Guide to the Human Genome
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Name: SLC16A7 Sequence: fasta or formatted (478aa) NCBI GI: 24431958
Description:

solute carrier family 16, member 7

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         39           2
 C cysteine            1.5          7           2
 D aspartate           2.3         11           2
 E glutamate           3.3         16           2
 F phenylalanine       7.1         34           2
 G glycine             8.4         40           2
 H histidine           1.0          5           1
 I isoleucine          5.9         28           2
 K lysine              5.9         28           2
 L leucine            10.9         52           3
 M methionine          3.3         16           1
 N asparagine          3.8         18           1
 P proline             5.9         28           3
 Q glutamine           2.3         11           2
 R arginine            2.9         14           1
 S serine              9.6         46           3
 T threonine           4.2         20           2
 V valine              8.2         39           2
 W tryptophan          1.3          6           1
 Y tyrosine            4.2         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 7 
SLC16A1               0.592   solute carrier family 16, member 1 
SLC16A3               0.416   solute carrier family 16, member 3 
SLC16A3               0.416   solute carrier family 16, member 3 
SLC16A3               0.416   solute carrier family 16, member 3 
SLC16A8               0.407   solute carrier family 16, member 8 
SLC16A5               0.287   solute carrier family 16, member 5 
SLC16A12              0.254   solute carrier family 16 (monocarboxylic acid trans...
LOC100133772          0.232   PREDICTED: similar to solute carrier family 16, mem...
SLC16A13              0.228   monocarboxylate transporter 13 
SLC16A11              0.225   solute carrier family 16, member 11 
SLC16A6               0.225   solute carrier family 16, member 6 
SLC16A14              0.166   solute carrier family 16 (monocarboxylic acid transp...
SLC16A4               0.163   solute carrier family 16, member 4 
SLC16A10              0.161   solute carrier family 16, member 10 
SLC16A2               0.153   solute carrier family 16, member 2 
SLC16A9               0.131   solute carrier family 16 (monocarboxylic acid transp...
SLC18A1               0.017   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.017   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.017   solute carrier family 18 (vesicular monoamine), mem...
SLC18A1               0.017   solute carrier family 18 (vesicular monoamine), membe...
SLC18A2               0.012   solute carrier family 18 (vesicular monoamine), memb...
MFSD6                 0.011   major facilitator superfamily domain containing 6 [...
SLC22A8               0.008   solute carrier family 22 member 8 
SPNS3                 0.006   spinster homolog 3 
TMC7                  0.005   transmembrane channel-like 7 isoform b 
TMC7                  0.005   transmembrane channel-like 7 isoform a 
WASF2                 0.005   WAS protein family, member 2 
TM9SF3                0.005   transmembrane 9 superfamily member 3 
HTT                   0.004   huntingtin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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