Guide to the Human Genome
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Name: SLC16A6 Sequence: fasta or formatted (523aa) NCBI GI: 40789261
Description:

solute carrier family 16, member 6

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         44           2
 C cysteine            2.1         11           1
 D aspartate           2.9         15           2
 E glutamate           5.0         26           1
 F phenylalanine       7.6         40           3
 G glycine             7.6         40           2
 H histidine           1.9         10           3
 I isoleucine          8.2         43           2
 K lysine              4.4         23           2
 L leucine            10.7         56           2
 M methionine          3.1         16           1
 N asparagine          2.5         13           1
 P proline             4.2         22           2
 Q glutamine           2.7         14           2
 R arginine            3.8         20           2
 S serine              8.0         42           2
 T threonine           5.2         27           2
 V valine              8.2         43           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 6 
SLC16A7               0.208   solute carrier family 16, member 7 
SLC16A3               0.192   solute carrier family 16, member 3 
SLC16A3               0.192   solute carrier family 16, member 3 
SLC16A3               0.192   solute carrier family 16, member 3 
SLC16A1               0.190   solute carrier family 16, member 1 
SLC16A12              0.187   solute carrier family 16 (monocarboxylic acid trans...
SLC16A8               0.183   solute carrier family 16, member 8 
SLC16A4               0.160   solute carrier family 16, member 4 
SLC16A13              0.157   monocarboxylate transporter 13 
SLC16A14              0.148   solute carrier family 16 (monocarboxylic acid transp...
SLC16A9               0.147   solute carrier family 16 (monocarboxylic acid transp...
SLC16A11              0.130   solute carrier family 16, member 11 
SLC16A5               0.123   solute carrier family 16, member 5 
SLC16A10              0.104   solute carrier family 16, member 10 
LOC100133772          0.082   PREDICTED: similar to solute carrier family 16, mem...
SLC16A2               0.069   solute carrier family 16, member 2 
SLC22A4               0.014   solute carrier family 22 member 4 
SLC37A2               0.008   solute carrier family 37 (glycerol-3-phosphate tran...
SLC37A2               0.008   solute carrier family 37 (glycerol-3-phosphate trans...
SLC22A5               0.008   solute carrier family 22 member 5 
SPNS3                 0.008   spinster homolog 3 
OR5T1                 0.007   olfactory receptor, family 5, subfamily T, member 1 ...
IL27                  0.007   interleukin 27 
SLC18A2               0.007   solute carrier family 18 (vesicular monoamine), memb...
SLC30A10              0.007   solute carrier family 30 (zinc transporter), member ...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.006   solute carrier family 18 (vesicular monoamine), membe...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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