Search of human proteins with 115430235

Search of human proteins with 115430235

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|115430235 ubiquitin-like with PHD and ring finger domains 1
isoform 1 [Homo sapiens]
         (793 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|115430235 ubiquitin-like with PHD and ring finger domains 1 i...  1649   0.0  
gi|115430233 ubiquitin-like with PHD and ring finger domains 1 i...  1649   0.0  
gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [H...   872   0.0  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              69   2e-11
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    62   2e-09
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    62   3e-09
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]      60   8e-09
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ...    60   8e-09
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    59   2e-08
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...    59   2e-08
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo...    58   3e-08
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)...    58   3e-08
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ...    58   4e-08
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ...    58   4e-08
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo...    58   4e-08
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo...    58   4e-08
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa...    57   9e-08
gi|38788333 remodeling and spacing factor 1 [Homo sapiens]             55   2e-07
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H...    55   3e-07
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H...    55   3e-07
gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]     55   3e-07
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    54   6e-07
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    54   6e-07
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    54   6e-07
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo...    54   7e-07
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H...    53   1e-06
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho...    53   1e-06
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H...    53   1e-06
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]             52   2e-06
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]             52   2e-06

>gi|115430235 ubiquitin-like with PHD and ring finger domains 1
           isoform 1 [Homo sapiens]
          Length = 793

 Score = 1649 bits (4271), Expect = 0.0
 Identities = 793/793 (100%), Positives = 793/793 (100%)

Query: 1   MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
           MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD
Sbjct: 1   MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60

Query: 61  YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR 120
           YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR
Sbjct: 61  YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR 120

Query: 121 PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE 180
           PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE
Sbjct: 121 PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE 180

Query: 181 DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD 240
           DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD
Sbjct: 181 DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD 240

Query: 241 AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP 300
           AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP
Sbjct: 241 AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP 300

Query: 301 SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 360
           SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC
Sbjct: 301 SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 360

Query: 361 PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP 420
           PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP
Sbjct: 361 PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP 420

Query: 421 IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG 480
           IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG
Sbjct: 421 IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG 480

Query: 481 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK 540
           SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK
Sbjct: 481 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK 540

Query: 541 GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK 600
           GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK
Sbjct: 541 GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK 600

Query: 601 LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG 660
           LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG
Sbjct: 601 LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG 660

Query: 661 SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE 720
           SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE
Sbjct: 661 SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE 720

Query: 721 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT 780
           TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT
Sbjct: 721 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT 780

Query: 781 VLNQLFPGYGNGR 793
           VLNQLFPGYGNGR
Sbjct: 781 VLNQLFPGYGNGR 793


>gi|115430233 ubiquitin-like with PHD and ring finger domains 1
           isoform 2 [Homo sapiens]
          Length = 806

 Score = 1649 bits (4271), Expect = 0.0
 Identities = 793/793 (100%), Positives = 793/793 (100%)

Query: 1   MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
           MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD
Sbjct: 14  MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 73

Query: 61  YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR 120
           YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR
Sbjct: 74  YEVRLNDTIQLLVRQSLVLPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDSR 133

Query: 121 PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE 180
           PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE
Sbjct: 134 PADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEE 193

Query: 181 DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD 240
           DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD
Sbjct: 194 DVIYHVKYDDYPENGVVQMNSRDVRARARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYD 253

Query: 241 AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP 300
           AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP
Sbjct: 254 AEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIERPGEGSPMVDNPMRRKSGP 313

Query: 301 SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 360
           SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC
Sbjct: 314 SCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYC 373

Query: 361 PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP 420
           PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP
Sbjct: 374 PECRNDASEVVLAGERLRESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGP 433

Query: 421 IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG 480
           IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG
Sbjct: 434 IPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTG 493

Query: 481 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK 540
           SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK
Sbjct: 494 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVK 553

Query: 541 GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK 600
           GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK
Sbjct: 554 GGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKK 613

Query: 601 LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG 660
           LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG
Sbjct: 614 LGLTMQYPEGYLEALANREREKENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAG 673

Query: 661 SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE 720
           SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE
Sbjct: 674 SPRRTSKKTKVEPYSLTAQQSSLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEE 733

Query: 721 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT 780
           TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT
Sbjct: 734 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQT 793

Query: 781 VLNQLFPGYGNGR 793
           VLNQLFPGYGNGR
Sbjct: 794 VLNQLFPGYGNGR 806


>gi|23312364 ubiquitin-like with PHD and ring finger domains 2 [Homo
           sapiens]
          Length = 802

 Score =  872 bits (2252), Expect = 0.0
 Identities = 445/832 (53%), Positives = 569/832 (68%), Gaps = 69/832 (8%)

Query: 1   MWIQVRTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYRGKQMEDGHTLFD 60
           MWIQVRT+DG +T T++ +SR   +EELR ++  LF V P  QRLFYRGKQ+E+G+TLFD
Sbjct: 1   MWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYRGKQLENGYTLFD 60

Query: 61  YEVRLNDTIQLLVRQSLV-LPHSTKERDSELSDTDSGCCLGQSESDKSSTHGEAAAETDS 119
           Y+V LND IQLLVR     LP ++ + +++       C     +  K+   G +   + S
Sbjct: 61  YDVGLNDIIQLLVRPDPDHLPGTSTQIEAK------PCSNSPPKVKKAPRVGPSNQPSTS 114

Query: 120 RPADEDMWDETELGLYKVNEYVDARDTNMGAWFEAQVVRVTR--------KAPSRD---- 167
             A      +   G+YKVNE VDARD  +GAWFEA +  VTR        K P ++    
Sbjct: 115 ARA---RLIDPGFGIYKVNELVDARDVGLGAWFEAHIHSVTRASDGQSRGKTPLKNGSSC 171

Query: 168 ------------------EPCSSTSRP---ALEEDVIYHVKYDDYPENGVVQMNSRDVRA 206
                             +   STS     A +EDVIYH++YD+YPE+G ++MN +D+R 
Sbjct: 172 KRTNGNIKHKSKENTNKLDSVPSTSNSDCVAADEDVIYHIQYDEYPESGTLEMNVKDLRP 231

Query: 207 RARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISR-KRETRTARELYANVVLG--D 263
           RARTI+KW +L VG VVM+NYN ++P +RGFW+DAEI+  K  +RT +EL   + LG  +
Sbjct: 232 RARTILKWNELNVGDVVMVNYNVESPGQRGFWFDAEITTLKTISRTKKELRVKIFLGGSE 291

Query: 264 DSLNDCRIIFVDEVFKIERPGEGS-PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCG 322
            +LNDC+II VDE+FKIERPG       D    R++ P C  C  D  + C  C+C +CG
Sbjct: 292 GTLNDCKIISVDEIFKIERPGAHPLSFADGKFLRRNDPECDLCGGDPEKKCHSCSCRVCG 351

Query: 323 GRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLAGERLRESKK 382
           G+ +P+ QL+CDEC++A+HIYCL+PPL  VP E+ WYCP C+ D+SEVV AGERL+ SKK
Sbjct: 352 GKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKMSKK 411

Query: 383 KAKMASATSSSQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTMWRFRVQVSESGVH 442
           KAKM SA++ S+RDWG+GMACVGRT+ECTIVPSNHYGPIPGIPVG+ WRFRVQVSE+GVH
Sbjct: 412 KAKMPSASTESRRDWGRGMACVGRTRECTIVPSNHYGPIPGIPVGSTWRFRVQVSEAGVH 471

Query: 443 RPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLT 502
           RPHV GIHGRSNDGAYSLVLAGG+ D+VD G+ FTYTGSGG++L+GNKR    S DQ LT
Sbjct: 472 RPHVGGIHGRSNDGAYSLVLAGGFADEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLT 531

Query: 503 NTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVV 562
           N NRALALNC AP++D+ GAE+++WR+GKPVRV+R+ KG K SKYAP EGNRYDGIYKVV
Sbjct: 532 NMNRALALNCDAPLDDKIGAESRNWRAGKPVRVIRSFKGRKISKYAPEEGNRYDGIYKVV 591

Query: 563 KYWPEKGKS-GFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANRERE 621
           KYWPE   S GFLVWRYLLRRDD EP PWT EG +R ++L L +QYP GY       ++E
Sbjct: 592 KYWPEISSSHGFLVWRYLLRRDDVEPAPWTSEGIERSRRLCLRLQYPAGY-----PSDKE 646

Query: 622 KENSKREEEEQQEGGFASPRTGKGKWKRKSAGGGPSRAGSPRRTSKKTKVEPYSLTAQQS 681
            +  K + ++Q  G    P          S    PS +   + +     +E + LT QQ 
Sbjct: 647 GKKPKGQSKKQPSGTTKRP---------ISDDDCPSASKVYKASDSAEAIEAFQLTPQQQ 697

Query: 682 SLIREDKSNAKLWNEVLASLKDRPASGSPFQLFLSKVEETFQCICCQELVFRPITTVCQH 741
            LIRED  N KLW+EVL+ L + P        FL K+E++F C+CCQELV++P+TT C H
Sbjct: 698 HLIREDCQNQKLWDEVLSHLVEGPN-------FLKKLEQSFMCVCCQELVYQPVTTECFH 750

Query: 742 NVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVLNQLFPGYGNGR 793
           NVCKDCL RSF+AQVFSCPACR+DLG++Y M  N+ LQT+L+  FPGY  GR
Sbjct: 751 NVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLDLFFPGYSKGR 802


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLAGERL 377
           C +CG     D+ L+CD CD  +H+ CLDPPL  VP  DEW+CPEC   A  VVLA +  
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVP-VDEWFCPECA--APGVVLAADAG 242

Query: 378 RESKKKAKMASA----TSSSQRDWGKGMACVGRTKE 409
             S+++  +  A    T+S  R        + RT++
Sbjct: 243 PVSEEEVSLLLADVVPTTSRLRPRAGRTRAIARTRQ 278


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)

Query: 313  CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            C  C  C +CG   DP + L+CD+CD+++H YCLDPPL +VP +  W C  C
Sbjct: 1424 CVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVP-KGGWKCKWC 1474



 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)

Query: 295 RRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPS 354
           R+++G  C  CK           C  C    +  K L+C+ CD  +H +CL PP+  +P+
Sbjct: 263 RKRAGWQCPECK----------VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPA 312

Query: 355 EDEWYCPECR 364
              W C  CR
Sbjct: 313 H-SWKCKACR 321



 Score = 37.4 bits (85), Expect = 0.055
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 318  CHLCG--GRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            C +CG  GR      L C +C   +H YC++  ++ V     W C EC
Sbjct: 1380 CVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVEC 1427



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 364
           C +C G  +      C  C   +H  CLD  L++      W CPEC+
Sbjct: 229 CAVCEGPGELCDLFFCTSCGHHYHGACLDTALTA-RKRAGWQCPECK 274


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 313  CRVCA-CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            C  C  C  CG   DP + L+CD+CD+++H YCLDPPL +VP +  W C  C
Sbjct: 1004 CLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVP-KGGWKCKWC 1054



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 11/69 (15%)

Query: 296 RKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSE 355
           +++G  C  CK           C  C    +  K L+CD CD  +H +CL P + SVP+ 
Sbjct: 379 KRAGWQCPECK----------VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPT- 427

Query: 356 DEWYCPECR 364
           + W C  CR
Sbjct: 428 NGWKCKNCR 436



 Score = 36.2 bits (82), Expect = 0.12
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 318  CHLCG--GRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            C +CG  G+    + L C +C   +H YC+   ++ V     W C EC
Sbjct: 960  CVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLEC 1007


>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
          Length = 1544

 Score = 60.1 bits (144), Expect = 8e-09
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C LCG   D D+ L+CD CD ++H +CL PPL  VP  D W CP+C
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 356



 Score = 30.0 bits (66), Expect = 8.8
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 314  RVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDE----WYCPECR 364
            ++C C     +      + C+ C  AFH  C+     +VPS  +    W CP CR
Sbjct: 1177 KICLCQ----KAPAAPMIQCELCRDAFHTSCV-----AVPSISQGLRIWLCPHCR 1222


>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
           domain 1B (RBP2-like), partial [Homo sapiens]
          Length = 977

 Score = 60.1 bits (144), Expect = 8e-09
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C LCG   D D+ L+CD CD ++H +CL PPL  VP  D W CP+C
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 356


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 1690

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 275 DEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCD 334
           DEV +  +    S   +  MR++ G    +  D       +  C  CG   + DK L+CD
Sbjct: 260 DEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVD-------LYVCMFCGRGNNEDKLLLCD 312

Query: 335 ECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            CD ++H +CL PPL  VP  D W CP+C
Sbjct: 313 GCDDSYHTFCLIPPLPDVPKGD-WRCPKC 340


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
           sapiens]
          Length = 1641

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 275 DEVFKIERPGEGSPMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCD 334
           DEV +  +    S   +  MR++ G    +  D       +  C  CG   + DK L+CD
Sbjct: 260 DEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVD-------LYVCMFCGRGNNEDKLLLCD 312

Query: 335 ECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
            CD ++H +CL PPL  VP  D W CP+C
Sbjct: 313 GCDDSYHTFCLIPPLPDVPKGD-WRCPKC 340


>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
            sapiens]
          Length = 1483

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 318  CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 364
            C +C  + + DK ++CDEC+ AFH++CL P L  VP + EW CP C+
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVP-DGEWQCPACQ 1232


>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
           [Homo sapiens]
          Length = 2073

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 41/123 (33%), Positives = 52/123 (42%), Gaps = 21/123 (17%)

Query: 313 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVV 371
           C+ C AC + G  ++ D  L CD CD  FH+ C DPPLS +P +  W C  CR       
Sbjct: 269 CKTCSACRVQG--RNADNMLFCDSCDRGFHMECCDPPLSRMP-KGMWICQVCRPKKKGRK 325

Query: 372 LAGERLRESKK---------KAKMASATSSSQRDWGKGMACVGR--------TKECTIVP 414
           L  E+  + K+         K K+     S   D G   A  GR        TK CT   
Sbjct: 326 LLHEKAAQIKRRYAKPIGRPKNKLKQRLLSVTSDEGSMNAFTGRGSPGRGQKTKVCTTPS 385

Query: 415 SNH 417
           S H
Sbjct: 386 SGH 388


>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
           [Homo sapiens]
          Length = 332

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 313 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASE 369
           C  C +C LCG  ++ D+ L CD+CD  +H+YCL PP++  P E  W C  C     E
Sbjct: 267 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAE-PPEGSWSCHLCLRHLKE 323


>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
           [Homo sapiens]
          Length = 414

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 313 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASE 369
           C  C +C LCG  ++ D+ L CD+CD  +H+YCL PP++  P E  W C  C     E
Sbjct: 349 CIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAE-PPEGSWSCHLCLRHLKE 405


>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
            [Homo sapiens]
          Length = 1524

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 318  CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 364
            C +C  + D +  ++CD CD   H YC+ P L +VP E +W+CPECR
Sbjct: 1119 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVP-EGDWFCPECR 1164


>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
            [Homo sapiens]
          Length = 1556

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 318  CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 364
            C +C  + D +  ++CD CD   H YC+ P L +VP E +W+CPECR
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVP-EGDWFCPECR 1196


>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
           sapiens]
          Length = 1954

 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)

Query: 288 PMVDNPMRRKSGPSCKHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 347
           P  D+    + G  C+  +DD    CRVC        +D  + L CD C  ++H++CL+P
Sbjct: 396 PKDDDDEEEEGG--CEEEEDDHMEFCRVC--------KDGGELLCCDACPSSYHLHCLNP 445

Query: 348 PLSSVPSEDEWYCPEC 363
           PL  +P+  EW CP C
Sbjct: 446 PLPEIPN-GEWLCPRC 460



 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 366
           C +C   Q   + ++CD C  A+H+ CLDP L   P E +W CP C  +
Sbjct: 346 CEVC---QQGGEIILCDTCPRAYHLVCLDPELEKAP-EGKWSCPHCEKE 390


>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
          Length = 1441

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDASEVVLAGERL 377
           C  CG    P+  L+CD CD  +H  CL PPL  +P + EW+CP C++      L  E+L
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIP-DGEWFCPPCQHK-----LLCEKL 947

Query: 378 RESKKKAKMASATSSSQRDWGKGMACVGRTKECTIVP 414
            E  +   +A           + +  VG + E  I P
Sbjct: 948 EEQLQDLDVALKKKERAERRKERLVYVGISIENIIPP 984


>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
           sapiens]
          Length = 1379

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C +C    + DK L+CD CD  +HI+CL PPL  +P +  W CP+C
Sbjct: 260 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIP-KGVWRCPKC 304


>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
           sapiens]
          Length = 1560

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C +C    + DK L+CD CD  +HI+CL PPL  +P +  W CP+C
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIP-KGVWRCPKC 371


>gi|5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens]
          Length = 391

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 313 CRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C  C  C++CG  ++ D+ L CD+CD  +H+YCL P +S  P E  W C  C
Sbjct: 324 CIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSE-PPEGSWSCHLC 374


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
           [Homo sapiens]
          Length = 2000

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 9/61 (14%)

Query: 303 KHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPE 362
           K  +DD    CRVC        +D  + L CD C  ++HI+CL+PPL  +P+  EW CP 
Sbjct: 449 KEEEDDHMEYCRVC--------KDGGELLCCDACISSYHIHCLNPPLPDIPN-GEWLCPR 499

Query: 363 C 363
           C
Sbjct: 500 C 500



 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 366
           C +C   Q   + ++CD C  A+H+ CLDP L   P E +W CP C  +
Sbjct: 382 CEVC---QQGGEIILCDTCPRAYHLVCLDPELDRAP-EGKWSCPHCEKE 426


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
           [Homo sapiens]
          Length = 1966

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 9/61 (14%)

Query: 303 KHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPE 362
           K  +DD    CRVC        +D  + L CD C  ++HI+CL+PPL  +P+  EW CP 
Sbjct: 449 KEEEDDHMEYCRVC--------KDGGELLCCDACISSYHIHCLNPPLPDIPN-GEWLCPR 499

Query: 363 C 363
           C
Sbjct: 500 C 500



 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 366
           C +C   Q   + ++CD C  A+H+ CLDP L   P E +W CP C  +
Sbjct: 382 CEVC---QQGGEIILCDTCPRAYHLVCLDPELDRAP-EGKWSCPHCEKE 426


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
           [Homo sapiens]
          Length = 2059

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 9/61 (14%)

Query: 303 KHCKDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPE 362
           K  +DD    CRVC        +D  + L CD C  ++HI+CL+PPL  +P+  EW CP 
Sbjct: 508 KEEEDDHMEYCRVC--------KDGGELLCCDACISSYHIHCLNPPLPDIPN-GEWLCPR 558

Query: 363 C 363
           C
Sbjct: 559 C 559



 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 366
           C +C   Q   + ++CD C  A+H+ CLDP L   P E +W CP C  +
Sbjct: 441 CEVC---QQGGEIILCDTCPRAYHLVCLDPELDRAP-EGKWSCPHCEKE 485


>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
            sapiens]
          Length = 2168

 Score = 53.5 bits (127), Expect = 7e-07
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 318  CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRNDAS-------EV 370
            C +C    + +  L+CD CD   H YC  P ++++P  D W+CP C   AS       ++
Sbjct: 1934 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGD-WFCPACIAKASGQTLKIKKL 1992

Query: 371  VLAGERLRESKKKAKMASATSSSQRD 396
             + G++  ESKK  K+     +   D
Sbjct: 1993 HVKGKKTNESKKGKKVTLTGDTEDED 2018


>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
           sapiens]
          Length = 1482

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C +C    + DK L CD CD  +HI+CL PPL  +P    W CP+C
Sbjct: 260 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIP-RGIWRCPKC 304


>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
           sapiens]
          Length = 1539

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C +C    + DK L CD CD  +HI+CL PPL  +P    W CP+C
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIP-RGIWRCPKC 361


>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
           sapiens]
          Length = 1570

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPEC 363
           C +C    + DK L CD CD  +HI+CL PPL  +P    W CP+C
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIP-RGIWRCPKC 361


>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
          Length = 888

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 317 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDE---WYCPECRNDAS---EV 370
           +C +C    D    L+CD C + +H+ CLDPPL+ +P + +   W C EC    S   E 
Sbjct: 727 SCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEA 786

Query: 371 VLAGERLRESKKKAK 385
            +A E L +  K+++
Sbjct: 787 DMAMETLPDGTKRSR 801



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 315 VCACHLCGGRQDPDKQLMCDECDMAFHIYCL------DPPLSSVP--SEDEWYCPECR 364
           +C   L    +D D+ + CD C +  H  C       D  +SS    S + W+C  C+
Sbjct: 321 ICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACK 378


>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
          Length = 948

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 317 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDE---WYCPECRNDAS---EV 370
           +C +C    D    L+CD C + +H+ CLDPPL+ +P + +   W C EC    S   E 
Sbjct: 727 SCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEA 786

Query: 371 VLAGERLRESKKKAK 385
            +A E L +  K+++
Sbjct: 787 DMAMETLPDGTKRSR 801



 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 318 CHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSED--EWYCPECRNDASE 369
           C  C G  D +  + CDEC + +H  CLDPPL   P +    W C EC + +S+
Sbjct: 871 CATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSSSSK 924



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 315 VCACHLCGGRQDPDKQLMCDECDMAFHIYCL------DPPLSSVP--SEDEWYCPECR 364
           +C   L    +D D+ + CD C +  H  C       D  +SS    S + W+C  C+
Sbjct: 321 ICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACK 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,100,399
Number of Sequences: 37866
Number of extensions: 1637154
Number of successful extensions: 8521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 7834
Number of HSP's gapped (non-prelim): 747
length of query: 793
length of database: 18,247,518
effective HSP length: 110
effective length of query: 683
effective length of database: 14,082,258
effective search space: 9618182214
effective search space used: 9618182214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.