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Search of human proteins with 222418619
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222418619 keratin associated protein 7-1 [Homo sapiens]
(87 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222418619 keratin associated protein 7-1 [Homo sapiens] 202 4e-53
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 40 5e-04
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 40 5e-04
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 39 0.001
gi|55956899 keratin 9 [Homo sapiens] 38 0.002
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 38 0.002
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 37 0.003
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b... 36 0.006
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 36 0.007
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 35 0.010
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 35 0.010
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 35 0.013
gi|239747524 PREDICTED: similar to serum response factor-related... 33 0.037
gi|89357932 keratin 5b [Homo sapiens] 33 0.037
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 33 0.037
gi|4505487 occludin [Homo sapiens] 33 0.048
gi|195972866 keratin 10 [Homo sapiens] 33 0.048
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 32 0.082
gi|24430192 keratin 16 [Homo sapiens] 32 0.11
gi|192807292 keratin 24 [Homo sapiens] 32 0.14
gi|153791670 keratin 76 [Homo sapiens] 32 0.14
gi|33946327 nucleoporin 214kDa [Homo sapiens] 32 0.14
gi|109288006 keratin associated protein 13-1 [Homo sapiens] 32 0.14
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 32 0.14
gi|119395754 keratin 5 [Homo sapiens] 31 0.18
gi|131412228 keratin 13 isoform b [Homo sapiens] 31 0.18
gi|131412225 keratin 13 isoform a [Homo sapiens] 31 0.18
>gi|222418619 keratin associated protein 7-1 [Homo sapiens]
Length = 87
Score = 202 bits (515), Expect = 4e-53
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MTRYFCCGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSN 60
MTRYFCCGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSN
Sbjct: 1 MTRYFCCGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSN 60
Query: 61 INNLGGCYGGSFYRPWGSGSGFGYSTY 87
INNLGGCYGGSFYRPWGSGSGFGYSTY
Sbjct: 61 INNLGGCYGGSFYRPWGSGSGFGYSTY 87
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 8 GSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLGGC 67
G Y GY YG +G+ P NYG +G +FGGS N+GG
Sbjct: 281 GGYGGGYDNYGGGNYGSGNYNDFGNYNQ--QPSNYGPMKSG------NFGGSR--NMGGP 330
Query: 68 YGGSFYRPWGSGSGFGY 84
YGG Y P GSG GY
Sbjct: 331 YGGGNYGPGGSGGSGGY 347
Score = 31.2 bits (69), Expect = 0.18
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGS 78
YG G GY + G +GG N GG YG Y +G+
Sbjct: 269 YGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGN 305
Score = 30.8 bits (68), Expect = 0.24
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 8 GSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSL--GYSFGGSNINNLG 65
G++ PG G+NF G GS +G G NGY G +FGGS G
Sbjct: 217 GNFGPGP---GSNFRGGSDG--------YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGG 265
Query: 66 -GCYGGSF--YRPWGSGSGFGYSTY 87
G YGG Y G G G GY Y
Sbjct: 266 RGGYGGGGPGYGNQGGGYGGGYDNY 290
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GSP YG G GY GG N GG YGG + G G G
Sbjct: 258 GSP-GYGGGRGGYGG-----GGPGYGNQGGGYGGGYDNYGGGNYGSG 298
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 39.7 bits (91), Expect = 5e-04
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 8 GSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLGGC 67
G Y GY YG +G+ P NYG +G +FGGS N+GG
Sbjct: 269 GGYGGGYDNYGGGNYGSGNYNDFGNYNQ--QPSNYGPMKSG------NFGGSR--NMGGP 318
Query: 68 YGGSFYRPWGSGSGFGY 84
YGG Y P GSG GY
Sbjct: 319 YGGGNYGPGGSGGSGGY 335
Score = 31.2 bits (69), Expect = 0.18
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGS 78
YG G GY + G +GG N GG YG Y +G+
Sbjct: 257 YGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGN 293
Score = 30.8 bits (68), Expect = 0.24
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 8 GSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSL--GYSFGGSNINNLG 65
G++ PG G+NF G GS +G G NGY G +FGGS G
Sbjct: 205 GNFGPGP---GSNFRGGSDG--------YGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGG 253
Query: 66 -GCYGGSF--YRPWGSGSGFGYSTY 87
G YGG Y G G G GY Y
Sbjct: 254 RGGYGGGGPGYGNQGGGYGGGYDNY 278
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GSP YG G GY GG N GG YGG + G G G
Sbjct: 246 GSP-GYGGGRGGYGG-----GGPGYGNQGGGYGGGYDNYGGGNYGSG 286
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 38.5 bits (88), Expect = 0.001
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 14/88 (15%)
Query: 7 CGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLG- 65
CGSY+ Y G + +G L C G GC GY LG+ +GG + G
Sbjct: 9 CGSYYRNYN--GGHGYGCCGYGGLGCGYG-----GCGYGCCGYGGLGFGYGGLDCGYGGL 61
Query: 66 GCYGGSF----YR--PWGSGSGFGYSTY 87
GC GSF YR G G G+GY ++
Sbjct: 62 GCGYGSFCGCGYRGLDCGYGCGYGYVSH 89
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 44 CGCNGYSSLGYSFGGSN-----INNLGGCYGGSFYRPWGSGSGFGYST 86
CG G S GYS+GG + ++LGG +GG R +G SG GYS+
Sbjct: 61 CGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGG-SRGFGGASGGGYSS 107
Score = 33.1 bits (74), Expect = 0.048
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 43 GCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYS 85
G G SS GY G S + GG GGSF +G GSG G+S
Sbjct: 42 GGGGRFSSSSGYGGGSSRVCGRGG--GGSFGYSYGGGSGGGFS 82
Score = 33.1 bits (74), Expect = 0.048
Identities = 26/70 (37%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 17 YGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSS---LGYSFGGSNINNLGGCYGGSFY 73
YG G F A+ L GS G GYSS G FGG + GG YG F
Sbjct: 73 YGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFG 132
Query: 74 RPWGSGSGFG 83
G G G G
Sbjct: 133 GFGGFGGGAG 142
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS +YG G +G GY G + GG YGG GSG G+G
Sbjct: 492 GSGGSYGGGGSGG---GYGGGSGSRGGSGGSYGGGSGSGGGSGGGYG 535
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS +YG G G S Y GGS GG YGG GSG +G
Sbjct: 480 GSGGSYGRGSRGGSGGSYGGGGS-----GGGYGGGSGSRGGSGGSYG 521
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS YG G G S G GG + GG YGG GSG G+G
Sbjct: 529 GSGGGYGGGSGGGHSGGS--GGGHSGGSGGNYGGGSGSGGGSGGGYG 573
Score = 28.9 bits (63), Expect = 0.91
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 10/49 (20%)
Query: 37 GSPLNYG--CGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS NYG G G S GY G + GG +GG GSGFG
Sbjct: 553 GSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGG--------GSGFG 593
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 45 GCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
G G G S+G + GG YGG GSG G+G
Sbjct: 474 GLGGRGGSGGSYGRGSRGGSGGSYGGG-----GSGGGYG 507
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGSNINN--LGGCYGGSFYRPWGSGSGFGYS 85
GS YG G G S+GG + + GG YGG GSG G+S
Sbjct: 501 GSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHS 551
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 37 GSPLNYGCGCNGYSSLGYS--FGGSNINNLGGCYGGSFYRPWGSGSGFG 83
G G G G S GY GG + GG + G +G GSG G
Sbjct: 517 GGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSG 565
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 37.7 bits (86), Expect = 0.002
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 7 CGSYFPGYPI-YGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLG 65
CG Y GY YG+++ G T +C G YGCG GY G S
Sbjct: 18 CG-YGSGYGYGYGSSY-GCGYGTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYS------ 69
Query: 66 GC-YGGSFYRPWGSGSGFGYST 86
C YG + +GSGSG GY T
Sbjct: 70 -CGYGSGYSCGYGSGSGCGYGT 90
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 41 NYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYST 86
+YGCG S GY +G S G Y + +GSG G GY +
Sbjct: 15 SYGCGYG--SGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGS 58
Score = 29.3 bits (64), Expect = 0.70
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 2 TRYFC---CGSYFPGYPI-YGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFG 57
T Y C CG Y GY YG+++ G T +C G Y CG S GY
Sbjct: 38 TGYSCGYGCG-YGSGYGCGYGSSY-GCGYGTGYSC----GYGSGYSCGYGSGSGCGY--- 88
Query: 58 GSNINNLGGC-YGGSFYRPWGSGSGF-GYSTY 87
G+ GC YG + GSGSG+ GY +
Sbjct: 89 GTGFGCGYGCGYGTGYGCGCGSGSGYCGYRPF 120
Score = 27.3 bits (59), Expect = 2.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYST 86
YG C SS G +G G YG + + G G GY +
Sbjct: 6 YGNSCGYGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYGS 50
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 37.0 bits (84), Expect = 0.003
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 29/83 (34%)
Query: 7 CGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGG-----SNI 61
CGSY+ Y YG ++G GC GY LGY +G S+
Sbjct: 2 CGSYYGNY--YG----------------------DHGYGCCGYEGLGYGYGSLRCGYSSC 37
Query: 62 NNLGGCYGGSFYRPWGSGSGFGY 84
G YG F+ G G G GY
Sbjct: 38 CGYGHGYGSRFFCGCGYGCGSGY 60
>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
[Homo sapiens]
Length = 372
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 37 GSPLNYGCGCNGYS--SLGYSFGGSNINNLGGCYGGS-FYRPWGSGSGFGY 84
G+ YG G GYS S GY GG N G YGGS Y + +G G G+
Sbjct: 248 GNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGF 298
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 35.8 bits (81), Expect = 0.007
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 37 GSPLNYGCGCNGY--SSLGYSFGGSNINNLGGCYG-GSFYRPWGSGSGFG 83
G YGCGC + G +GG + G YG GS + +G GSGFG
Sbjct: 20 GLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFG 69
Score = 34.7 bits (78), Expect = 0.017
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 43 GCGCNGYSSLGYSFG---GSNINNLGGC-YG----GSFYRPWGSGSGFG 83
G C G+ LGY +G GS GC YG GS + +G GSGFG
Sbjct: 12 GYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 32 CVVPLGSPLNYGC--GCNGYSSLGYSFGGSNINNLGGC-YGGSFYRPWGSGSGFGYST 86
C G+ YGC GC S G +G S GC YG + +GSGSG GY T
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSY-----GCGYGTGYSCGYGSGSGCGYGT 54
Score = 29.3 bits (64), Expect = 0.70
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 20 NFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGS-NINNLGGCYGGSFYRPWGS 78
N++G + C G YGCG GY G S + GC G+ Y G
Sbjct: 4 NYYGN--SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGY---GC 58
Query: 79 GSGFGYST 86
G G GY T
Sbjct: 59 GYGCGYGT 66
Score = 28.1 bits (61), Expect = 1.6
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 7 CGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFG-GSNINNLG 65
C +Y+ YG ++ G + C G +YGCG S GY G G
Sbjct: 2 CCNYYGNSCGYGCSY-GCGYGSGYGC----GYGSSYGCGYGTGYSCGYGSGSGCGYGTGY 56
Query: 66 GC-----YGGSFYRPWGSGSGF-GYSTY 87
GC YG + GSGSG+ GY +
Sbjct: 57 GCGYGCGYGTGYGCGCGSGSGYCGYRPF 84
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 32 CVVPLGSPLNYGC--GCNGYSSLGYSFGGSNINNLGGC-YGGSFYRPWGSGSGFGYST 86
C G+ YGC GC S G +G S GC YG + +GSGSG GY T
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSY-----GCGYGTGYSCGYGSGSGCGYGT 54
Score = 29.3 bits (64), Expect = 0.70
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 20 NFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGS-NINNLGGCYGGSFYRPWGS 78
N++G + C G YGCG GY G S + GC G+ Y G
Sbjct: 4 NYYGN--SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGY---GC 58
Query: 79 GSGFGYST 86
G G GY T
Sbjct: 59 GYGCGYGT 66
Score = 28.1 bits (61), Expect = 1.6
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 12/88 (13%)
Query: 7 CGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFG-GSNINNLG 65
C +Y+ YG ++ G + C G +YGCG S GY G G
Sbjct: 2 CCNYYGNSCGYGCSY-GCGYGSGYGC----GYGSSYGCGYGTGYSCGYGSGSGCGYGTGY 56
Query: 66 GC-----YGGSFYRPWGSGSGF-GYSTY 87
GC YG + GSGSG+ GY +
Sbjct: 57 GCGYGCGYGTGYGCGCGSGSGYCGYRPF 84
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 35.4 bits (80), Expect = 0.010
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 15/42 (35%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
YGCGC + LGY GG YGG +G GSGFG
Sbjct: 25 YGCGCGSFRRLGY----------GGGYGG-----YGYGSGFG 51
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 35.4 bits (80), Expect = 0.010
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 40 LNYGCGCNGYSSLGYSFGGSNINNLG-GC-YG----GSFYRPWGSGSGFG 83
L YGCG G GY G + LG GC YG GS + +G GSGFG
Sbjct: 11 LGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
Score = 34.7 bits (78), Expect = 0.017
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 37 GSPLNYGCGCN---------GYSSLGY--SFGGSNINNLGGCYGGSFYRPWGSGSGFGYS 85
G YGCGC GY GY FGG + G YG YRP G G+G+S
Sbjct: 20 GLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYG-GYGFS 78
Query: 86 TY 87
+
Sbjct: 79 GF 80
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 37 GSPLNYGC--GCNGYSSLGYSFGGSNINNLGGC-YGGSFYRPWGSGSGFGYST 86
G+ YGC GC S G +G S GC YG + +GSGSG GY T
Sbjct: 37 GNSCGYGCSYGCGYGSGYGCGYGSSY-----GCGYGTGYSCGYGSGSGCGYGT 84
Score = 29.6 bits (65), Expect = 0.53
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 11 FPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGS-NINNLGGCYG 69
+P P+ N++G + C G YGCG GY G S + GC
Sbjct: 26 YPPKPV-PCNYYGN--SCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGY 82
Query: 70 GSFYRPWGSGSGFGYST 86
G+ Y G G G GY T
Sbjct: 83 GTGY---GCGYGCGYGT 96
Score = 27.3 bits (59), Expect = 2.6
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 41 NYGCGCNGYSSLGYSFG-GSNINNLGGC-----YGGSFYRPWGSGSGF-GYSTY 87
+YGCG S GY G G GC YG + GSGSG+ GY +
Sbjct: 61 SYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGYRPF 114
Score = 25.8 bits (55), Expect = 7.7
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 19/82 (23%)
Query: 7 CGSYFPGYPI-YGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLG 65
CG Y GY YG+++ G T +C GS YG G GY G
Sbjct: 48 CG-YGSGYGCGYGSSY-GCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTG-------Y 98
Query: 66 GCYGGSFYRPWGSGSGFGYSTY 87
GC G GSG GY Y
Sbjct: 99 GC---------GCGSGSGYCGY 111
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 35.0 bits (79), Expect = 0.013
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 41 NYGCGCNGYSSLG-YSFGGSNINNLGGCY-GGSFYRPWGSGSGFGYSTY 87
NYG G GYSS G Y GG N GG Y GG Y + G FG Y
Sbjct: 276 NYGGG-PGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNY 323
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 42 YGCGCNGYSSLGYSFGGS---NINNLGGCYGGSFYRPWGSGSGFG 83
YG G GY + G +GG + N GG +GG Y G+ + FG
Sbjct: 289 YGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFG 333
>gi|239747524 PREDICTED: similar to serum response factor-related
protein C4 [Homo sapiens]
Length = 434
Score = 33.5 bits (75), Expect = 0.037
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 37 GSPLNYGCGCNGYSSLGYSFGGS---NINNLGGCYGGSFYRPWGSGSGFGYS 85
G YG GY S G +GGS N N GG GGSF GSGS FG S
Sbjct: 69 GGSRGYGSVGQGYGSQGSGYGGSGSYNSYNNGG--GGSF--GGGSGSSFGGS 116
>gi|89357932 keratin 5b [Homo sapiens]
Length = 520
Score = 33.5 bits (75), Expect = 0.037
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 48 GYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
G+SS G F ++N+ GGC GS WGSG G
Sbjct: 29 GFSSRG-GFSSRSLNSFGGCLEGSRGSTWGSGGRLG 63
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 33.5 bits (75), Expect = 0.037
Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 28/80 (35%)
Query: 7 CGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLGG 66
CGSY+ Y YGT G G GY LGY +GG G
Sbjct: 2 CGSYYGNY--YGTP----------------------GYGFCGYGGLGYGYGGLGC-GYGS 36
Query: 67 CYGGSFYRPWGSGSGFGYST 86
C G F R G G+GY +
Sbjct: 37 CCGCGFRR---LGCGYGYGS 53
>gi|4505487 occludin [Homo sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYSTY 87
YG G S+GY +GGS + G YG +G G G+GY Y
Sbjct: 93 YGTSLLG-GSVGYPYGGSGFGSYGSGYG------YGYGYGYGYGGY 131
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 33.1 bits (74), Expect = 0.048
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
YG G +G S G GG + + GG YGG SG G+G
Sbjct: 473 YGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYG 514
Score = 31.2 bits (69), Expect = 0.18
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 6 CCGSYFPGYPIYGTNFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLG 65
C G GY G G+FR + GS ++G G G S G SFGG + G
Sbjct: 66 CFGGSSGGYGGLGGFGGGSFRGS-------YGSS-SFG-GSYGGSFGGGSFGGGSFG--G 114
Query: 66 GCYGGSFYRPWGSGSGFG 83
G +GG + G G GFG
Sbjct: 115 GSFGGGGFGGGGFGGGFG 132
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 42 YGCGCNGYSSLGYSFGGS-----NINNLGGCYGGSFYRPWGSGSGFGYSTY 87
+G GY LG GGS ++ GG YGGSF G FG ++
Sbjct: 67 FGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSF 117
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 41 NYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYST 86
++G G G SS G S GG + GG +GGS +G GS G S+
Sbjct: 468 SFGGGYGGGSSGGGSSGGGH----GGGHGGSSGGGYGGGSSGGGSS 509
Score = 27.7 bits (60), Expect = 2.0
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 48 GYSSLGYSFGG-SNINNLGGCYGGSFYRPWGSGSGFGYSTY 87
G+SS G+S G S ++ GGC+GGS +G GFG ++
Sbjct: 46 GFSSGGFSGGSFSRGSSGGGCFGGS-SGGYGGLGGFGGGSF 85
Score = 27.3 bits (59), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
YG G +G S G +GG + + G +GGS +G GS G
Sbjct: 499 YGGGSSGGGSSGGGYGGGSSS---GGHGGSSSGGYGGGSSGG 537
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSG 81
+G G G S GY G S + GG YGG GS SG
Sbjct: 487 HGGGHGGSSGGGYGGGSSGGGSSGGGYGG------GSSSG 520
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 45 GCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
G +G SS G GGS+ GG GGS SG G+G
Sbjct: 520 GGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYG 558
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 32.3 bits (72), Expect = 0.082
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 12/48 (25%)
Query: 40 LNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGYSTY 87
L YGCG G+ LGY + GC GSF R G G GFG + Y
Sbjct: 11 LGYGCG--GFGGLGYGY---------GCGCGSF-RRLGYGCGFGGNGY 46
Score = 32.3 bits (72), Expect = 0.082
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 37 GSPLNYGCGCNGYSSLGY--SFGGSNINNL-GGCYGG 70
G YGCGC + LGY FGG+ CYGG
Sbjct: 20 GLGYGYGCGCGSFRRLGYGCGFGGNGYGYCRPSCYGG 56
>gi|24430192 keratin 16 [Homo sapiens]
Length = 473
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
YG G + SS G FGG LG +GG G G+GFG
Sbjct: 68 YGGGFSSSSSFGSGFGGGYGGGLGAGFGG------GLGAGFG 103
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 38 SPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
+P YG G S+ F LGG YGG F GSGFG
Sbjct: 42 APSTYGGGL----SVSSRFSSGGACGLGGGYGGGFSSSSSFGSGFG 83
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 44 CGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGY 84
CG G G+S S + GG YGG +G G G G+
Sbjct: 62 CGLGGGYGGGFSSSSSFGSGFGGGYGGGLGAGFGGGLGAGF 102
>gi|192807292 keratin 24 [Homo sapiens]
Length = 525
Score = 31.6 bits (70), Expect = 0.14
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 37 GSPLNYG--CGCNGYSSLGYSFGGSNINNLG---GCYGGSFYRPWGS---GSGFG 83
GS + G CG G S+ G+ G S+ + G G +GGSF +GS G GFG
Sbjct: 24 GSSFSSGSRCGLGGSSAQGFRGGASSCSLSGGSSGAFGGSFGGGFGSCSVGGGFG 78
Score = 26.6 bits (57), Expect = 4.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 25 FRATPLNCVVPLGSPLNYGC---GCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSG 81
FR +C + GS +G G G S+G FGG++ + G G SF G G G
Sbjct: 43 FRGGASSCSLSGGSSGAFGGSFGGGFGSCSVGGGFGGASGSGTGFGGGSSFGGVSGFGRG 102
Query: 82 FGY 84
G+
Sbjct: 103 SGF 105
>gi|153791670 keratin 76 [Homo sapiens]
Length = 638
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/50 (46%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 34 VPLGSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
V GS G G G SS G F G GG YGG F G GSGFG
Sbjct: 71 VAAGSSRAGGFG-GGRSSCG--FAGGYGGGFGGSYGGGFGGGRGVGSGFG 117
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 31.6 bits (70), Expect = 0.14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
+G + SS +SFG S+ N GG +G S +G GFG
Sbjct: 1772 FGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFG 1813
>gi|109288006 keratin associated protein 13-1 [Homo sapiens]
Length = 172
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 43 GCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRP 75
GCG +G+ SLGY GG +LG YG F RP
Sbjct: 121 GCGSSGFRSLGY--GGCGFPSLG--YGVGFCRP 149
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 20 NFHGTFRATPLNCVVPLGSPLNYGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSG 79
N++G C GS GCGC + G +G ++ G YG + +GSG
Sbjct: 4 NYYGNSCGYGSGCGCGYGS--GSGCGCGYGTGYGCGYGCGFGSHYGCGYGTGYGCGYGSG 61
Query: 80 SGF-GYSTY 87
SG+ GY +
Sbjct: 62 SGYCGYRPF 70
>gi|119395754 keratin 5 [Homo sapiens]
Length = 590
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
Query: 44 CGCNGYSSLG-YSFGGS---NINNLGGCY--------GGSFYRPWGSGSGFGY 84
CG GY S Y+ GGS +I+ GG + GG + G+GSGFG+
Sbjct: 55 CGVGGYGSRSLYNLGGSKRISISTSGGSFRNRFGAGAGGGYGFGGGAGSGFGF 107
Score = 27.7 bits (60), Expect = 2.0
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 29 PLNCVVPLGSPLN-YGCGCNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
P+N V S + YG G LG GG L G GS+Y G G G
Sbjct: 488 PVNISVVTSSVSSGYGSGSGYGGGLGGGLGGGLGGGLAGGSSGSYYSSSSGGVGLG 543
Score = 26.9 bits (58), Expect = 3.5
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Query: 42 YGCGCNGYSSLGYSFGGSNINNLG--GCYGGSFYRPWGSGSGFG 83
+G G G GY FGG + G G GG F G G+GFG
Sbjct: 87 FGAGAGG----GYGFGGGAGSGFGFGGGAGGGF--GLGGGAGFG 124
>gi|131412228 keratin 13 isoform b [Homo sapiens]
Length = 420
Score = 31.2 bits (69), Expect = 0.18
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 37 GSPLNYGCG--CNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS YG G C G FGG LGG YGG G G GFG
Sbjct: 40 GSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG------GLGGGFG 82
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 43 GCGCNGYSS-LGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGY 84
G GY + FGG + GG YGG +G G G G+
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGF 81
>gi|131412225 keratin 13 isoform a [Homo sapiens]
Length = 458
Score = 31.2 bits (69), Expect = 0.18
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 8/49 (16%)
Query: 37 GSPLNYGCG--CNGYSSLGYSFGGSNINNLGGCYGGSFYRPWGSGSGFG 83
GS YG G C G FGG LGG YGG G G GFG
Sbjct: 40 GSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGG------GLGGGFG 82
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 43 GCGCNGYSS-LGYSFGGSNINNLGGCYGGSFYRPWGSGSGFGY 84
G GY + FGG + GG YGG +G G G G+
Sbjct: 39 GGSAGGYGGGVSCGFGGGAGSGFGGGYGGGLGGGYGGGLGGGF 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.148 0.530
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,471,079
Number of Sequences: 37866
Number of extensions: 222738
Number of successful extensions: 794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 477
Number of HSP's gapped (non-prelim): 261
length of query: 87
length of database: 18,247,518
effective HSP length: 59
effective length of query: 28
effective length of database: 16,013,424
effective search space: 448375872
effective search space used: 448375872
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.