Guide to the Human Genome
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Name: SLC16A10 Sequence: fasta or formatted (515aa) NCBI GI: 18699730
Description:

solute carrier family 16, member 10

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         38           2
 C cysteine            2.5         13           2
 D aspartate           2.9         15           3
 E glutamate           4.5         23           2
 F phenylalanine       7.8         40           3
 G glycine            10.1         52           2
 H histidine           1.0          5           1
 I isoleucine          6.4         33           2
 K lysine              5.4         28           2
 L leucine            10.5         54           3
 M methionine          4.1         21           2
 N asparagine          1.6          8           1
 P proline             6.6         34           3
 Q glutamine           1.9         10           1
 R arginine            2.3         12           1
 S serine              8.7         45           4
 T threonine           3.7         19           2
 V valine              8.9         46           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 10 
SLC16A2               0.486   solute carrier family 16, member 2 
SLC16A8               0.156   solute carrier family 16, member 8 
SLC16A3               0.155   solute carrier family 16, member 3 
SLC16A3               0.155   solute carrier family 16, member 3 
SLC16A3               0.155   solute carrier family 16, member 3 
SLC16A11              0.151   solute carrier family 16, member 11 
SLC16A13              0.151   monocarboxylate transporter 13 
SLC16A7               0.148   solute carrier family 16, member 7 
SLC16A12              0.140   solute carrier family 16 (monocarboxylic acid trans...
SLC16A1               0.128   solute carrier family 16, member 1 
SLC16A5               0.126   solute carrier family 16, member 5 
SLC16A6               0.104   solute carrier family 16, member 6 
SLC16A14              0.099   solute carrier family 16 (monocarboxylic acid transp...
LOC100133772          0.097   PREDICTED: similar to solute carrier family 16, mem...
SLC16A9               0.090   solute carrier family 16 (monocarboxylic acid transp...
SLC16A4               0.066   solute carrier family 16, member 4 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 1 
FBXL6                 0.015   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.015   F-box and leucine-rich repeat protein 6 isoform 1 [H...
CNGB1                 0.014   cyclic nucleotide gated channel beta 1 isoform a [H...
BAG3                  0.014   BCL2-associated athanogene 3 
PELP1                 0.014   proline, glutamic acid and leucine rich protein 1 [...
SYN1                  0.014   synapsin I isoform Ia 
SYN1                  0.014   synapsin I isoform Ib 
SFPQ                  0.014   splicing factor proline/glutamine rich (polypyrimidin...
ZNF219                0.014   zinc finger protein 219 
ZNF219                0.014   zinc finger protein 219 
ZNF219                0.014   zinc finger protein 219 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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