BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|218563700 ChaC, cation transport regulator-like 1 isoform b [Homo sapiens] (219 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|218563700 ChaC, cation transport regulator-like 1 isoform b [... 465 e-131 gi|218563698 ChaC, cation transport regulator-like 1 isoform a [... 444 e-125 gi|56790287 ChaC, cation transport regulator-like 2 [Homo sapiens] 131 5e-31 gi|19924099 synapsin I isoform Ia [Homo sapiens] 37 0.010 gi|19924097 synapsin I isoform Ib [Homo sapiens] 37 0.010 gi|118402590 myosin XV [Homo sapiens] 37 0.013 gi|78042577 MAP7 domain containing 1 [Homo sapiens] 36 0.022 gi|47132519 Ras association and pleckstrin homology domains 1 is... 35 0.038 gi|45827729 scribble isoform b [Homo sapiens] 35 0.038 gi|45827731 scribble isoform a [Homo sapiens] 35 0.038 gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.038 gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 33 0.25 gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 32 0.32 gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 32 0.32 gi|148298722 zinc finger protein 185 [Homo sapiens] 32 0.42 gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 32 0.42 gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 32 0.42 gi|157168329 formin 1 [Homo sapiens] 32 0.55 gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens] 32 0.55 gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens] 32 0.55 gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 32 0.55 gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 32 0.55 gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 32 0.55 gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 31 0.72 gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 31 0.72 gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo ... 31 0.72 gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 31 0.72 gi|89886484 XK, Kell blood group complex subunit-related family,... 31 0.72 gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 31 0.72 gi|41350201 epsin 1 isoform c [Homo sapiens] 31 0.72 >gi|218563700 ChaC, cation transport regulator-like 1 isoform b [Homo sapiens] Length = 219 Score = 465 bits (1197), Expect = e-131 Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT Sbjct: 1 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60 Query: 61 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP Sbjct: 61 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120 Query: 121 GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA 180 GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA Sbjct: 121 GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA 180 Query: 181 DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV 219 DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV Sbjct: 181 DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV 219 >gi|218563698 ChaC, cation transport regulator-like 1 isoform a [Homo sapiens] Length = 264 Score = 444 bits (1141), Expect = e-125 Identities = 219/264 (82%), Positives = 219/264 (82%), Gaps = 45/264 (17%) Query: 1 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT Sbjct: 1 MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60 Query: 61 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP Sbjct: 61 PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120 Query: 121 GRVVTLLEDHEGCTWGVAYQVQGE------------------------------------ 144 GRVVTLLEDHEGCTWGVAYQVQGE Sbjct: 121 GRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPL 180 Query: 145 ---------QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 195 QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL Sbjct: 181 KALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 240 Query: 196 AAIVDAVGTMLPCFCPTEQALALV 219 AAIVDAVGTMLPCFCPTEQALALV Sbjct: 241 AAIVDAVGTMLPCFCPTEQALALV 264 >gi|56790287 ChaC, cation transport regulator-like 2 [Homo sapiens] Length = 184 Score = 131 bits (329), Expect = 5e-31 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 43/167 (25%) Query: 75 LWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCT 134 +W+FGYGSL+W+ DF Y D VG++ YSRRFWQG T HRG PGRVVTL+ED GC Sbjct: 1 MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCV 60 Query: 135 WGVAYQVQ-GEQ------------------------------------------NPGYLG 151 WGVAY++ G++ NP YLG Sbjct: 61 WGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVIFYPKDPTTKPFSVLLYIGTCDNPDYLG 120 Query: 152 PAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAI 198 PAP E IA QI G SG N EYL LA+ ++ P+ DEHL A+ Sbjct: 121 PAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFAL 167 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 37.4 bits (85), Expect = 0.010 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 10 SGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQFPRN 68 SGA PG R+ P++PPGP Q P T PPT+Q P PS P Sbjct: 578 SGAPPGGQQRQG-------PPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630 Query: 69 DGDPQ 73 PQ Sbjct: 631 RPKPQ 635 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Query: 35 GPIPVPGTM---KQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73 G P PG + +Q S P PP Q P P P+ PQ Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQ 475 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 37.4 bits (85), Expect = 0.010 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 10 SGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQFPRN 68 SGA PG R+ P++PPGP Q P T PPT+Q P PS P Sbjct: 578 SGAPPGGQQRQG-------PPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630 Query: 69 DGDPQ 73 PQ Sbjct: 631 RPKPQ 635 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Query: 35 GPIPVPGTM---KQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73 G P PG + +Q S P PP Q P P P+ PQ Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQ 475 >gi|118402590 myosin XV [Homo sapiens] Length = 3530 Score = 37.0 bits (84), Expect = 0.013 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 14 PGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESA-----APNTPPTSQSPTPSAQFPRN 68 P V R RA + + RRPP P P P T+ SA P PP+S P P Sbjct: 625 PIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPAPPLSPAL 684 Query: 69 DGDPQALWIFGYGSLVWRP 87 G P+ YGSL P Sbjct: 685 SGLPRP--ASPYGSLRRHP 701 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 12/48 (25%) Query: 2 GGAQLELPS--------GARPGVCVRRSFRAHAGDQPRRPPGPIPVPG 41 G A LE P+ G +PG + D PRRPP P P+PG Sbjct: 2402 GDADLEKPTAIAYRMKGGGQPG----GGSSSGTEDTPRRPPEPKPIPG 2445 >gi|78042577 MAP7 domain containing 1 [Homo sapiens] Length = 841 Score = 36.2 bits (82), Expect = 0.022 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 3 GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62 G + EL +GA P V R P P P P P + P+TPP ++ T S Sbjct: 4 GPRAELGAGAPPAVVARTP--PEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSS 61 Query: 63 AQFPRNDGDP 72 Q P P Sbjct: 62 KQLPLEPESP 71 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Query: 29 QPRRPPGPI-PVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73 +P P G + P P ++ES P++ S+ PTP A PR+ P+ Sbjct: 67 EPESPSGQVGPRPAPPQEES--PSSEAKSRGPTPPAMGPRDARPPR 110 >gi|47132519 Ras association and pleckstrin homology domains 1 isoform 1 [Homo sapiens] Length = 1250 Score = 35.4 bits (80), Expect = 0.038 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS------AQFP 66 P PP P+P P KQ+S PP+ SP PS +QFP Sbjct: 828 PPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFP 870 Score = 28.1 bits (61), Expect = 6.1 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 9/32 (28%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTP 61 P PP P+P P P PP + SPTP Sbjct: 928 PPPPPSPVPAP---------PPPPPPTASPTP 950 >gi|45827729 scribble isoform b [Homo sapiens] Length = 1630 Score = 35.4 bits (80), Expect = 0.038 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 3 GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62 G+ +PSGA G + S + +G QP PP P +P +KQ A PTS P + Sbjct: 1278 GSVQRVPSGAAGGK-MAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDA 1336 Query: 63 AQFPRNDG 70 P G Sbjct: 1337 PAQPPTPG 1344 >gi|45827731 scribble isoform a [Homo sapiens] Length = 1655 Score = 35.4 bits (80), Expect = 0.038 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 3 GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62 G+ +PSGA G + S + +G QP PP P +P +KQ A PTS P + Sbjct: 1278 GSVQRVPSGAAGGK-MAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDA 1336 Query: 63 AQFPRNDG 70 P G Sbjct: 1337 PAQPPTPG 1344 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 35.4 bits (80), Expect = 0.038 Identities = 15/43 (34%), Positives = 19/43 (44%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDP 72 P P G +P T P TP + + PTP A P + G P Sbjct: 1340 PPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP 1382 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 27 GDQPRRPP--GPIPVPGTMKQESAAPNTPPTSQSPTPSAQFP 66 G PP P P T +P TPP +PTP A P Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP 1340 >gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo sapiens] Length = 425 Score = 32.7 bits (73), Expect = 0.25 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 14/74 (18%) Query: 2 GGAQLELPSGARPG-VCVRRSFRAHAGDQ-------PRRPPGPIP------VPGTMKQES 47 GGA E G G + + +F AG P PP P P PGT+ +E+ Sbjct: 351 GGAGAERDRGGASGFLTLHNAFPKEAGGGVTVTVTGPPAPPAPAPPAPSAPAPGTLAKEA 410 Query: 48 AAPNTPPTSQSPTP 61 AA NT ++ TP Sbjct: 411 AASNTNTLNRKTTP 424 >gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD subunit [Homo sapiens] Length = 551 Score = 32.3 bits (72), Expect = 0.32 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Query: 27 GDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQ-----FPRNDGDP 72 G P RPPGP+ P T+ P PP + P P P N G P Sbjct: 321 GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP 371 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%) Query: 27 GDQPRRPP---GPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQA 74 G P PP GP P PG P PP + +P P P P A Sbjct: 304 GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354 >gi|154355000 KH-type splicing regulatory protein [Homo sapiens] Length = 711 Score = 32.3 bits (72), Expect = 0.32 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 21 SFRAHAGDQPRRP-PGPIPVPGTMKQESAAPNTPPTSQS 58 ++ +H QP P PGP P P + P PPT QS Sbjct: 578 AYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQS 616 >gi|148298722 zinc finger protein 185 [Homo sapiens] Length = 689 Score = 32.0 bits (71), Expect = 0.42 Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 28 DQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRND 69 D+P P G P Q+ A P+TP SP+ S QF R + Sbjct: 489 DRPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVRRE 530 Score = 30.4 bits (67), Expect = 1.2 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Query: 3 GAQLELPSGARPGVCVRRSFRAHAGDQPR-RPPGPIPVPGTMKQESAAPNTPPTSQSPTP 61 G +ELPSG R + + AG+ P+ RPP G + + T P S P Sbjct: 50 GRTIELPSGRS-----RATSFSSAGEVPKPRPPSTRAPTGYIIR---GVFTKPIDSSSQP 101 Query: 62 SAQFPRNDGDPQA 74 QFP+ +G P++ Sbjct: 102 QQQFPKANGTPKS 114 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/42 (33%), Positives = 20/42 (47%) Query: 28 DQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRND 69 ++P P G P Q+ A P+TP SP+ S Q R + Sbjct: 423 ERPGAPRGGQGDPAVPAQQPADPSTPERQSSPSGSEQLVRRE 464 >gi|139394604 bromo adjacent homology domain containing 1 [Homo sapiens] Length = 780 Score = 32.0 bits (71), Expect = 0.42 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 6 LELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQF 65 LE P G RP + + +A +P RP P P KQE P+ P SP P Sbjct: 304 LESPLGLRPHLPLLMGGQAALKPEPGRPGEESPAP---KQELHQPSFPTPQLSPLP---M 357 Query: 66 PRNDGDPQALWI 77 P N D L + Sbjct: 358 PGNPADYNGLCV 369 >gi|13376335 hypothetical protein LOC79946 [Homo sapiens] Length = 257 Score = 32.0 bits (71), Expect = 0.42 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 12/58 (20%) Query: 10 SGARPGVCVRRSFRAHAG----------DQPRRPPGPIPVPGTMKQESAAPNTPPTSQ 57 S A PG C+R S R H +PRRP GP P + A P PP S+ Sbjct: 86 SAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRP--TPRPCAGPAPPPASR 141 >gi|157168329 formin 1 [Homo sapiens] Length = 1196 Score = 31.6 bits (70), Expect = 0.55 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDP 72 P PP P P P SA P PP P P++ P N G P Sbjct: 678 PPLPPPPPPPPPLPPPSSAGP-PPPPPPPPLPNSPAPPNPGGP 719 >gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens] Length = 205 Score = 31.6 bits (70), Expect = 0.55 Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 9/124 (7%) Query: 19 RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSP---TPSAQFPRNDGDPQAL 75 +R + AGD PPG P PG + P S+ P T Q P G Sbjct: 25 QRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGP 84 Query: 76 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQ-GDTFHRGSDKMPGRVVTLLED--HEG 132 + +V + F R Y R F + H GR T++E+ +G Sbjct: 85 ALSPVPPVV---HLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141 Query: 133 CTWG 136 WG Sbjct: 142 VNWG 145 >gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens] Length = 239 Score = 31.6 bits (70), Expect = 0.55 Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 9/124 (7%) Query: 19 RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSP---TPSAQFPRNDGDPQAL 75 +R + AGD PPG P PG + P S+ P T Q P G Sbjct: 25 QRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGP 84 Query: 76 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQ-GDTFHRGSDKMPGRVVTLLED--HEG 132 + +V + F R Y R F + H GR T++E+ +G Sbjct: 85 ALSPVPPVV---HLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141 Query: 133 CTWG 136 WG Sbjct: 142 VNWG 145 >gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6 preproprotein [Homo sapiens] Length = 863 Score = 31.6 bits (70), Expect = 0.55 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 PSGARPGVCVRRSFRAHAGDQPRRPPGPIPV-PGTMKQESAAPNTPPTSQSPTPS 62 PS P V + +A D+P P P+P P +S P PP + P P+ Sbjct: 770 PSRPLPPDPVSKRLQAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPA 824 >gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5 preproprotein [Homo sapiens] Length = 862 Score = 31.6 bits (70), Expect = 0.55 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 9 PSGARPGVCVRRSFRAHAGDQPRRPPGPIPV-PGTMKQESAAPNTPPTSQSPTPS 62 PS P V + +A D+P P P+P P +S P PP + P P+ Sbjct: 769 PSRPLPPDPVSKRLQAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPA 823 >gi|4505463 contactin associated protein 1 precursor [Homo sapiens] Length = 1384 Score = 31.6 bits (70), Expect = 0.55 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 24 AHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTS---QSPTPS-AQFPRNDGDPQAL 75 AH +PP P P + +AAPN P S +PTP+ A PR+ PQ L Sbjct: 1323 AHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQIL 1378 >gi|222352122 hypothetical protein LOC284297 [Homo sapiens] Length = 1573 Score = 31.2 bits (69), Expect = 0.72 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Query: 34 PGPIPVPGTMKQESAAPNTPP--TSQSPTPSAQFPRNDGDP 72 P P P+P K+ ++ P+TP TS SPT S Q P +D P Sbjct: 1086 PSPTPLPTLPKELTSDPSTPSEVTSLSPT-SEQVPESDTTP 1125 >gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo sapiens] Length = 1059 Score = 31.2 bits (69), Expect = 0.72 Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDG 70 P PP +P P +AAP+T + TP A P DG Sbjct: 289 PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329 >gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo sapiens] Length = 80 Score = 31.2 bits (69), Expect = 0.72 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 5/58 (8%) Query: 11 GARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRN 68 G RP R+ R H R P P+P T + AP P ++ TP PRN Sbjct: 28 GERPPPASARTLRTHL-----RLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPRN 80 >gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo sapiens] Length = 1059 Score = 31.2 bits (69), Expect = 0.72 Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 30 PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDG 70 P PP +P P +AAP+T + TP A P DG Sbjct: 289 PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329 >gi|89886484 XK, Kell blood group complex subunit-related family, member 6 isoform b [Homo sapiens] Length = 641 Score = 31.2 bits (69), Expect = 0.72 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Query: 19 RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQALWI 77 RRS A GDQP +PP PG +Q P TP ++ P Q R D LWI Sbjct: 83 RRSAAADGGDQPLQPPA---APGAGRQ----PPTPSAARPEPPPPQVERPWLD--CLWI 132 >gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo sapiens] Length = 1130 Score = 31.2 bits (69), Expect = 0.72 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Query: 30 PRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQ 64 P PPGP+P G+M P+ P S P PSA+ Sbjct: 664 PFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSAR 699 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 33 PPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFP 66 PP P P P AP PPT+ P P+ + P Sbjct: 796 PPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEP 829 >gi|41350201 epsin 1 isoform c [Homo sapiens] Length = 550 Score = 31.2 bits (69), Expect = 0.72 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Query: 26 AGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT---PSAQFPRNDGDPQALWIFGYGS 82 AG+ P R PG + G + A +PP + +PT P+ + P + P A + S Sbjct: 402 AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA-LVDLDS 460 Query: 83 LVWRP 87 LV RP Sbjct: 461 LVSRP 465 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.138 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,261,390 Number of Sequences: 37866 Number of extensions: 663580 Number of successful extensions: 5580 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 147 Number of HSP's that attempted gapping in prelim test: 4921 Number of HSP's gapped (non-prelim): 784 length of query: 219 length of database: 18,247,518 effective HSP length: 98 effective length of query: 121 effective length of database: 14,536,650 effective search space: 1758934650 effective search space used: 1758934650 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.