LIMA1 6815

Name: LIMA1	Sequence: fasta or formatted (600aa)		NCBI GI: 165905591
Description: LIM domain and actin binding 1 isoform c		Referenced in: LIM Domain Proteins
Other entries for this name: alt prot [760aa] LIM domain and actin binding 1 isoform a alt prot [759aa] LIM domain and actin binding 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 36 2 C cysteine 1.3 8 1 D aspartate 4.3 26 2 E glutamate 12.3 74 2 F phenylalanine 2.3 14 1 G glycine 5.2 31 2 H histidine 1.8 11 1 I isoleucine 3.2 19 1 K lysine 9.7 58 2 L leucine 6.2 37 2 M methionine 1.8 11 2 N asparagine 5.3 32 2 P proline 6.3 38 3 Q glutamine 4.8 29 2 R arginine 4.8 29 2 S serine 12.5 75 3 T threonine 4.0 24 2 V valine 5.0 30 2 W tryptophan 1.2 7 1 Y tyrosine 1.8 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM domain and actin binding 1 isoform c LIMA1 1.000 LIM domain and actin binding 1 isoform a LIMA1 0.992 LIM domain and actin binding 1 isoform b XIRP2 0.157 xin actin-binding repeat containing 2 isoform 2 [Ho... LIMD2 0.099 LIM domain containing 2 MICAL3 0.039 microtubule associated monoxygenase, calponin and L... MICAL3 0.034 microtubule associated monoxygenase, calponin and L... MICAL3 0.034 microtubule associated monoxygenase, calponin and L... MICAL2 0.034 microtubule associated monoxygenase, calponin and LIM... MICALL2 0.030 MICAL-like 2 isoform 1 CSRP3 0.025 cysteine and glycine-rich protein 3 CSRP3 0.025 cysteine and glycine-rich protein 3 CSRP1 0.025 cysteine and glycine-rich protein 1 isoform 1 MICALL1 0.024 molecule interacting with Rab13 CSRP2 0.024 cysteine and glycine-rich protein 2 CRIP2 0.023 cysteine-rich protein 2 FBLIM1 0.023 filamin-binding LIM protein-1 isoform b FBLIM1 0.023 filamin-binding LIM protein-1 isoform a LIMS2 0.022 LIM and senescent cell antigen-like domains 2 isofor... MICAL1 0.021 microtubule associated monoxygenase, calponin and L... MICAL1 0.021 microtubule associated monoxygenase, calponin and L... CSRP1 0.021 cysteine and glycine-rich protein 1 isoform 2 [Homo... CRIP3 0.020 cysteine-rich protein 3 LASP1 0.019 LIM and SH3 protein 1 NEBL 0.019 nebulette non-muscle isoform LOC100288695 0.019 PREDICTED: hypothetical protein XP_002342298 LIMS2 0.018 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.018 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.018 LIM and senescent cell antigen-like domains 2 isofo... NRAP 0.018 nebulin-related anchoring protein isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.