Guide to the Human Genome
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Name: PHACTR3 Sequence: fasta or formatted (559aa) NCBI GI: 18087853
Description:

phosphatase and actin regulator 3 isoform 1

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [518aa] phosphatase and actin regulator 3 isoform 2
alt prot [448aa] phosphatase and actin regulator 3 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         43           2
 C cysteine            0.5          3           1
 D aspartate           6.1         34           2
 E glutamate           9.5         53           2
 F phenylalanine       1.3          7           1
 G glycine             4.5         25           2
 H histidine           1.4          8           1
 I isoleucine          2.9         16           2
 K lysine              8.2         46           3
 L leucine            10.0         56           3
 M methionine          1.6          9           2
 N asparagine          3.2         18           1
 P proline             7.5         42           3
 Q glutamine           4.8         27           2
 R arginine            9.3         52           2
 S serine             10.6         59           2
 T threonine           6.1         34           2
 V valine              3.2         18           1
 W tryptophan          0.7          4           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 3 isoform 1 
PHACTR3               0.927   phosphatase and actin regulator 3 isoform 2 
PHACTR3               0.722   phosphatase and actin regulator 3 isoform 3 
PHACTR1               0.319   phosphatase and actin regulator 1 
PHACTR2               0.250   phosphatase and actin regulator 2 isoform 2 
PHACTR2               0.249   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.190   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.190   phosphatase and actin regulator 2 isoform 1 
PHACTR4               0.180   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.180   phosphatase and actin regulator 4 isoform 1 
NEFH                  0.029   neurofilament, heavy polypeptide 200kDa 
ENAH                  0.024   enabled homolog isoform a 
ENAH                  0.024   enabled homolog isoform b 
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
NOLC1                 0.022   nucleolar and coiled-body phosphoprotein 1 
MAP7D1                0.022   MAP7 domain containing 1 
INCENP                0.022   inner centromere protein antigens 135/155kDa isofor...
TRIOBP                0.021   TRIO and F-actin binding protein isoform 6 
MAST4                 0.021   microtubule associated serine/threonine kinase fami...
INCENP                0.021   inner centromere protein antigens 135/155kDa isofor...
LOC100133599          0.021   PREDICTED: hypothetical protein 
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SRRM2                 0.020   splicing coactivator subunit SRm300 
RBM25                 0.020   RNA binding motif protein 25 
TNS1                  0.020   tensin 
KIAA0182              0.020   genetic suppressor element 1 isoform 2 
KIAA0182              0.020   genetic suppressor element 1 isoform 1 
TCHH                  0.019   trichohyalin 
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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