Guide to the Human Genome
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Name: DIP2A Sequence: fasta or formatted (798aa) NCBI GI: 225735627
Description:

disco-interacting protein 2A isoform f

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [1110aa] disco-interacting protein 2A isoform e
alt prot [1567aa] disco-interacting protein 2A isoform g
alt prot [1571aa] disco-interacting protein 2A isoform a
alt prot [889aa] disco-interacting protein 2A isoform b
alt prot [841aa] disco-interacting protein 2A isoform c
alt prot [812aa] disco-interacting protein 2A isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         73           3
 C cysteine            1.8         14           1
 D aspartate           4.3         34           2
 E glutamate           5.1         41           2
 F phenylalanine       2.5         20           2
 G glycine             7.4         59           2
 H histidine           1.6         13           1
 I isoleucine          2.8         22           1
 K lysine              5.4         43           2
 L leucine            10.9         87           2
 M methionine          1.8         14           1
 N asparagine          2.1         17           1
 P proline             8.1         65           3
 Q glutamine           3.6         29           2
 R arginine            5.8         46           2
 S serine              8.5         68           3
 T threonine           7.4         59           2
 V valine              8.3         66           2
 W tryptophan          1.3         10           1
 Y tyrosine            2.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   disco-interacting protein 2A isoform f 
DIP2A                 0.987   disco-interacting protein 2A isoform a 
DIP2A                 0.987   disco-interacting protein 2A isoform c 
DIP2A                 0.987   disco-interacting protein 2A isoform b 
DIP2A                 0.978   disco-interacting protein 2A isoform g 
DIP2A                 0.934   disco-interacting protein 2A isoform d 
DIP2A                 0.872   disco-interacting protein 2A isoform e 
DIP2C                 0.672   DIP2 disco-interacting protein 2 homolog C 
DIP2B                 0.657   DIP2 disco-interacting protein 2 homolog B 
RP1L1                 0.015   retinitis pigmentosa 1-like 1 
OTOG                  0.014   PREDICTED: otogelin isoform 2 
OTOG                  0.014   PREDICTED: otogelin isoform 1 
OTOG                  0.013   PREDICTED: otogelin isoform 1 
OTOG                  0.013   PREDICTED: otogelin isoform 2 
OTOG                  0.013   PREDICTED: otogelin isoform 2 
OTOG                  0.013   PREDICTED: otogelin isoform 1 
MUC17                 0.011   mucin 17 
LOC100133756          0.011   PREDICTED: hypothetical protein, partial 
CLASP1                0.011   CLIP-associating protein 1 isoform 2 
CLASP1                0.011   CLIP-associating protein 1 isoform 3 
CLASP1                0.011   CLIP-associating protein 1 isoform 1 
TNIK                  0.010   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.010   TRAF2 and NCK interacting kinase isoform 1 
POM121C               0.010   POM121 membrane glycoprotein (rat)-like 
MUC12                 0.010   PREDICTED: mucin 12 
MUC12                 0.010   PREDICTED: mucin 12 
COL27A1               0.010   collagen, type XXVII, alpha 1 
OTX1                  0.010   orthodenticle homeobox 1 
LOC100133714          0.010   PREDICTED: similar to Mucin-12, partial 
MUC2                  0.009   mucin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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