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Search of human proteins with 22095335
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens] 563 e-161
gi|89353783 coagulation factor II (thrombin) receptor-like 3 pre... 35 0.069
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 32 0.58
gi|21361320 TRK-fused [Homo sapiens] 31 1.00
gi|56090139 TRK-fused [Homo sapiens] 31 1.00
gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens] 31 1.3
gi|157785645 SPEG complex locus [Homo sapiens] 31 1.3
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 31 1.3
gi|157042792 coiled-coil domain containing 64B [Homo sapiens] 30 1.7
gi|116292174 fidgetin-like 2 [Homo sapiens] 30 2.9
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 30 2.9
gi|239756453 PREDICTED: hypothetical protein XP_002344992 [Homo ... 29 3.8
gi|19923279 semaphorin W [Homo sapiens] 29 3.8
gi|93204865 hypothetical protein LOC57724 [Homo sapiens] 29 3.8
gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo... 29 4.9
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s... 29 4.9
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s... 29 4.9
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s... 29 4.9
gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo s... 29 4.9
gi|24475871 G protein-coupled receptor 114 [Homo sapiens] 29 4.9
gi|83367077 mucin 16 [Homo sapiens] 28 6.5
gi|148298722 zinc finger protein 185 [Homo sapiens] 28 6.5
gi|21686977 cell adhesion molecule 4 [Homo sapiens] 28 6.5
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 28 8.4
gi|27437045 colony stimulating factor 3 receptor isoform d precu... 28 8.4
gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens] 28 8.4
gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens] 28 8.4
gi|24496783 colony stimulating factor 3 receptor isoform c precu... 28 8.4
gi|27437042 colony stimulating factor 3 receptor isoform b precu... 28 8.4
gi|4503081 colony stimulating factor 3 receptor isoform a precur... 28 8.4
>gi|22095335 NFAT activation molecule 1 precursor [Homo sapiens]
Length = 270
Score = 563 bits (1450), Expect = e-161
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MENQPVRWRALPGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTA 60
MENQPVRWRALPGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTA
Sbjct: 1 MENQPVRWRALPGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTA 60
Query: 61 ISFSCRITYPYTPQFKVFTVSYFHEDLQGQRSPKKPTNCHPGLGTENQSHTLDCQVTLVL 120
ISFSCRITYPYTPQFKVFTVSYFHEDLQGQRSPKKPTNCHPGLGTENQSHTLDCQVTLVL
Sbjct: 61 ISFSCRITYPYTPQFKVFTVSYFHEDLQGQRSPKKPTNCHPGLGTENQSHTLDCQVTLVL 120
Query: 121 PGASATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVG 180
PGASATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVG
Sbjct: 121 PGASATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVG 180
Query: 181 TALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGS 240
TALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGS
Sbjct: 181 TALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGS 240
Query: 241 SPTAKQSPLSQERPHRFEDDGELNLVYENL 270
SPTAKQSPLSQERPHRFEDDGELNLVYENL
Sbjct: 241 SPTAKQSPLSQERPHRFEDDGELNLVYENL 270
>gi|89353783 coagulation factor II (thrombin) receptor-like 3
precursor [Homo sapiens]
Length = 385
Score = 35.0 bits (79), Expect = 0.069
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 5 PVRWRALPGLPRPPGLPAAPWLLLGVLLLPGTL-----RLAGGQSV-THTGLPIMASLAN 58
P+R RAL G GL A WL+ L LP TL RLA V H LP+ A ++
Sbjct: 181 PLRARALRGRRLALGLCMAAWLMAAALALPLTLQRQTFRLARSDRVLCHDALPLDAQASH 240
Query: 59 TAISFSC 65
+F+C
Sbjct: 241 WQPAFTC 247
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
sapiens]
Length = 2365
Score = 32.0 bits (71), Expect = 0.58
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 186 WNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENED--GSSP 242
WN R P + + + +PR++S+ + +P S T +RE C++ +D SSP
Sbjct: 337 WNTPRASSPSR--STQLDNPRTSSTQQDNPQTSFPTCTPQRENPRTPCVQQDDPRASSP 393
>gi|21361320 TRK-fused [Homo sapiens]
Length = 400
Score = 31.2 bits (69), Expect = 1.00
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 150 RDAGY-----REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPD 204
+ AGY + PPQ PQ+ +G S G ++ +G G+ PT + P
Sbjct: 249 QQAGYGAQQPQAPPQQPQQ---YGIQYSASYSQQTGPQ----QPQQFQGYGQQPTSQAPA 301
Query: 205 PRSASSPKQHPSE------------SVYTALQRRETEVYACIENEDGSSPTAKQSPLSQE 252
P + P+Q P++ YTA + T ++ G +P+ Q Q
Sbjct: 302 PAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS--QPGAYQP 359
Query: 253 RP 254
RP
Sbjct: 360 RP 361
>gi|56090139 TRK-fused [Homo sapiens]
Length = 400
Score = 31.2 bits (69), Expect = 1.00
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 26/122 (21%)
Query: 150 RDAGY-----REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPD 204
+ AGY + PPQ PQ+ +G S G ++ +G G+ PT + P
Sbjct: 249 QQAGYGAQQPQAPPQQPQQ---YGIQYSASYSQQTGPQ----QPQQFQGYGQQPTSQAPA 301
Query: 205 PRSASSPKQHPSE------------SVYTALQRRETEVYACIENEDGSSPTAKQSPLSQE 252
P + P+Q P++ YTA + T ++ G +P+ Q Q
Sbjct: 302 PAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS--QPGAYQP 359
Query: 253 RP 254
RP
Sbjct: 360 RP 361
>gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens]
Length = 798
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 36 TLRLAGGQSVTHTGLPIMASLANTAISFSCRITYPYTPQFKVFTVSYFHEDLQGQR-SPK 94
T LAG ++ TH G+P+ + +++ + P P K F V F E L+ Q+ P
Sbjct: 206 TTALAGLEAHTHIGVPVNSRVSSKIQQLLNTLKRPKRPPLKEFFVDDFEELLEVQQPDPN 265
Query: 95 KP 96
+P
Sbjct: 266 QP 267
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 30.8 bits (68), Expect = 1.3
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 21/112 (18%)
Query: 156 EPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQHP 215
EPP P K+ + + V+S PG P R P P + +Q P
Sbjct: 2919 EPPPEPTKVTVQSLSPAKEVVS---------------SPGSSP-RSSPRPEGTTL-RQGP 2961
Query: 216 SESVYTALQRRETE----VYACIENEDGSSPTAKQSPLSQERPHRFEDDGEL 263
+ YT L+ + V AC EN G + AK P + E R + E+
Sbjct: 2962 PQKPYTFLEEKARGRFGVVRACRENATGRTFVAKIVPYAAEGKRRVLQEYEV 3013
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 186 WNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGSSPTAK 245
W +KR GP + PR+ SSP HP E V + Q + + ++E+ ++
Sbjct: 872 WMRKRENGPSITQEK---GPRTNSSPG-HPGEVVLSPKQGQPLHIRVTPDHENSTATLEI 927
Query: 246 QSPLSQE 252
SP S+E
Sbjct: 928 TSPTSEE 934
>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
Length = 508
Score = 30.4 bits (67), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 194 PGKDPTRKCPDPRSASSPKQHPSESVYTALQRR 226
PG PT + P R ASSP+ P E + ++R
Sbjct: 315 PGDTPTTRSPKTRKASSPQPSPPEEILEPPKKR 347
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 29.6 bits (65), Expect = 2.9
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 8 WRALPG---LPRPPGLPAAPWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTAIS 62
+ A PG LP PPG P AP+L G LP L T G P A A + +S
Sbjct: 210 YAAQPGYGALPPPPGPPPAPYLTPG---LPAPTPLPAPAPPTAYGFPTAAPGAESGLS 264
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 29.6 bits (65), Expect = 2.9
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 186 WNKKRMRGPGKDPTRKCPDPRSASSPK---QHPSESVYTALQRRETEVYACIENEDGSSP 242
++ +R R + P R+ P PRS S + + S+ + R + ++ +E+ S
Sbjct: 118 YSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESSKRKSA 177
Query: 243 TAKQSPLSQERPHRFEDDGE 262
K+S RP + D +
Sbjct: 178 KEKKSSSKDSRPSQAAGDNQ 197
>gi|239756453 PREDICTED: hypothetical protein XP_002344992 [Homo
sapiens]
Length = 474
Score = 29.3 bits (64), Expect = 3.8
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 187 NKKRMRGPGKDPTRKCPDPRSASSPKQHPSE 217
+++R RGPG+ R+ PDP ++S P+ P E
Sbjct: 444 SERRPRGPGR---RRHPDPGTSSQPRPAPRE 471
>gi|19923279 semaphorin W [Homo sapiens]
Length = 770
Score = 29.3 bits (64), Expect = 3.8
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 15 PRP-PGLPAA---PWLLLGVLLLPGTLRLAGGQSVTHTGLPIMASLANTAISFSCRITYP 70
PRP PG P A P LLL VL P + R+ +SV T LPI + A S R P
Sbjct: 8 PRPGPGQPTASPFPLLLLAVLSGPVSGRVP--RSVPRTSLPI-----SEADSCLTRFAVP 60
Query: 71 YTPQFKVFTV 80
+T + V V
Sbjct: 61 HTYNYSVLLV 70
>gi|93204865 hypothetical protein LOC57724 [Homo sapiens]
Length = 2579
Score = 29.3 bits (64), Expect = 3.8
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 207 SASSPKQHPSESVYTALQ--RRETEVYACIENEDGSSPTAKQSPLSQERP 254
SA +PK HP ++V T ++ + TEV + + G S +A QS S +P
Sbjct: 116 SAVTPKVHPGDNVGTKVETPKNFTEVEENMSVQGGLSESAPQSNFSYTQP 165
>gi|59889578 dehydrogenase/reductase (SDR family) member 10 [Homo
sapiens]
Length = 270
Score = 28.9 bits (63), Expect = 4.9
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 139 TVRGSGTF-ILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVGTALL 184
T+R G +V +AG+ PPQ P++ GF LL L+++GT L
Sbjct: 76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLE-LNLLGTYTL 121
>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
sapiens]
Length = 1424
Score = 28.9 bits (63), Expect = 4.9
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 12 PGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQ----SVTHTGLP 51
P +P PPGLP P L GV +PG AG + S +TGLP
Sbjct: 480 PYIPGPPGLPGLPG-LHGVKGIPGRQGAAGLKGSPGSPGNTGLP 522
>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
sapiens]
Length = 1494
Score = 28.9 bits (63), Expect = 4.9
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 12 PGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQ----SVTHTGLP 51
P +P PPGLP P L GV +PG AG + S +TGLP
Sbjct: 480 PYIPGPPGLPGLPG-LHGVKGIPGRQGAAGLKGSPGSPGNTGLP 522
>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
sapiens]
Length = 1637
Score = 28.9 bits (63), Expect = 4.9
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 12 PGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQ----SVTHTGLP 51
P +P PPGLP P L GV +PG AG + S +TGLP
Sbjct: 480 PYIPGPPGLPGLPG-LHGVKGIPGRQGAAGLKGSPGSPGNTGLP 522
>gi|89142730 alpha 3 type IV collagen isoform 1 precursor [Homo
sapiens]
Length = 1670
Score = 28.9 bits (63), Expect = 4.9
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 12 PGLPRPPGLPAAPWLLLGVLLLPGTLRLAGGQ----SVTHTGLP 51
P +P PPGLP P L GV +PG AG + S +TGLP
Sbjct: 480 PYIPGPPGLPGLPG-LHGVKGIPGRQGAAGLKGSPGSPGNTGLP 522
>gi|24475871 G protein-coupled receptor 114 [Homo sapiens]
Length = 528
Score = 28.9 bits (63), Expect = 4.9
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 164 LLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPT-RKCPD 204
+L+ G+ GL S+ ++V A LW +R+R P+ R C D
Sbjct: 414 VLVMGYGGLTSLFNLVVLAWALWTLRRLRERADAPSVRACHD 455
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 28.5 bits (62), Expect = 6.5
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 198 PTRKCPDPRSASSPKQHPSE-----SVYTALQRRETEVYACIENEDGSSPTAKQSPLSQE 252
P P P S++SP+ PS ++ T++ T+V E +S S ++ E
Sbjct: 5342 PAMTSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVTSSPPNLSSITHE 5401
Query: 253 RPHRFED 259
RP ++D
Sbjct: 5402 RPATYKD 5408
>gi|148298722 zinc finger protein 185 [Homo sapiens]
Length = 689
Score = 28.5 bits (62), Expect = 6.5
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 192 RGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQ 251
RG DP P S+P++ S S L RRE+ + + + +G K Q
Sbjct: 429 RGGQGDPAVPAQQPADPSTPERQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKVGEAWQ 488
Query: 252 ERP 254
+RP
Sbjct: 489 DRP 491
>gi|21686977 cell adhesion molecule 4 [Homo sapiens]
Length = 388
Score = 28.5 bits (62), Expect = 6.5
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 117 TLVLPG--ASATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLS 174
TL LPG ++ GTY C H R ++ E S ++ G LL
Sbjct: 275 TLTLPGLVSADNGTYTCEASNKHGHARALYVLVVYDPGAVVEAQTSVPYAIVGGILALLV 334
Query: 175 VLSVVGTALLLWNKKRMRG 193
L + ++W R +G
Sbjct: 335 FLIICVLVGMVWCSVRQKG 353
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 28.1 bits (61), Expect = 8.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 12 PGLPRPPGLPAAPWLLLGVLLLPG 35
PG P PPG P P +L + LPG
Sbjct: 1095 PGPPGPPGPPGPPAILGAAVALPG 1118
>gi|27437045 colony stimulating factor 3 receptor isoform d
precursor [Homo sapiens]
Length = 783
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 25 WLLLGVLLLPGTLRLAGGQSVT----HTGLPIMAS 55
W L +LLLPG+L G SV+ H G PI AS
Sbjct: 11 WAALIILLLPGSLEECGHISVSAPIVHLGDPITAS 45
>gi|8393264 delta-like 3 protein isoform 1 precursor [Homo sapiens]
Length = 618
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 158 PQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKD 197
P PQ+ LL GLL V G ALLL + +R RG +D
Sbjct: 485 PGDPQRYLLPPALGLLVAAGVAGAALLLVHVRR-RGHSQD 523
>gi|45243561 delta-like 3 protein isoform 2 precursor [Homo sapiens]
Length = 587
Score = 28.1 bits (61), Expect = 8.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 158 PQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKD 197
P PQ+ LL GLL V G ALLL + +R RG +D
Sbjct: 485 PGDPQRYLLPPALGLLVAAGVAGAALLLVHVRR-RGHSQD 523
>gi|24496783 colony stimulating factor 3 receptor isoform c
precursor [Homo sapiens]
Length = 863
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 25 WLLLGVLLLPGTLRLAGGQSVT----HTGLPIMAS 55
W L +LLLPG+L G SV+ H G PI AS
Sbjct: 11 WAALIILLLPGSLEECGHISVSAPIVHLGDPITAS 45
>gi|27437042 colony stimulating factor 3 receptor isoform b
precursor [Homo sapiens]
Length = 769
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 25 WLLLGVLLLPGTLRLAGGQSVT----HTGLPIMAS 55
W L +LLLPG+L G SV+ H G PI AS
Sbjct: 11 WAALIILLLPGSLEECGHISVSAPIVHLGDPITAS 45
>gi|4503081 colony stimulating factor 3 receptor isoform a
precursor [Homo sapiens]
Length = 836
Score = 28.1 bits (61), Expect = 8.4
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 25 WLLLGVLLLPGTLRLAGGQSVT----HTGLPIMAS 55
W L +LLLPG+L G SV+ H G PI AS
Sbjct: 11 WAALIILLLPGSLEECGHISVSAPIVHLGDPITAS 45
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,269,424
Number of Sequences: 37866
Number of extensions: 685465
Number of successful extensions: 3237
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 3166
Number of HSP's gapped (non-prelim): 113
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.