Guide to the Human Genome
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Name: LOC100133772 Sequence: fasta or formatted (453aa) NCBI GI: 169217968
Description:

PREDICTED: similar to solute carrier family 16, member 5

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         43           2
 C cysteine            3.1         14           2
 D aspartate           2.2         10           1
 E glutamate           2.4         11           1
 F phenylalanine       6.8         31           2
 G glycine             8.8         40           2
 H histidine           2.0          9           1
 I isoleucine          4.6         21           2
 K lysine              2.2         10           2
 L leucine            14.6         66           3
 M methionine          3.1         14           1
 N asparagine          2.4         11           2
 P proline             6.2         28           5
 Q glutamine           3.5         16           2
 R arginine            4.9         22           3
 S serine              8.2         37           2
 T threonine           4.0         18           1
 V valine              6.8         31           1
 W tryptophan          2.0          9           1
 Y tyrosine            2.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to solute carrier family 16, mem... 
SLC16A5               0.968   solute carrier family 16, member 5 
SLC16A3               0.267   solute carrier family 16, member 3 
SLC16A3               0.267   solute carrier family 16, member 3 
SLC16A3               0.267   solute carrier family 16, member 3 
SLC16A8               0.258   solute carrier family 16, member 8 
SLC16A7               0.240   solute carrier family 16, member 7 
SLC16A1               0.186   solute carrier family 16, member 1 
SLC16A12              0.170   solute carrier family 16 (monocarboxylic acid trans...
SLC16A11              0.149   solute carrier family 16, member 11 
SLC16A13              0.141   monocarboxylate transporter 13 
SLC16A14              0.117   solute carrier family 16 (monocarboxylic acid transp...
SLC16A2               0.111   solute carrier family 16, member 2 
SLC16A10              0.110   solute carrier family 16, member 10 
SLC16A6               0.093   solute carrier family 16, member 6 
SLC16A9               0.079   solute carrier family 16 (monocarboxylic acid transp...
SLC16A4               0.059   solute carrier family 16, member 4 
SLC18A1               0.013   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.013   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.013   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.013   solute carrier family 18 (vesicular monoamine), membe...
SLC17A3               0.011   solute carrier family 17 (sodium phosphate), member...
SLC17A3               0.011   solute carrier family 17 (sodium phosphate), member...
MFSD1                 0.011   major facilitator superfamily domain containing 1 [H...
SLC18A2               0.010   solute carrier family 18 (vesicular monoamine), memb...
SLC45A1               0.009   DNB5 
GOLT1A                0.009   golgi transport 1 homolog A 
SLC17A4               0.008   solute carrier family 17 (sodium phosphate), member 4...
SLC22A10              0.008   solute carrier family 22, member 10 
OR52D1                0.008   olfactory receptor, family 52, subfamily D, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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