Guide to the Human Genome
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Name: RASSF9 Sequence: fasta or formatted (435aa) NCBI GI: 114155158
Description:

Ras association (RalGDS/AF-6) domain family (N-terminal) member 9

Referenced in:

Additional Protein Modifications
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           2
 C cysteine            1.6          7           1
 D aspartate           6.7         29           1
 E glutamate          11.5         50           2
 F phenylalanine       2.5         11           1
 G glycine             3.4         15           1
 H histidine           2.5         11           1
 I isoleucine          5.3         23           2
 K lysine              9.4         41           1
 L leucine            10.8         47           2
 M methionine          2.1          9           1
 N asparagine          4.4         19           1
 P proline             3.4         15           2
 Q glutamine           4.6         20           2
 R arginine            4.4         19           1
 S serine              8.0         35           2
 T threonine           5.1         22           2
 V valine              5.7         25           2
 W tryptophan          1.4          6           1
 Y tyrosine            2.3         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association (RalGDS/AF-6) domain family (N-term... 
RASSF10               0.252   Ras association (RalGDS/AF-6) domain family (N-term...
RASSF8                0.066   Ras association (RalGDS/AF-6) domain family (N-termi...
AKAP9                 0.028   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.028   A-kinase anchor protein 9 isoform 3 
OFD1                  0.024   oral-facial-digital syndrome 1 
CCDC88A               0.023   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.023   coiled-coil domain containing 88A isoform 1 
PPL                   0.023   periplakin 
GOLGA4                0.021   golgi autoantigen, golgin subfamily a, 4 
CEP290                0.020   centrosomal protein 290kDa 
MYH10                 0.020   myosin, heavy polypeptide 10, non-muscle 
CENPE                 0.020   centromere protein E 
GCC2                  0.019   GRIP and coiled-coil domain-containing 2 
TAX1BP1               0.018   Tax1 (human T-cell leukemia virus type I) binding p...
TAX1BP1               0.018   Tax1 (human T-cell leukemia virus type I) binding pr...
FAM184A               0.018   hypothetical protein LOC79632 isoform 2 
CENPF                 0.018   centromere protein F 
CLSPN                 0.018   claspin 
HOOK1                 0.018   hook homolog 1 
FAM184A               0.018   hypothetical protein LOC79632 isoform 1 
DNAJA2                0.017   DnaJ subfamily A member 2 
SYCP1                 0.017   synaptonemal complex protein 1 
C14orf145             0.017   hypothetical protein LOC145508 
ERC1                  0.017   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.017   RAB6-interacting protein 2 isoform delta 
NAP5                  0.015   Nck-associated protein 5 isoform 2 
NAP5                  0.015   Nck-associated protein 5 isoform 1 
ROCK2                 0.015   Rho-associated, coiled-coil containing protein kinas...
CGNL1                 0.015   cingulin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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