Guide to the Human Genome
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Name: PHACTR2 Sequence: fasta or formatted (554aa) NCBI GI: 154354972
Description:

phosphatase and actin regulator 2 isoform 4

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [645aa] phosphatase and actin regulator 2 isoform 1
alt prot [565aa] phosphatase and actin regulator 2 isoform 2
alt prot [634aa] phosphatase and actin regulator 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         34           2
 C cysteine            0.4          2           1
 D aspartate           6.0         33           2
 E glutamate          11.4         63           4
 F phenylalanine       2.2         12           1
 G glycine             5.8         32           1
 H histidine           1.1          6           1
 I isoleucine          3.2         18           1
 K lysine              8.8         49           3
 L leucine             7.6         42           2
 M methionine          1.1          6           1
 N asparagine          3.2         18           1
 P proline             6.7         37           4
 Q glutamine           3.8         21           2
 R arginine            7.2         40           3
 S serine             10.6         59           2
 T threonine           8.5         47           3
 V valine              4.7         26           2
 W tryptophan          0.7          4           1
 Y tyrosine            0.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.993   phosphatase and actin regulator 2 isoform 2 
PHACTR2               0.872   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.865   phosphatase and actin regulator 2 isoform 1 
PHACTR3               0.251   phosphatase and actin regulator 3 isoform 1 
PHACTR3               0.250   phosphatase and actin regulator 3 isoform 2 
PHACTR4               0.238   phosphatase and actin regulator 4 isoform 2 
PHACTR4               0.238   phosphatase and actin regulator 4 isoform 1 
PHACTR1               0.230   phosphatase and actin regulator 1 
PHACTR3               0.187   phosphatase and actin regulator 3 isoform 3 
TNRC18                0.027   trinucleotide repeat containing 18 
CCDC34                0.026   coiled-coil domain containing 34 isoform 1 
MAP4K4                0.025   mitogen-activated protein kinase kinase kinase kinas...
NOLC1                 0.025   nucleolar and coiled-body phosphoprotein 1 
DPCR1                 0.023   diffuse panbronchiolitis critical region 1 protein ...
BAT2D1                0.023   HBxAg transactivated protein 2 
LOC100294236          0.023   PREDICTED: similar to diffuse panbronchiolitis crit...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
BCL9                  0.021   B-cell CLL/lymphoma 9 
ZC3H13                0.021   zinc finger CCCH-type containing 13 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.020   TRAF2 and NCK interacting kinase isoform 3 
RSL1D1                0.020   ribosomal L1 domain containing 1 
MYO6                  0.020   myosin VI 
RTF1                  0.020   Paf1/RNA polymerase II complex component 
CCDC34                0.020   coiled-coil domain containing 34 isoform 2 
HECTD1                0.019   HECT domain containing 1 
UMODL1                0.019   uromodulin-like 1 isoform 2 precursor 
TNIK                  0.019   TRAF2 and NCK interacting kinase isoform 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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