Guide to the Human Genome
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Name: SLC17A9 Sequence: fasta or formatted (436aa) NCBI GI: 154350196
Description:

vesicular nucleotide transporter SLC17A9

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         37           2
 C cysteine            2.8         12           1
 D aspartate           2.5         11           1
 E glutamate           3.0         13           2
 F phenylalanine       6.4         28           2
 G glycine             9.6         42           2
 H histidine           1.8          8           1
 I isoleucine          4.4         19           2
 K lysine              1.8          8           2
 L leucine            14.0         61           3
 M methionine          2.1          9           1
 N asparagine          1.8          8           1
 P proline             3.4         15           3
 Q glutamine           3.9         17           1
 R arginine            4.1         18           2
 S serine             10.6         46           2
 T threonine           5.7         25           2
 V valine              7.6         33           2
 W tryptophan          3.4         15           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vesicular nucleotide transporter SLC17A9 
SLC17A5               0.171   sialin 
SLC17A7               0.167   solute carrier family 17, member 7 
SLC17A6               0.165   solute carrier family 17 (sodium-dependent inorganic ...
SLC17A8               0.158   solute carrier family 17 (sodium-dependent inorganic...
SLC17A3               0.124   solute carrier family 17 (sodium phosphate), member...
SLC17A4               0.122   solute carrier family 17 (sodium phosphate), member 4...
SLC17A8               0.110   solute carrier family 17 (sodium-dependent inorgani...
SLC17A1               0.094   solute carrier family 17 (sodium phosphate), member...
SLC17A3               0.092   solute carrier family 17 (sodium phosphate), member...
SLC17A2               0.077   solute carrier family 17 (sodium phosphate), member 2...
SPNS2                 0.024   spinster homolog 2 
SLC16A11              0.020   solute carrier family 16, member 11 
SLC22A18              0.017   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.017   tumor suppressing subtransferable candidate 5 [Homo...
SLC2A10               0.017   solute carrier family 2 member 10 
SPNS1                 0.016   spinster homolog 1 isoform 1 
SPNS1                 0.016   spinster homolog 1 isoform 1 
SLC16A12              0.016   solute carrier family 16 (monocarboxylic acid trans...
SPNS1                 0.016   spinster homolog 1 isoform 2 
SLC16A14              0.016   solute carrier family 16 (monocarboxylic acid transp...
SPNS1                 0.013   spinster homolog 1 isoform 3 
SLC16A8               0.013   solute carrier family 16, member 8 
SVOPL                 0.012   SVOP-like isoform 1 
SLC16A13              0.012   monocarboxylate transporter 13 
SLC22A11              0.008   solute carrier family 22 member 11 
LOC146429             0.008   PREDICTED: hypothetical protein LOC146429 
LOC146429             0.008   PREDICTED: hypothetical protein LOC146429 isoform 6...
LOC146429             0.008   PREDICTED: hypothetical protein LOC146429 isoform 1...
SLC18A3               0.008   vesicular acetylcholine transporter 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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