Guide to the Human Genome
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Name: PHACTR2 Sequence: fasta or formatted (634aa) NCBI GI: 154354974
Description:

phosphatase and actin regulator 2 isoform 3

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [645aa] phosphatase and actin regulator 2 isoform 1
alt prot [565aa] phosphatase and actin regulator 2 isoform 2
alt prot [554aa] phosphatase and actin regulator 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         45           2
 C cysteine            0.3          2           1
 D aspartate           5.4         34           2
 E glutamate          10.7         68           4
 F phenylalanine       1.9         12           1
 G glycine             5.7         36           1
 H histidine           1.3          8           1
 I isoleucine          3.0         19           1
 K lysine              9.6         61           3
 L leucine             6.8         43           2
 M methionine          0.9          6           1
 N asparagine          3.5         22           1
 P proline             9.1         58           4
 Q glutamine           3.5         22           2
 R arginine            6.8         43           3
 S serine             10.1         64           2
 T threonine           8.4         53           3
 V valine              4.6         29           2
 W tryptophan          0.6          4           1
 Y tyrosine            0.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.994   phosphatase and actin regulator 2 isoform 1 
PHACTR2               0.640   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.640   phosphatase and actin regulator 2 isoform 2 
PHACTR4               0.299   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.299   phosphatase and actin regulator 4 isoform 1 
PHACTR1               0.199   phosphatase and actin regulator 1 
PHACTR3               0.165   phosphatase and actin regulator 3 isoform 2 
PHACTR3               0.165   phosphatase and actin regulator 3 isoform 1 
PHACTR3               0.162   phosphatase and actin regulator 3 isoform 3 
NEFH                  0.036   neurofilament, heavy polypeptide 200kDa 
ZC3H18                0.032   zinc finger CCCH-type containing 18 
MUC2                  0.032   mucin 2 precursor 
CRKRS                 0.030   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.030   Cdc2-related kinase, arginine/serine-rich isoform 1...
NOLC1                 0.030   nucleolar and coiled-body phosphoprotein 1 
PRG4                  0.028   proteoglycan 4 isoform D 
PRG4                  0.028   proteoglycan 4 isoform C 
PRG4                  0.028   proteoglycan 4 isoform B 
PRG4                  0.028   proteoglycan 4 isoform A 
ZNF207                0.028   zinc finger protein 207 isoform b 
FMNL2                 0.028   formin-like 2 
BCL9                  0.028   B-cell CLL/lymphoma 9 
MED1                  0.028   mediator complex subunit 1 
AFF1                  0.028   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
ZNF207                0.027   zinc finger protein 207 isoform c 
ZNF207                0.027   zinc finger protein 207 isoform a 
DPCR1                 0.026   diffuse panbronchiolitis critical region 1 protein ...
LOC100294236          0.026   PREDICTED: similar to diffuse panbronchiolitis crit...
RAPH1                 0.026   Ras association and pleckstrin homology domains 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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