Guide to the Human Genome
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Name: SLC16A8 Sequence: fasta or formatted (504aa) NCBI GI: 114796626
Description:

solute carrier family 16, member 8

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.3         77           3
 C cysteine            2.2         11           2
 D aspartate           3.8         19           1
 E glutamate           5.0         25           2
 F phenylalanine       5.0         25           2
 G glycine            12.1         61           2
 H histidine           0.4          2           1
 I isoleucine          2.2         11           2
 K lysine              1.0          5           1
 L leucine            14.5         73           3
 M methionine          2.4         12           1
 N asparagine          1.4          7           1
 P proline             7.1         36           3
 Q glutamine           1.0          5           2
 R arginine            6.9         35           3
 S serine              5.6         28           2
 T threonine           3.0         15           1
 V valine              8.1         41           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.4         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 8 
SLC16A3               0.507   solute carrier family 16, member 3 
SLC16A3               0.507   solute carrier family 16, member 3 
SLC16A3               0.507   solute carrier family 16, member 3 
SLC16A7               0.390   solute carrier family 16, member 7 
SLC16A1               0.348   solute carrier family 16, member 1 
SLC16A5               0.294   solute carrier family 16, member 5 
SLC16A11              0.238   solute carrier family 16, member 11 
LOC100133772          0.238   PREDICTED: similar to solute carrier family 16, mem...
SLC16A12              0.231   solute carrier family 16 (monocarboxylic acid trans...
SLC16A13              0.219   monocarboxylate transporter 13 
SLC16A6               0.190   solute carrier family 16, member 6 
SLC16A10              0.162   solute carrier family 16, member 10 
SLC16A14              0.145   solute carrier family 16 (monocarboxylic acid transp...
SLC16A2               0.142   solute carrier family 16, member 2 
SLC16A4               0.128   solute carrier family 16, member 4 
SLC16A9               0.113   solute carrier family 16 (monocarboxylic acid transp...
SLC17A9               0.011   vesicular nucleotide transporter SLC17A9 
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform e ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform c ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform f ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform d ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform h ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform g ...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform a p...
PCSK6                 0.010   paired basic amino acid cleaving system 4 isoform b ...
SLC17A4               0.008   solute carrier family 17 (sodium phosphate), member 4...
SLC18A2               0.008   solute carrier family 18 (vesicular monoamine), memb...
SLC18A1               0.008   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.008   solute carrier family 18 (vesicular monoamine), mem...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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