Guide to the Human Genome
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Name: SLC18A2 Sequence: fasta or formatted (514aa) NCBI GI: 42476325
Description:

solute carrier family 18 (vesicular monoamine), member 2

Referenced in:

Acetylcholine
Catecholamines
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         47           2
 C cysteine            1.9         10           1
 D aspartate           3.5         18           2
 E glutamate           3.5         18           2
 F phenylalanine       5.3         27           2
 G glycine             7.8         40           2
 H histidine           1.4          7           1
 I isoleucine          9.5         49           2
 K lysine              3.1         16           1
 L leucine            11.5         59           3
 M methionine          5.1         26           2
 N asparagine          3.3         17           2
 P proline             5.4         28           2
 Q glutamine           2.9         15           1
 R arginine            2.7         14           2
 S serine              8.2         42           3
 T threonine           4.9         25           2
 V valine              6.6         34           3
 W tryptophan          1.0          5           1
 Y tyrosine            3.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 18 (vesicular monoamine), memb... 
SLC18A1               0.641   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.641   solute carrier family 18 (vesicular monoamine), membe...
SLC18A1               0.563   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.540   solute carrier family 18 (vesicular monoamine), mem...
SLC18A3               0.315   vesicular acetylcholine transporter 
C6orf192              0.076   hypothetical protein LOC116843 
MFSD8                 0.020   major facilitator superfamily domain containing 8 [H...
SLC17A5               0.016   sialin 
SLC16A13              0.015   monocarboxylate transporter 13 
SLC16A9               0.015   solute carrier family 16 (monocarboxylic acid transp...
SLC17A3               0.015   solute carrier family 17 (sodium phosphate), member...
SVOPL                 0.014   SVOP-like isoform 1 
SLC22A1               0.014   solute carrier family 22 member 1 isoform b 
SLC22A1               0.014   solute carrier family 22 member 1 isoform a 
SLC16A12              0.013   solute carrier family 16 (monocarboxylic acid trans...
MFSD10                0.012   major facilitator superfamily domain containing 10 ...
MFSD10                0.012   major facilitator superfamily domain containing 10 ...
SLC22A2               0.012   solute carrier family 22 member 2 
SLC16A2               0.012   solute carrier family 16, member 2 
SLC16A7               0.011   solute carrier family 16, member 7 
SLC2A12               0.011   solute carrier family 2 (facilitated glucose transpo...
SLC16A3               0.010   solute carrier family 16, member 3 
SLC16A3               0.010   solute carrier family 16, member 3 
SLC16A3               0.010   solute carrier family 16, member 3 
SLC16A14              0.010   solute carrier family 16 (monocarboxylic acid transp...
SLC22A6               0.010   solute carrier family 22 member 6 isoform d 
SLC22A6               0.010   solute carrier family 22 member 6 isoform c 
SLC22A6               0.010   solute carrier family 22 member 6 isoform b 
SLC22A6               0.010   solute carrier family 22 member 6 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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