Guide to the Human Genome
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Name: C14orf145 Sequence: fasta or formatted (1094aa) NCBI GI: 64085252
Description:

hypothetical protein LOC145508

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         56           2
 C cysteine            1.0         11           1
 D aspartate           6.0         66           2
 E glutamate          13.6        149           3
 F phenylalanine       1.7         19           1
 G glycine             3.1         34           2
 H histidine           3.3         36           2
 I isoleucine          3.0         33           2
 K lysine              9.3        102           2
 L leucine            12.5        137           2
 M methionine          1.6         18           1
 N asparagine          3.1         34           2
 P proline             1.1         12           2
 Q glutamine           8.2         90           2
 R arginine            8.6         94           2
 S serine              8.7         95           3
 T threonine           5.1         56           1
 V valine              3.0         33           2
 W tryptophan          0.5          6           1
 Y tyrosine            1.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC145508 
MYH10                 0.064   myosin, heavy polypeptide 10, non-muscle 
ERC1                  0.061   RAB6-interacting protein 2 isoform epsilon 
CENPE                 0.061   centromere protein E 
ERC1                  0.060   RAB6-interacting protein 2 isoform delta 
EEA1                  0.060   early endosome antigen 1, 162kD 
TCHH                  0.060   trichohyalin 
MYH11                 0.060   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.060   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.060   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.060   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH13                 0.058   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH9                  0.057   myosin, heavy polypeptide 9, non-muscle 
CENPF                 0.057   centromere protein F 
MYH15                 0.056   myosin, heavy polypeptide 15 
CCDC88A               0.055   coiled-coil domain containing 88A isoform 2 
MYH6                  0.055   myosin heavy chain 6 
MYH14                 0.054   myosin, heavy chain 14 isoform 1 
MYH14                 0.054   myosin, heavy chain 14 isoform 2 
MYH14                 0.054   myosin, heavy chain 14 isoform 3 
CCDC88A               0.054   coiled-coil domain containing 88A isoform 1 
MYH7B                 0.054   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
DSP                   0.053   desmoplakin isoform I 
CROCC                 0.053   ciliary rootlet coiled-coil 
CEP250                0.053   centrosomal protein 2 
PLEC1                 0.053   plectin 1 isoform 11 
PLEC1                 0.053   plectin 1 isoform 10 
PLEC1                 0.053   plectin 1 isoform 8 
PLEC1                 0.053   plectin 1 isoform 7 
PLEC1                 0.053   plectin 1 isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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