Guide to the Human Genome
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Name: CSF3R Sequence: fasta or formatted (769aa) NCBI GI: 27437042
Description:

colony stimulating factor 3 receptor isoform b precursor

Referenced in:

Interleukins and Their Receptors
Neutrophils, Eosinophils, and Basophils
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [863aa] colony stimulating factor 3 receptor isoform c precursor
alt prot [783aa] colony stimulating factor 3 receptor isoform d precursor
alt prot [836aa] colony stimulating factor 3 receptor isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         60           2
 C cysteine            3.4         26           2
 D aspartate           2.1         16           1
 E glutamate           4.7         36           2
 F phenylalanine       1.7         13           1
 G glycine             6.5         50           2
 H histidine           3.1         24           1
 I isoleucine          4.3         33           2
 K lysine              2.0         15           1
 L leucine            11.1         85           3
 M methionine          2.3         18           1
 N asparagine          3.0         23           1
 P proline            11.3         87           2
 Q glutamine           6.5         50           2
 R arginine            5.6         43           2
 S serine              9.5         73           2
 T threonine           6.0         46           2
 V valine              3.5         27           2
 W tryptophan          4.0         31           2
 Y tyrosine            1.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 3 receptor isoform b precu... 
CSF3R                 0.802   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.802   colony stimulating factor 3 receptor isoform c precu...
CSF3R                 0.802   colony stimulating factor 3 receptor isoform a precur...
IL6ST                 0.118   interleukin 6 signal transducer isoform 1 precursor ...
IL12RB2               0.079   interleukin 12 receptor, beta 2 precursor 
IL31RA                0.077   gp130-like monocyte receptor 
IL6ST                 0.062   interleukin 6 signal transducer isoform 2 precursor ...
LIFR                  0.044   leukemia inhibitory factor receptor precursor 
LIFR                  0.044   leukemia inhibitory factor receptor precursor [Homo...
CRLF1                 0.035   cytokine receptor-like factor 1 
LEPR                  0.034   leptin receptor isoform 3 
LEPR                  0.034   leptin receptor isoform 2 
LEPR                  0.034   leptin receptor isoform 1 
IL27RA                0.034   class I cytokine receptor 
PRLR                  0.030   prolactin receptor 
OSMR                  0.030   oncostatin M receptor 
IGDCC4                0.027   immunoglobulin superfamily, DCC subclass, member 4 [...
COL7A1                0.024   alpha 1 type VII collagen precursor 
PRTG                  0.021   protogenin 
IL23R                 0.021   interleukin 23 receptor precursor 
ROBO3                 0.019   roundabout, axon guidance receptor, homolog 3 
SDK1                  0.019   sidekick 1 
PTPRD                 0.018   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.018   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.018   protein tyrosine phosphatase, receptor type, D isofo...
CNTN5                 0.017   contactin 5 isoform long 
CNTN5                 0.017   contactin 5 isoform short 
PTPRQ                 0.017   protein tyrosine phosphatase, receptor type, Q [Hom...
COL12A1               0.016   collagen, type XII, alpha 1 short isoform precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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