Guide to the Human Genome
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Name: RASSF10 Sequence: fasta or formatted (615aa) NCBI GI: 122937480
Description:

Ras association (RalGDS/AF-6) domain family (N-terminal) member 10

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         62           4
 C cysteine            2.3         14           1
 D aspartate           5.2         32           3
 E glutamate           9.9         61           2
 F phenylalanine       0.8          5           1
 G glycine             7.8         48           3
 H histidine           2.0         12           1
 I isoleucine          1.6         10           1
 K lysine              2.6         16           2
 L leucine            10.4         64           3
 M methionine          1.6         10           1
 N asparagine          1.5          9           1
 P proline             7.2         44           2
 Q glutamine           5.9         36           3
 R arginine           11.5         71           5
 S serine              8.3         51           3
 T threonine           3.9         24           2
 V valine              5.0         31           2
 W tryptophan          1.5          9           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras association (RalGDS/AF-6) domain family (N-term... 
RASSF9                0.176   Ras association (RalGDS/AF-6) domain family (N-term...
MYH15                 0.022   myosin, heavy polypeptide 15 
PLEC1                 0.021   plectin 1 isoform 11 
PLEC1                 0.021   plectin 1 isoform 10 
PLEC1                 0.021   plectin 1 isoform 8 
PLEC1                 0.021   plectin 1 isoform 7 
PLEC1                 0.021   plectin 1 isoform 6 
PLEC1                 0.021   plectin 1 isoform 3 
PLEC1                 0.021   plectin 1 isoform 2 
PLEC1                 0.021   plectin 1 isoform 1 
LOC647042             0.019   PREDICTED: hypothetical protein isoform 1 
ZNF853                0.017   zinc finger protein 853 
CROCC                 0.015   ciliary rootlet coiled-coil 
LOC100133220          0.014   PREDICTED: hypothetical protein 
BSN                   0.013   bassoon protein 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform b 
CIT                   0.012   citron 
HOMER2                0.012   homer 2 isoform 2 
HOMER2                0.012   homer 2 isoform 1 
C9orf93               0.012   hypothetical protein LOC203238 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 1 
MAP4K4                0.012   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.012   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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