Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PHF14 Sequence: fasta or formatted (888aa) NCBI GI: 55769548
Description:

PHD finger protein 14 isoform 2

Referenced in:

PHD Finger Proteins

Other entries for this name:
alt prot [948aa] PHD finger protein 14 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         58           3
 C cysteine            3.6         32           2
 D aspartate           7.7         68           2
 E glutamate          11.4        101           4
 F phenylalanine       1.7         15           2
 G glycine             5.1         45           2
 H histidine           1.5         13           1
 I isoleucine          3.4         30           2
 K lysine              9.3         83           4
 L leucine             7.2         64           4
 M methionine          2.0         18           1
 N asparagine          4.5         40           1
 P proline             4.8         43           2
 Q glutamine           4.1         36           2
 R arginine            6.3         56           2
 S serine              9.3         83           3
 T threonine           4.4         39           4
 V valine              4.2         37           2
 W tryptophan          1.0          9           1
 Y tyrosine            2.0         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PHD finger protein 14 isoform 2 
PHF14                 0.997   PHD finger protein 14 isoform 1 
MLLT10                0.066   myeloid/lymphoid or mixed-lineage leukemia transloca...
MLLT10                0.066   myeloid/lymphoid or mixed-lineage leukemia translocat...
MLLT6                 0.061   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PHF17                 0.060   PHD finger protein 17 long isoform 
PHF15                 0.060   PHD finger protein 15 
PHF17                 0.060   PHD finger protein 17 short isoform 
PHF16                 0.057   PHD finger protein 16 
PHF16                 0.057   PHD finger protein 16 
BRPF1                 0.050   bromodomain and PHD finger-containing protein 1 isof...
BRPF1                 0.050   bromodomain and PHD finger-containing protein 1 isof...
BRPF3                 0.050   bromodomain and PHD finger containing, 3 
BRD1                  0.047   bromodomain containing protein 1 
KDM4A                 0.037   jumonji domain containing 2A 
KDM4C                 0.036   jumonji domain containing 2C isoform 2 
KDM4C                 0.036   jumonji domain containing 2C isoform 1 
KDM4B                 0.034   jumonji domain containing 2B 
DSPP                  0.028   dentin sialophosphoprotein preproprotein 
EIF5B                 0.025   eukaryotic translation initiation factor 5B 
CDC2L2                0.024   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.024   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.024   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.024   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.024   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.024   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.023   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RPGR                  0.022   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYST4                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
BRD3                  0.021   bromodomain containing protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press