Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MYH8 Sequence: fasta or formatted (1937aa) NCBI GI: 153945790
Description:

myosin, heavy chain 8, skeletal muscle, perinatal

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        168           2
 C cysteine            0.9         17           1
 D aspartate           4.9         95           2
 E glutamate          13.5        262           5
 F phenylalanine       2.8         54           2
 G glycine             3.5         68           2
 H histidine           1.9         37           2
 I isoleucine          4.7         91           2
 K lysine             10.8        210           3
 L leucine            10.4        202           2
 M methionine          2.3         44           2
 N asparagine          4.0         77           1
 P proline             1.6         31           2
 Q glutamine           6.8        132           2
 R arginine            5.2        100           2
 S serine              5.4        105           2
 T threonine           5.1         98           2
 V valine              4.7         92           2
 W tryptophan          0.5         10           1
 Y tyrosine            2.3         44           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin, heavy chain 8, skeletal muscle, perinatal [... 
MYH2                  0.938   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.938   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH1                  0.935   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.921   myosin, heavy polypeptide 4, skeletal muscle 
MYH3                  0.865   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH13                 0.837   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH7                  0.831   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.828   myosin heavy chain 6 
MYH7B                 0.689   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH15                 0.614   myosin, heavy polypeptide 15 
MYH11                 0.379   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.379   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.378   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.378   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH9                  0.372   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.372   myosin, heavy polypeptide 10, non-muscle 
MYH14                 0.343   myosin, heavy chain 14 isoform 2 
MYH14                 0.342   myosin, heavy chain 14 isoform 1 
MYH14                 0.340   myosin, heavy chain 14 isoform 3 
MYO5C                 0.157   myosin VC 
MYO5A                 0.152   myosin VA isoform 1 
MYO5A                 0.152   myosin VA isoform 2 
MYO5B                 0.148   myosin VB 
MYO18A                0.129   myosin 18A isoform a 
MYO18A                0.128   myosin 18A isoform b 
MYO10                 0.126   myosin X 
MYO7A                 0.123   myosin VIIA isoform 2 
MYO7A                 0.123   myosin VIIA isoform 3 
MYO7A                 0.123   myosin VIIA isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press