Guide to the Human Genome
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Name: CSF3R Sequence: fasta or formatted (863aa) NCBI GI: 24496783
Description:

colony stimulating factor 3 receptor isoform c precursor

Referenced in:

Interleukins and Their Receptors
Neutrophils, Eosinophils, and Basophils
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [769aa] colony stimulating factor 3 receptor isoform b precursor
alt prot [783aa] colony stimulating factor 3 receptor isoform d precursor
alt prot [836aa] colony stimulating factor 3 receptor isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         52           2
 C cysteine            3.2         28           2
 D aspartate           2.8         24           2
 E glutamate           5.6         48           2
 F phenylalanine       2.0         17           1
 G glycine             7.3         63           2
 H histidine           3.4         29           1
 I isoleucine          3.9         34           2
 K lysine              2.2         19           2
 L leucine            13.6        117           5
 M methionine          1.9         16           1
 N asparagine          3.1         27           1
 P proline            10.3         89           2
 Q glutamine           6.4         55           2
 R arginine            3.9         34           1
 S serine              8.3         72           2
 T threonine           6.6         57           2
 V valine              4.2         36           2
 W tryptophan          3.4         29           2
 Y tyrosine            2.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   colony stimulating factor 3 receptor isoform c precu... 
CSF3R                 0.959   colony stimulating factor 3 receptor isoform a precur...
CSF3R                 0.859   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.718   colony stimulating factor 3 receptor isoform b precu...
IL6ST                 0.120   interleukin 6 signal transducer isoform 1 precursor ...
IL31RA                0.085   gp130-like monocyte receptor 
IL12RB2               0.072   interleukin 12 receptor, beta 2 precursor 
IL6ST                 0.055   interleukin 6 signal transducer isoform 2 precursor ...
LIFR                  0.043   leukemia inhibitory factor receptor precursor 
LIFR                  0.043   leukemia inhibitory factor receptor precursor [Homo...
OSMR                  0.037   oncostatin M receptor 
IL27RA                0.036   class I cytokine receptor 
CRLF1                 0.032   cytokine receptor-like factor 1 
LEPR                  0.031   leptin receptor isoform 3 
LEPR                  0.031   leptin receptor isoform 2 
LEPR                  0.031   leptin receptor isoform 1 
IGDCC4                0.030   immunoglobulin superfamily, DCC subclass, member 4 [...
PRLR                  0.027   prolactin receptor 
PRTG                  0.020   protogenin 
COL7A1                0.019   alpha 1 type VII collagen precursor 
IL23R                 0.019   interleukin 23 receptor precursor 
ROBO3                 0.017   roundabout, axon guidance receptor, homolog 3 
COL12A1               0.016   collagen, type XII, alpha 1 short isoform precursor ...
COL12A1               0.016   collagen, type XII, alpha 1 long isoform precursor [...
PTPRQ                 0.015   protein tyrosine phosphatase, receptor type, Q [Hom...
SDK1                  0.015   sidekick 1 
NEO1                  0.014   neogenin homolog 1 
USH2A                 0.014   usherin isoform B 
CNTN3                 0.014   contactin 3 
CNTFR                 0.014   ciliary neurotrophic factor receptor preproprotein [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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