Guide to the Human Genome
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Name: PHACTR3 Sequence: fasta or formatted (518aa) NCBI GI: 34304354
Description:

phosphatase and actin regulator 3 isoform 2

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [559aa] phosphatase and actin regulator 3 isoform 1
alt prot [448aa] phosphatase and actin regulator 3 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         38           2
 C cysteine            0.4          2           1
 D aspartate           5.6         29           2
 E glutamate           9.7         50           2
 F phenylalanine       1.4          7           1
 G glycine             4.1         21           2
 H histidine           1.5          8           1
 I isoleucine          3.1         16           2
 K lysine              8.9         46           3
 L leucine            10.4         54           3
 M methionine          1.5          8           2
 N asparagine          3.3         17           1
 P proline             7.7         40           3
 Q glutamine           5.0         26           2
 R arginine            9.7         50           2
 S serine              9.5         49           2
 T threonine           6.2         32           2
 V valine              3.1         16           1
 W tryptophan          0.8          4           1
 Y tyrosine            1.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 3 isoform 2 
PHACTR3               1.000   phosphatase and actin regulator 3 isoform 1 
PHACTR3               0.779   phosphatase and actin regulator 3 isoform 3 
PHACTR1               0.335   phosphatase and actin regulator 1 
PHACTR2               0.267   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.267   phosphatase and actin regulator 2 isoform 2 
PHACTR2               0.205   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.205   phosphatase and actin regulator 2 isoform 1 
PHACTR4               0.194   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.194   phosphatase and actin regulator 4 isoform 1 
NEFH                  0.031   neurofilament, heavy polypeptide 200kDa 
ENAH                  0.026   enabled homolog isoform a 
ENAH                  0.026   enabled homolog isoform b 
MAP4K4                0.025   mitogen-activated protein kinase kinase kinase kinas...
INCENP                0.024   inner centromere protein antigens 135/155kDa isofor...
MAP7D1                0.023   MAP7 domain containing 1 
TRIOBP                0.022   TRIO and F-actin binding protein isoform 6 
MAST4                 0.022   microtubule associated serine/threonine kinase fami...
INCENP                0.022   inner centromere protein antigens 135/155kDa isofor...
LOC100133599          0.022   PREDICTED: hypothetical protein 
CDC2L1                0.022   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RBM25                 0.021   RNA binding motif protein 25 
KIAA0182              0.021   genetic suppressor element 1 isoform 2 
KIAA0182              0.021   genetic suppressor element 1 isoform 1 
TCHH                  0.020   trichohyalin 
NOLC1                 0.020   nucleolar and coiled-body phosphoprotein 1 
MAP4K4                0.020   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.020   mitogen-activated protein kinase kinase kinase kinas...
MAP7D2                0.020   MAP7 domain containing 2 
CRKRS                 0.020   Cdc2-related kinase, arginine/serine-rich isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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