Guide to the Human Genome
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Name: SLC16A12 Sequence: fasta or formatted (486aa) NCBI GI: 157041233
Description:

solute carrier family 16 (monocarboxylic acid transporters), member 12

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         37           2
 C cysteine            4.3         21           3
 D aspartate           2.7         13           1
 E glutamate           2.3         11           1
 F phenylalanine       5.6         27           2
 G glycine             8.0         39           2
 H histidine           1.6          8           1
 I isoleucine          5.6         27           2
 K lysine              2.9         14           1
 L leucine            13.4         65           2
 M methionine          2.9         14           1
 N asparagine          1.4          7           1
 P proline             4.1         20           2
 Q glutamine           3.9         19           2
 R arginine            3.5         17           2
 S serine              8.2         40           2
 T threonine           7.0         34           2
 V valine              9.1         44           2
 W tryptophan          1.4          7           1
 Y tyrosine            4.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16 (monocarboxylic acid trans... 
SLC16A7               0.247   solute carrier family 16, member 7 
SLC16A3               0.234   solute carrier family 16, member 3 
SLC16A3               0.234   solute carrier family 16, member 3 
SLC16A3               0.234   solute carrier family 16, member 3 
SLC16A8               0.234   solute carrier family 16, member 8 
SLC16A13              0.232   monocarboxylate transporter 13 
SLC16A11              0.212   solute carrier family 16, member 11 
SLC16A1               0.212   solute carrier family 16, member 1 
SLC16A4               0.201   solute carrier family 16, member 4 
SLC16A5               0.197   solute carrier family 16, member 5 
SLC16A6               0.197   solute carrier family 16, member 6 
SLC16A14              0.191   solute carrier family 16 (monocarboxylic acid transp...
LOC100133772          0.159   PREDICTED: similar to solute carrier family 16, mem...
SLC16A9               0.158   solute carrier family 16 (monocarboxylic acid transp...
SLC16A10              0.147   solute carrier family 16, member 10 
SLC16A2               0.131   solute carrier family 16, member 2 
SLC17A9               0.015   vesicular nucleotide transporter SLC17A9 
SLC18A2               0.014   solute carrier family 18 (vesicular monoamine), memb...
SLC22A18              0.013   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.013   tumor suppressing subtransferable candidate 5 [Homo...
SLC37A4               0.009   solute carrier family 37 (glucose-6-phosphate transpo...
MRGPRX2               0.008   MAS-related GPR, member X2 
SLC17A4               0.007   solute carrier family 17 (sodium phosphate), member 4...
MFSD8                 0.007   major facilitator superfamily domain containing 8 [H...
C6orf192              0.007   hypothetical protein LOC116843 
SLC17A2               0.006   solute carrier family 17 (sodium phosphate), member 2...
SLC40A1               0.005   solute carrier family 40 (iron-regulated transporter)...
SLC39A13              0.005   solute carrier family 39 (zinc transporter), member...
ORC3L                 0.004   origin recognition complex, subunit 3 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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