Guide to the Human Genome
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Name: LOC731282 Sequence: fasta or formatted (320aa) NCBI GI: 169167057
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {265aa} PREDICTED: hypothetical protein
alt prot {265aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         39           3
 C cysteine            2.8          9           2
 D aspartate           2.5          8           1
 E glutamate           2.8          9           1
 F phenylalanine       1.9          6           1
 G glycine             8.8         28           2
 H histidine           2.2          7           1
 I isoleucine          1.2          4           1
 K lysine              2.8          9           1
 L leucine             7.8         25           2
 M methionine          0.3          1           1
 N asparagine          1.6          5           1
 P proline            14.7         47           3
 Q glutamine           1.9          6           1
 R arginine           15.3         49           3
 S serine             10.9         35           2
 T threonine           5.0         16           2
 V valine              3.4         11           2
 W tryptophan          1.9          6           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC731282             0.620   PREDICTED: hypothetical protein 
LOC731282             0.612   PREDICTED: hypothetical protein 
LOC100292934          0.036   PREDICTED: hypothetical protein 
LOC100289949          0.034   PREDICTED: hypothetical protein XP_002346877 
NACA                  0.033   nascent polypeptide-associated complex alpha subuni...
LOC100293604          0.030   PREDICTED: hypothetical protein 
LOC100287837          0.030   PREDICTED: hypothetical protein XP_002343157 
LOC100289408          0.030   PREDICTED: hypothetical protein 
LOC100289408          0.030   PREDICTED: hypothetical protein XP_002344217 
LOC100291634          0.028   PREDICTED: hypothetical protein XP_002346062 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
LOC100287232          0.028   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.028   PREDICTED: hypothetical protein 
KCNH3                 0.028   potassium voltage-gated channel, subfamily H (eag-re...
LOC100128398          0.028   PREDICTED: hypothetical protein 
LOC100128398          0.028   PREDICTED: hypothetical protein 
LOC100128398          0.028   PREDICTED: hypothetical protein 
SRRM1                 0.026   serine/arginine repetitive matrix 1 
LOC100288573          0.026   PREDICTED: hypothetical protein XP_002343799 
C10orf95              0.025   hypothetical protein LOC79946 
WDR81                 0.023   PREDICTED: WD repeat domain 81 
LOC100292234          0.023   PREDICTED: hypothetical protein 
LOC100290708          0.023   PREDICTED: hypothetical protein XP_002346660 
LOC100288955          0.023   PREDICTED: hypothetical protein XP_002342507 
LOC646509             0.023   PREDICTED: hypothetical protein 
MLL2                  0.023   myeloid/lymphoid or mixed-lineage leukemia 2 
SPHK2                 0.023   sphingosine kinase 2 
LOC100286967          0.022   PREDICTED: hypothetical protein XP_002342247 
LOC100130128          0.022   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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