Guide to the Human Genome
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Name: CSF3R Sequence: fasta or formatted (836aa) NCBI GI: 4503081
Description:

colony stimulating factor 3 receptor isoform a precursor

Referenced in:

Interleukins and Their Receptors
Neutrophils, Eosinophils, and Basophils
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [863aa] colony stimulating factor 3 receptor isoform c precursor
alt prot [769aa] colony stimulating factor 3 receptor isoform b precursor
alt prot [783aa] colony stimulating factor 3 receptor isoform d precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         51           2
 C cysteine            3.2         27           2
 D aspartate           2.9         24           2
 E glutamate           5.6         47           2
 F phenylalanine       2.0         17           1
 G glycine             7.2         60           2
 H histidine           3.3         28           1
 I isoleucine          4.1         34           2
 K lysine              2.3         19           2
 L leucine            13.6        114           5
 M methionine          1.8         15           1
 N asparagine          3.2         27           1
 P proline            10.2         85           2
 Q glutamine           6.1         51           2
 R arginine            3.8         32           1
 S serine              8.4         70           2
 T threonine           6.6         55           2
 V valine              4.2         35           2
 W tryptophan          3.3         28           2
 Y tyrosine            2.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 3 receptor isoform a precur... 
CSF3R                 0.991   colony stimulating factor 3 receptor isoform c precu...
CSF3R                 0.896   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.742   colony stimulating factor 3 receptor isoform b precu...
IL6ST                 0.129   interleukin 6 signal transducer isoform 1 precursor ...
IL31RA                0.087   gp130-like monocyte receptor 
IL12RB2               0.076   interleukin 12 receptor, beta 2 precursor 
IL6ST                 0.057   interleukin 6 signal transducer isoform 2 precursor ...
LIFR                  0.044   leukemia inhibitory factor receptor precursor 
LIFR                  0.044   leukemia inhibitory factor receptor precursor [Homo...
OSMR                  0.039   oncostatin M receptor 
IL27RA                0.038   class I cytokine receptor 
CRLF1                 0.033   cytokine receptor-like factor 1 
LEPR                  0.032   leptin receptor isoform 3 
LEPR                  0.032   leptin receptor isoform 2 
LEPR                  0.032   leptin receptor isoform 1 
IGDCC4                0.031   immunoglobulin superfamily, DCC subclass, member 4 [...
PRLR                  0.028   prolactin receptor 
PRTG                  0.021   protogenin 
COL7A1                0.020   alpha 1 type VII collagen precursor 
IL23R                 0.020   interleukin 23 receptor precursor 
ROBO3                 0.018   roundabout, axon guidance receptor, homolog 3 
COL12A1               0.017   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.017   collagen, type XII, alpha 1 long isoform precursor [...
PTPRQ                 0.016   protein tyrosine phosphatase, receptor type, Q [Hom...
SDK1                  0.016   sidekick 1 
NEO1                  0.015   neogenin homolog 1 
USH2A                 0.015   usherin isoform B 
CNTN3                 0.015   contactin 3 
CNTFR                 0.015   ciliary neurotrophic factor receptor preproprotein [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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