Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PI4K2B Sequence: fasta or formatted (481aa) NCBI GI: 224591401
Description:

phosphatidylinositol 4-kinase type 2 beta

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         30           2
 C cysteine            1.9          9           2
 D aspartate           6.0         29           2
 E glutamate           8.9         43           4
 F phenylalanine       5.4         26           2
 G glycine             6.9         33           2
 H histidine           1.7          8           1
 I isoleucine          6.0         29           2
 K lysine              7.1         34           2
 L leucine             7.9         38           2
 M methionine          1.2          6           1
 N asparagine          3.3         16           1
 P proline             7.1         34           2
 Q glutamine           4.0         19           1
 R arginine            6.2         30           2
 S serine              7.1         34           3
 T threonine           2.3         11           1
 V valine              5.8         28           2
 W tryptophan          2.1         10           1
 Y tyrosine            2.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol 4-kinase type 2 beta 
PI4K2A                0.553   phosphatidylinositol 4-kinase type 2 alpha 
COL7A1                0.012   alpha 1 type VII collagen precursor 
RUNDC1                0.009   RUN domain containing 1 
BAT2                  0.008   HLA-B associated transcript-2 
GALNT12               0.008   N-acetylgalactosaminyltransferase 12 
MYH4                  0.008   myosin, heavy polypeptide 4, skeletal muscle 
ADIPOQ                0.008   adiponectin precursor 
MERTK                 0.008   MER receptor tyrosine kinase precursor 
MYH8                  0.008   myosin, heavy chain 8, skeletal muscle, perinatal [...
SPNS2                 0.007   spinster homolog 2 
COL11A1               0.007   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.007   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.007   alpha 1 type XI collagen isoform A preproprotein [Ho...
TRIO                  0.007   triple functional domain (PTPRF interacting) 
CD93                  0.007   CD93 antigen precursor 
C19orf57              0.007   hypothetical protein LOC79173 
COL4A1                0.006   alpha 1 type IV collagen preproprotein 
LOC100293409          0.006   PREDICTED: similar to Mucin-19 
LOC728636             0.006   PREDICTED: similar to golgi autoantigen, golgin sub...
COL11A2               0.006   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.006   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.006   collagen, type XI, alpha 2 isoform 1 preproprotein ...
LOC440295             0.006   hypothetical protein LOC440295 
LOC731282             0.006   PREDICTED: hypothetical protein 
LOC100291118          0.006   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.006   PREDICTED: hypothetical protein XP_002343203 
LIMA1                 0.006   LIM domain and actin binding 1 isoform c 
LIMA1                 0.006   LIM domain and actin binding 1 isoform a 
LIMA1                 0.006   LIM domain and actin binding 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press