Guide to the Human Genome
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Name: PHACTR4 Sequence: fasta or formatted (712aa) NCBI GI: 115430209
Description:

phosphatase and actin regulator 4 isoform 2

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [702aa] phosphatase and actin regulator 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         46           3
 C cysteine            0.6          4           1
 D aspartate           4.4         31           2
 E glutamate          10.5         75           5
 F phenylalanine       2.1         15           1
 G glycine             3.4         24           2
 H histidine           2.1         15           1
 I isoleucine          4.5         32           2
 K lysine              7.4         53           3
 L leucine             8.0         57           2
 M methionine          1.7         12           1
 N asparagine          3.1         22           1
 P proline            12.5         89           3
 Q glutamine           3.8         27           2
 R arginine            6.6         47           2
 S serine             10.1         72           3
 T threonine           7.4         53           2
 V valine              3.9         28           2
 W tryptophan          0.7          5           1
 Y tyrosine            0.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.980   phosphatase and actin regulator 4 isoform 1 
PHACTR2               0.265   phosphatase and actin regulator 2 isoform 1 
PHACTR2               0.263   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.181   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.181   phosphatase and actin regulator 2 isoform 2 
PHACTR1               0.168   phosphatase and actin regulator 1 
PHACTR3               0.138   phosphatase and actin regulator 3 isoform 2 
PHACTR3               0.138   phosphatase and actin regulator 3 isoform 1 
PHACTR3               0.135   phosphatase and actin regulator 3 isoform 3 
MUC2                  0.033   mucin 2 precursor 
PRG4                  0.031   proteoglycan 4 isoform D 
PRG4                  0.031   proteoglycan 4 isoform C 
FLJ22184              0.031   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
GLTSCR1               0.031   glioma tumor suppressor candidate region gene 1 [Ho...
TTN                   0.029   titin isoform N2-A 
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
SOS1                  0.026   son of sevenless homolog 1 
PRG4                  0.026   proteoglycan 4 isoform B 
PRG4                  0.026   proteoglycan 4 isoform A 
NACA                  0.026   nascent polypeptide-associated complex alpha subuni...
WIPF2                 0.025   WIRE protein 
ZAN                   0.024   zonadhesin isoform 3 
ZAN                   0.024   zonadhesin isoform 6 
SETD1A                0.024   SET domain containing 1A 
WIPF1                 0.024   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.024   WAS/WASL interacting protein family, member 1 
ARAP1                 0.024   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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