Guide to the Human Genome
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Name: SLC16A3 Sequence: fasta or formatted (465aa) NCBI GI: 109288012
Description:

solute carrier family 16, member 3

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [465aa] solute carrier family 16, member 3
alt mRNA [465aa] solute carrier family 16, member 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         45           3
 C cysteine            2.4         11           2
 D aspartate           3.0         14           1
 E glutamate           3.7         17           3
 F phenylalanine       7.5         35           2
 G glycine            11.6         54           2
 H histidine           1.1          5           1
 I isoleucine          4.3         20           2
 K lysine              3.4         16           2
 L leucine            12.9         60           3
 M methionine          2.8         13           1
 N asparagine          1.7          8           1
 P proline             6.0         28           2
 Q glutamine           1.7          8           1
 R arginine            3.9         18           2
 S serine              6.5         30           2
 T threonine           3.4         16           2
 V valine             10.5         49           2
 W tryptophan          0.9          4           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 3 
SLC16A3               1.000   solute carrier family 16, member 3 
SLC16A3               1.000   solute carrier family 16, member 3 
SLC16A8               0.545   solute carrier family 16, member 8 
SLC16A7               0.427   solute carrier family 16, member 7 
SLC16A1               0.393   solute carrier family 16, member 1 
SLC16A5               0.324   solute carrier family 16, member 5 
LOC100133772          0.265   PREDICTED: similar to solute carrier family 16, mem...
SLC16A11              0.248   solute carrier family 16, member 11 
SLC16A12              0.248   solute carrier family 16 (monocarboxylic acid trans...
SLC16A13              0.234   monocarboxylate transporter 13 
SLC16A6               0.214   solute carrier family 16, member 6 
SLC16A10              0.173   solute carrier family 16, member 10 
SLC16A2               0.168   solute carrier family 16, member 2 
SLC16A9               0.131   solute carrier family 16 (monocarboxylic acid transp...
SLC16A14              0.127   solute carrier family 16 (monocarboxylic acid transp...
SLC16A4               0.092   solute carrier family 16, member 4 
SLC18A1               0.016   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.014   solute carrier family 18 (vesicular monoamine), membe...
SLC18A2               0.011   solute carrier family 18 (vesicular monoamine), memb...
C6orf192              0.008   hypothetical protein LOC116843 
OR6A2                 0.007   olfactory receptor, family 6, subfamily A, member 2 ...
LAG3                  0.007   lymphocyte-activation protein 3 precursor 
SLC12A8               0.006   solute carrier family 12, member 8 
SLC22A18              0.006   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.006   tumor suppressing subtransferable candidate 5 [Homo...
PIGG                  0.006   phosphatidylinositol glycan anchor biosynthesis, cl...
PIGG                  0.006   phosphatidylinositol glycan anchor biosynthesis, cl...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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