRDAR---------GRASSEPHIKRPMNAFMVWAKDERR 650
           A L   Y WP G    A      D +         G   SE  I+RPMNAFMVWAKDER+
Sbjct: 2   ASLLGAYPWPEGLECPALDAELSDGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERK 61

Query: 651 KILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKR 709
           ++    PD+HN+ +SK+LG  WK+++  +K+PY +E  RL   H++ YPNYKY+PR K+
Sbjct: 62  RLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKK 120


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score =  104 bits (259), Expect = 4e-22
 Identities = 45/83 (54%), Positives = 62/83 (74%)

Query: 627 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 686
           +A+ E  I+RPMNAFMVWAKDER+++ Q  PD+HN+ +SK+LG  WK ++  EK+P+ EE
Sbjct: 78  QAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEE 137

Query: 687 QARLSKIHLEKYPNYKYKPRPKR 709
             RL   HL  +PNYKY+PR K+
Sbjct: 138 AERLRVQHLRDHPNYKYRPRRKK 160


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score =  103 bits (258), Expect = 5e-22
 Identities = 49/100 (49%), Positives = 64/100 (64%)

Query: 609 PTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKIL 668
           PT G+T +      D     +   HIKRPMNAFMVW++ ERRKI++  PDMHN+ ISK L
Sbjct: 34  PTPGSTASTGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRL 93

Query: 669 GSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPK 708
           G RWK + + +K P+  E  RL   H+  YP+YKY+PR K
Sbjct: 94  GKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKK 133


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score =  103 bits (256), Expect = 9e-22
 Identities = 46/76 (60%), Positives = 56/76 (73%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           HIKRPMNAFMVW+K ERRKI++  PDMHN+ ISK LG RWK + + EK P+  E  RL  
Sbjct: 48  HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRL 107

Query: 693 IHLEKYPNYKYKPRPK 708
            H+  YP+YKY+PR K
Sbjct: 108 KHMADYPDYKYRPRKK 123


>gi|30179900 SRY (sex determining region Y)-box 1 [Homo sapiens]
          Length = 391

 Score =  102 bits (253), Expect = 2e-21
 Identities = 44/92 (47%), Positives = 65/92 (70%)

Query: 626 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 685
           G  +++  +KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK MS  EK+P+ +
Sbjct: 43  GAKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFID 102

Query: 686 EQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 717
           E  RL  +H++++P+YKY+PR K   ++   K
Sbjct: 103 EAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK 134


>gi|4759162 SRY-box 14 [Homo sapiens]
          Length = 240

 Score =  100 bits (250), Expect = 4e-21
 Identities = 44/76 (57%), Positives = 58/76 (76%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           HIKRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK +S  EK+PY +E  RL  
Sbjct: 7   HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRA 66

Query: 693 IHLEKYPNYKYKPRPK 708
            H++++P+YKY+PR K
Sbjct: 67  QHMKEHPDYKYRPRRK 82


>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
          Length = 315

 Score =  100 bits (249), Expect = 6e-21
 Identities = 44/76 (57%), Positives = 56/76 (73%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           HIKRPMNAFMVW++ ERRKI+  +PDMHN+ ISK LG RW+ + + EK P+  E  RL  
Sbjct: 39  HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 98

Query: 693 IHLEKYPNYKYKPRPK 708
            H+  YP+YKY+PR K
Sbjct: 99  KHMADYPDYKYRPRKK 114


>gi|28195386 sex-determining region Y-box 2 [Homo sapiens]
          Length = 317

 Score =  100 bits (248), Expect = 7e-21
 Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 6/108 (5%)

Query: 611 GGATVAEARVYRDARGRASSEP-HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILG 669
           GG + A A     A G   + P  +KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG
Sbjct: 22  GGNSTAAA-----AGGNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLG 76

Query: 670 SRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 717
           + WK +S  EK+P+ +E  RL  +H++++P+YKY+PR K   ++   K
Sbjct: 77  AEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK 124


>gi|5902108 SRY-box 21 [Homo sapiens]
          Length = 276

 Score = 99.4 bits (246), Expect = 1e-20
 Identities = 41/76 (53%), Positives = 59/76 (77%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           H+KRPMNAFMVW++ +RRK+ Q  P MHNS ISK LG+ WK ++  EK+P+ +E  RL  
Sbjct: 7   HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRA 66

Query: 693 IHLEKYPNYKYKPRPK 708
           +H++++P+YKY+PR K
Sbjct: 67  MHMKEHPDYKYRPRRK 82


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 42/92 (45%), Positives = 64/92 (69%)

Query: 626 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 685
           G  + +  +KRPMNAFMVW++ +RRK+    P MHNS ISK LG+ WK +++ EK+P+ +
Sbjct: 131 GGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFID 190

Query: 686 EQARLSKIHLEKYPNYKYKPRPKRTCIVDGKK 717
           E  RL  +H+++YP+YKY+PR K   ++   K
Sbjct: 191 EAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDK 222


>gi|30179903 SRY (sex determining region Y)-box 8 [Homo sapiens]
          Length = 446

 Score = 97.8 bits (242), Expect = 4e-20
 Identities = 40/85 (47%), Positives = 60/85 (70%)

Query: 626 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 685
           G   ++PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ +S  EK+P+ E
Sbjct: 94  GALKAKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVE 153

Query: 686 EQARLSKIHLEKYPNYKYKPRPKRT 710
           E  RL   H + +P+YKY+PR +++
Sbjct: 154 EAERLRVQHKKDHPDYKYQPRRRKS 178


>gi|4557853 transcription factor SOX9 [Homo sapiens]
          Length = 509

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 39/85 (45%), Positives = 61/85 (71%)

Query: 626 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 685
           G + ++PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ ++  EK+P+ E
Sbjct: 97  GSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVE 156

Query: 686 EQARLSKIHLEKYPNYKYKPRPKRT 710
           E  RL   H + +P+YKY+PR +++
Sbjct: 157 EAERLRVQHKKDHPDYKYQPRRRKS 181


>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
          Length = 466

 Score = 97.4 bits (241), Expect = 5e-20
 Identities = 39/84 (46%), Positives = 60/84 (71%)

Query: 626 GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE 685
           G + S+PH+KRPMNAFMVWA+  RRK+   +P +HN+ +SK LG  W+ ++  +K+P+ E
Sbjct: 96  GASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIE 155

Query: 686 EQARLSKIHLEKYPNYKYKPRPKR 709
           E  RL   H + +P+YKY+PR ++
Sbjct: 156 EAERLRMQHKKDHPDYKYQPRRRK 179


>gi|4507225 sex determining region Y [Homo sapiens]
          Length = 204

 Score = 96.7 bits (239), Expect = 8e-20
 Identities = 41/82 (50%), Positives = 59/82 (71%)

Query: 627 RASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEE 686
           + + +  +KRPMNAF+VW++D+RRK+    P M NS ISK LG +WK ++  EK P+++E
Sbjct: 53  KGNVQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQE 112

Query: 687 QARLSKIHLEKYPNYKYKPRPK 708
             +L  +H EKYPNYKY+PR K
Sbjct: 113 AQKLQAMHREKYPNYKYRPRRK 134


>gi|5902106 SRY-box 15 [Homo sapiens]
          Length = 233

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 42/75 (56%), Positives = 54/75 (72%)

Query: 634 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 693
           +KRPMNAFMVW+  +RR++ Q  P MHNS ISK LG++WK +   EK+P+ EE  RL   
Sbjct: 49  VKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRAR 108

Query: 694 HLEKYPNYKYKPRPK 708
           HL  YP+YKY+PR K
Sbjct: 109 HLRDYPDYKYRPRRK 123


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 13/192 (6%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W  +S ++K+PYY+E  ++ +
Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395

Query: 693 IHLEKYPNYKYKPRP--KRTCIVDGKKLRIGEYKQLMRSRRQEM-----RQFFTVGQQPQ 745
            H E++P + Y+PRP  ++   +    +  G  + ++ +    +       +  V    Q
Sbjct: 396 KHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQ 455

Query: 746 IPITTGTGVVYPG--AITMATTTPSPQMTSDCSSTSAS----PEPSLPVIQSTYGMKTDG 799
            PIT   G   P     T A  +PSP      S +SA+     +PSLPV  +    +  G
Sbjct: 456 NPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTG 515

Query: 800 GSLAGNEMINGE 811
            S      ++ E
Sbjct: 516 PSQTDTHQLHSE 527


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 83.2 bits (204), Expect = 9e-16
 Identities = 34/75 (45%), Positives = 52/75 (69%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           H+KRPMNAFMVWA+  R  + +A P  +N+ IS  LG  W  +S ++K+PYY+E  ++ +
Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395

Query: 693 IHLEKYPNYKYKPRP 707
            H E++P + Y+PRP
Sbjct: 396 KHREEFPGWVYQPRP 410


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 29/89 (32%), Positives = 54/89 (60%)

Query: 633 HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK 692
           HI+RPMNAFM+++K  R  + Q  P+  N  +SKILG  W ++  +EKQ Y++   ++ +
Sbjct: 199 HIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKE 258

Query: 693 IHLEKYPNYKYKPRPKRTCIVDGKKLRIG 721
            H + +P++K+  + ++    + K   +G
Sbjct: 259 AHFKAHPDWKWCNKDRKKSSSEAKPTSLG 287



 Score = 30.4 bits (67), Expect = 7.2
 Identities = 54/208 (25%), Positives = 69/208 (33%), Gaps = 48/208 (23%)

Query: 303  LFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRN 362
            +  PG   K G    VQ+I  T+         P QLQ      P    +    S      
Sbjct: 810  ILQPGALGKAGGITQVQYILPTL---------PQQLQVAPAPAPAPGTKAAAPSGPAPTT 860

Query: 363  LDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAK-MPSTPQ-PPNTAGTVSPT------ 414
               F    G S N K         LA+   +PG   + S P  PP  A +VSP       
Sbjct: 861  SIRFTLPPGTSTNGKV--------LAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPG 912

Query: 415  GIKNEKRG------TSPVTQVKDEAAAQPLNLSSRP-----------------KTAEPVK 451
            G      G       +P   V+   A QPL L S P                  T  PV 
Sbjct: 913  GSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVPVS 972

Query: 452  SPTSPTQNLFPASKTSPVNLPNKSSIPS 479
            +P+     L PA+   P + P K  +PS
Sbjct: 973  TPSGLVPPLSPATLPGPTSQPQKVLLPS 1000


>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406

Query: 691 SKIHLEKYP------NYKYKPRPKR 709
            ++H++ YP      NY  K + KR
Sbjct: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383

Query: 691 SKIHLEKYP------NYKYKPRPKR 709
            ++H++ YP      NY  K + KR
Sbjct: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383

Query: 691 SKIHLEKYP------NYKYKPRPKR 709
            ++H++ YP      NY  K + KR
Sbjct: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.126    0.358 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,841,425
Number of Sequences: 37866
Number of extensions: 1773722
Number of successful extensions: 16114
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 649
Number of HSP's that attempted gapping in prelim test: 9054
Number of HSP's gapped (non-prelim): 4626
length of query: 841
length of database: 18,247,518
effective HSP length: 111
effective length of query: 730
effective length of database: 14,044,392
effective search space: 10252406160
effective search space used: 10252406160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.