CNGB1 12257

Name: CNGB1	Sequence: fasta or formatted (299aa)		NCBI GI: 208431781
Description: cyclic nucleotide gated channel beta 1 isoform b		Referenced in: Calcium and TRP Cation Channels Photoreceptors and Related Functions
Other entries for this name: alt prot [1251aa] cyclic nucleotide gated channel beta 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 24 2 C cysteine 0.7 2 1 D aspartate 3.3 10 1 E glutamate 14.4 43 4 F phenylalanine 0.3 1 1 G glycine 6.4 19 2 H histidine 1.3 4 1 I isoleucine 2.7 8 1 K lysine 3.7 11 1 L leucine 8.4 25 3 M methionine 3.0 9 1 N asparagine 1.3 4 1 P proline 15.1 45 2 Q glutamine 6.4 19 1 R arginine 5.0 15 2 S serine 6.4 19 2 T threonine 6.0 18 1 V valine 6.0 18 1 W tryptophan 1.7 5 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cyclic nucleotide gated channel beta 1 isoform b [H... CNGB1 0.976 cyclic nucleotide gated channel beta 1 isoform a [H... TTN 0.051 titin isoform N2-A SETD1A 0.051 SET domain containing 1A PRG4 0.044 proteoglycan 4 isoform D PRG4 0.044 proteoglycan 4 isoform C PRG4 0.044 proteoglycan 4 isoform B PRG4 0.044 proteoglycan 4 isoform A KIAA0754 0.043 hypothetical protein LOC643314 NCOR2 0.041 nuclear receptor co-repressor 2 isoform 1 GNAS 0.039 GNAS complex locus alex SETD1B 0.038 SET domain containing 1B FMNL1 0.036 formin-like 1 NCOR2 0.034 nuclear receptor co-repressor 2 isoform 2 FSCB 0.034 fibrous sheath CABYR binding protein SMTNL1 0.034 smoothelin-like 1 CUX2 0.034 cut-like 2 TTBK1 0.034 tau tubulin kinase 1 C2orf55 0.034 hypothetical protein LOC343990 EFS 0.034 embryonal Fyn-associated substrate isoform 2 EFS 0.034 embryonal Fyn-associated substrate isoform 1 FMN1 0.034 formin 1 PPM1E 0.034 protein phosphatase 1E MICALL1 0.034 molecule interacting with Rab13 KIAA1949 0.032 phostensin KIAA1949 0.032 phostensin PRR12 0.031 proline rich 12 PCLO 0.031 piccolo isoform 2 PCLO 0.031 piccolo isoform 1 RGL4 0.029 ral guanine nucleotide dissociation stimulator-like ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.