Guide to the Human Genome
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Search of human proteins with 218563700

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|218563700 ChaC, cation transport regulator-like 1 isoform b
[Homo sapiens]
         (219 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|218563700 ChaC, cation transport regulator-like 1 isoform b [...   465   e-131
gi|218563698 ChaC, cation transport regulator-like 1 isoform a [...   444   e-125
gi|56790287 ChaC, cation transport regulator-like 2 [Homo sapiens]    131   5e-31
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       37   0.010
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       37   0.010
gi|118402590 myosin XV [Homo sapiens]                                  37   0.013
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    36   0.022
gi|47132519 Ras association and pleckstrin homology domains 1 is...    35   0.038
gi|45827729 scribble isoform b [Homo sapiens]                          35   0.038
gi|45827731 scribble isoform a [Homo sapiens]                          35   0.038
gi|163965366 nascent polypeptide-associated complex alpha subuni...    35   0.038
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H...    33   0.25 
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    32   0.32 
gi|154355000 KH-type splicing regulatory protein [Homo sapiens]        32   0.32 
gi|148298722 zinc finger protein 185 [Homo sapiens]                    32   0.42 
gi|139394604 bromo adjacent homology domain containing 1 [Homo s...    32   0.42 
gi|13376335 hypothetical protein LOC79946 [Homo sapiens]               32   0.42 
gi|157168329 formin 1 [Homo sapiens]                                   32   0.55 
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]      32   0.55 
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]     32   0.55 
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor...    32   0.55 
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor...    32   0.55 
gi|4505463 contactin associated protein 1 precursor [Homo sapiens]     32   0.55 
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             31   0.72 
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo...    31   0.72 
gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo ...    31   0.72 
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo...    31   0.72 
gi|89886484 XK, Kell blood group complex subunit-related family,...    31   0.72 
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    31   0.72 
gi|41350201 epsin 1 isoform c [Homo sapiens]                           31   0.72 

>gi|218563700 ChaC, cation transport regulator-like 1 isoform b
           [Homo sapiens]
          Length = 219

 Score =  465 bits (1197), Expect = e-131
 Identities = 219/219 (100%), Positives = 219/219 (100%)

Query: 1   MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60
           MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT
Sbjct: 1   MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60

Query: 61  PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120
           PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP
Sbjct: 61  PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120

Query: 121 GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA 180
           GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA
Sbjct: 121 GRVVTLLEDHEGCTWGVAYQVQGEQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLA 180

Query: 181 DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV 219
           DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV
Sbjct: 181 DFMQLCGPQAQDEHLAAIVDAVGTMLPCFCPTEQALALV 219


>gi|218563698 ChaC, cation transport regulator-like 1 isoform a
           [Homo sapiens]
          Length = 264

 Score =  444 bits (1141), Expect = e-125
 Identities = 219/264 (82%), Positives = 219/264 (82%), Gaps = 45/264 (17%)

Query: 1   MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60
           MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT
Sbjct: 1   MGGAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT 60

Query: 61  PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120
           PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP
Sbjct: 61  PSAQFPRNDGDPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMP 120

Query: 121 GRVVTLLEDHEGCTWGVAYQVQGE------------------------------------ 144
           GRVVTLLEDHEGCTWGVAYQVQGE                                    
Sbjct: 121 GRVVTLLEDHEGCTWGVAYQVQGEQVSKALKYLNVREAVLGGYDTKEVTFYPQDAPDQPL 180

Query: 145 ---------QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 195
                    QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL
Sbjct: 181 KALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHL 240

Query: 196 AAIVDAVGTMLPCFCPTEQALALV 219
           AAIVDAVGTMLPCFCPTEQALALV
Sbjct: 241 AAIVDAVGTMLPCFCPTEQALALV 264


>gi|56790287 ChaC, cation transport regulator-like 2 [Homo sapiens]
          Length = 184

 Score =  131 bits (329), Expect = 5e-31
 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 43/167 (25%)

Query: 75  LWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCT 134
           +W+FGYGSL+W+ DF Y D  VG++  YSRRFWQG T HRG    PGRVVTL+ED  GC 
Sbjct: 1   MWVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCV 60

Query: 135 WGVAYQVQ-GEQ------------------------------------------NPGYLG 151
           WGVAY++  G++                                          NP YLG
Sbjct: 61  WGVAYRLPVGKEEEVKAYLDFREKGGYRTTTVIFYPKDPTTKPFSVLLYIGTCDNPDYLG 120

Query: 152 PAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLAAI 198
           PAP E IA QI    G SG N EYL  LA+ ++   P+  DEHL A+
Sbjct: 121 PAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFAL 167


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 10  SGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQFPRN 68
           SGA PG   R+         P++PPGP        Q    P T PPT+Q P PS   P  
Sbjct: 578 SGAPPGGQQRQG-------PPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630

Query: 69  DGDPQ 73
              PQ
Sbjct: 631 RPKPQ 635



 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 35  GPIPVPGTM---KQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73
           G  P PG +   +Q S  P  PP  Q P P    P+    PQ
Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQ 475


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 10  SGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQFPRN 68
           SGA PG   R+         P++PPGP        Q    P T PPT+Q P PS   P  
Sbjct: 578 SGAPPGGQQRQG-------PPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAG 630

Query: 69  DGDPQ 73
              PQ
Sbjct: 631 RPKPQ 635



 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)

Query: 35  GPIPVPGTM---KQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73
           G  P PG +   +Q S  P  PP  Q P P    P+    PQ
Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQ 475


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 14  PGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESA-----APNTPPTSQSPTPSAQFPRN 68
           P V  R   RA + +  RRPP P P P T+   SA      P  PP+S  P      P  
Sbjct: 625 PIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPAPPLSPAL 684

Query: 69  DGDPQALWIFGYGSLVWRP 87
            G P+      YGSL   P
Sbjct: 685 SGLPRP--ASPYGSLRRHP 701



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 12/48 (25%)

Query: 2    GGAQLELPS--------GARPGVCVRRSFRAHAGDQPRRPPGPIPVPG 41
            G A LE P+        G +PG        +   D PRRPP P P+PG
Sbjct: 2402 GDADLEKPTAIAYRMKGGGQPG----GGSSSGTEDTPRRPPEPKPIPG 2445


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 3  GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62
          G + EL +GA P V  R          P   P P P P +       P+TPP  ++ T S
Sbjct: 4  GPRAELGAGAPPAVVARTP--PEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSS 61

Query: 63 AQFPRNDGDP 72
           Q P     P
Sbjct: 62 KQLPLEPESP 71



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 29  QPRRPPGPI-PVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQ 73
           +P  P G + P P   ++ES  P++   S+ PTP A  PR+   P+
Sbjct: 67  EPESPSGQVGPRPAPPQEES--PSSEAKSRGPTPPAMGPRDARPPR 110


>gi|47132519 Ras association and pleckstrin homology domains 1
           isoform 1 [Homo sapiens]
          Length = 1250

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 6/43 (13%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS------AQFP 66
           P  PP P+P P   KQ+S     PP+  SP PS      +QFP
Sbjct: 828 PPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFP 870



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 9/32 (28%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTP 61
           P  PP P+P P         P  PP + SPTP
Sbjct: 928 PPPPPSPVPAP---------PPPPPPTASPTP 950


>gi|45827729 scribble isoform b [Homo sapiens]
          Length = 1630

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 3    GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62
            G+   +PSGA  G  +  S  + +G QP  PP P  +P  +KQ   A    PTS  P  +
Sbjct: 1278 GSVQRVPSGAAGGK-MAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDA 1336

Query: 63   AQFPRNDG 70
               P   G
Sbjct: 1337 PAQPPTPG 1344


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 3    GAQLELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPS 62
            G+   +PSGA  G  +  S  + +G QP  PP P  +P  +KQ   A    PTS  P  +
Sbjct: 1278 GSVQRVPSGAAGGK-MAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDA 1336

Query: 63   AQFPRNDG 70
               P   G
Sbjct: 1337 PAQPPTPG 1344


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 30   PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDP 72
            P  P G   +P T       P TP + + PTP A  P + G P
Sbjct: 1340 PPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP 1382



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 27   GDQPRRPP--GPIPVPGTMKQESAAPNTPPTSQSPTPSAQFP 66
            G     PP   P P   T      +P TPP   +PTP A  P
Sbjct: 1299 GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTP 1340


>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
           sapiens]
          Length = 425

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 14/74 (18%)

Query: 2   GGAQLELPSGARPG-VCVRRSFRAHAGDQ-------PRRPPGPIP------VPGTMKQES 47
           GGA  E   G   G + +  +F   AG         P  PP P P       PGT+ +E+
Sbjct: 351 GGAGAERDRGGASGFLTLHNAFPKEAGGGVTVTVTGPPAPPAPAPPAPSAPAPGTLAKEA 410

Query: 48  AAPNTPPTSQSPTP 61
           AA NT   ++  TP
Sbjct: 411 AASNTNTLNRKTTP 424


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 27  GDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQ-----FPRNDGDP 72
           G  P RPPGP+  P T+      P  PP +  P P         P N G P
Sbjct: 321 GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP 371



 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 3/51 (5%)

Query: 27  GDQPRRPP---GPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQA 74
           G  P  PP   GP P PG        P  PP + +P P    P     P A
Sbjct: 304 GPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPA 354


>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
          Length = 711

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 21  SFRAHAGDQPRRP-PGPIPVPGTMKQESAAPNTPPTSQS 58
           ++ +H   QP  P PGP P P     +   P  PPT QS
Sbjct: 578 AYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQS 616


>gi|148298722 zinc finger protein 185 [Homo sapiens]
          Length = 689

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 28  DQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRND 69
           D+P  P G    P    Q+ A P+TP    SP+ S QF R +
Sbjct: 489 DRPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVRRE 530



 Score = 30.4 bits (67), Expect = 1.2
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)

Query: 3   GAQLELPSGARPGVCVRRSFRAHAGDQPR-RPPGPIPVPGTMKQESAAPNTPPTSQSPTP 61
           G  +ELPSG       R +  + AG+ P+ RPP      G + +      T P   S  P
Sbjct: 50  GRTIELPSGRS-----RATSFSSAGEVPKPRPPSTRAPTGYIIR---GVFTKPIDSSSQP 101

Query: 62  SAQFPRNDGDPQA 74
             QFP+ +G P++
Sbjct: 102 QQQFPKANGTPKS 114



 Score = 28.1 bits (61), Expect = 6.1
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 28  DQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRND 69
           ++P  P G    P    Q+ A P+TP    SP+ S Q  R +
Sbjct: 423 ERPGAPRGGQGDPAVPAQQPADPSTPERQSSPSGSEQLVRRE 464


>gi|139394604 bromo adjacent homology domain containing 1 [Homo
           sapiens]
          Length = 780

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 6   LELPSGARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQF 65
           LE P G RP + +    +A    +P RP    P P   KQE   P+ P    SP P    
Sbjct: 304 LESPLGLRPHLPLLMGGQAALKPEPGRPGEESPAP---KQELHQPSFPTPQLSPLP---M 357

Query: 66  PRNDGDPQALWI 77
           P N  D   L +
Sbjct: 358 PGNPADYNGLCV 369


>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
          Length = 257

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 12/58 (20%)

Query: 10  SGARPGVCVRRSFRAHAG----------DQPRRPPGPIPVPGTMKQESAAPNTPPTSQ 57
           S A PG C+R S R H             +PRRP GP   P    +  A P  PP S+
Sbjct: 86  SAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRP--TPRPCAGPAPPPASR 141


>gi|157168329 formin 1 [Homo sapiens]
          Length = 1196

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDP 72
           P  PP P P P      SA P  PP    P P++  P N G P
Sbjct: 678 PPLPPPPPPPPPLPPPSSAGP-PPPPPPPPLPNSPAPPNPGGP 719


>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
          Length = 205

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 19  RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSP---TPSAQFPRNDGDPQAL 75
           +R +   AGD    PPG  P PG    +      P  S+ P   T   Q P   G     
Sbjct: 25  QRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGP 84

Query: 76  WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQ-GDTFHRGSDKMPGRVVTLLED--HEG 132
            +     +V         +   F R Y R F +     H       GR  T++E+   +G
Sbjct: 85  ALSPVPPVV---HLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141

Query: 133 CTWG 136
             WG
Sbjct: 142 VNWG 145


>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
          Length = 239

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 19  RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSP---TPSAQFPRNDGDPQAL 75
           +R +   AGD    PPG  P PG    +      P  S+ P   T   Q P   G     
Sbjct: 25  QRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGP 84

Query: 76  WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQ-GDTFHRGSDKMPGRVVTLLED--HEG 132
            +     +V         +   F R Y R F +     H       GR  T++E+   +G
Sbjct: 85  ALSPVPPVV---HLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG 141

Query: 133 CTWG 136
             WG
Sbjct: 142 VNWG 145


>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
           preproprotein [Homo sapiens]
          Length = 863

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 9   PSGARPGVCVRRSFRAHAGDQPRRPPGPIPV-PGTMKQESAAPNTPPTSQSPTPS 62
           PS   P   V +  +A   D+P  P  P+P  P     +S  P  PP  + P P+
Sbjct: 770 PSRPLPPDPVSKRLQAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPA 824


>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
           preproprotein [Homo sapiens]
          Length = 862

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 9   PSGARPGVCVRRSFRAHAGDQPRRPPGPIPV-PGTMKQESAAPNTPPTSQSPTPS 62
           PS   P   V +  +A   D+P  P  P+P  P     +S  P  PP  + P P+
Sbjct: 769 PSRPLPPDPVSKRLQAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPA 823


>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
          Length = 1384

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 24   AHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTS---QSPTPS-AQFPRNDGDPQAL 75
            AH      +PP P   P  +   +AAPN  P S    +PTP+ A  PR+   PQ L
Sbjct: 1323 AHEYHPGSKPPLPTSGPAQVPTPTAAPNQAPASAPAPAPTPAPAPGPRDQNLPQIL 1378


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 34   PGPIPVPGTMKQESAAPNTPP--TSQSPTPSAQFPRNDGDP 72
            P P P+P   K+ ++ P+TP   TS SPT S Q P +D  P
Sbjct: 1086 PSPTPLPTLPKELTSDPSTPSEVTSLSPT-SEQVPESDTTP 1125


>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDG 70
           P  PP  +P P      +AAP+T  +    TP A  P  DG
Sbjct: 289 PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329


>gi|239749704 PREDICTED: hypothetical protein XP_002347124 [Homo
          sapiens]
          Length = 80

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 11 GARPGVCVRRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRN 68
          G RP     R+ R H      R P   P+P T    + AP   P  ++ TP    PRN
Sbjct: 28 GERPPPASARTLRTHL-----RLPAGAPLPSTPPVSNPAPPPRPIPRAATPLTPRPRN 80


>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
           sapiens]
          Length = 1059

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDG 70
           P  PP  +P P      +AAP+T  +    TP A  P  DG
Sbjct: 289 PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADG 329


>gi|89886484 XK, Kell blood group complex subunit-related family,
           member 6 isoform b [Homo sapiens]
          Length = 641

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 9/59 (15%)

Query: 19  RRSFRAHAGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFPRNDGDPQALWI 77
           RRS  A  GDQP +PP     PG  +Q    P TP  ++   P  Q  R   D   LWI
Sbjct: 83  RRSAAADGGDQPLQPPA---APGAGRQ----PPTPSAARPEPPPPQVERPWLD--CLWI 132


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 30  PRRPPGPIPVPGTMKQESAAPNT-PPTSQSPTPSAQ 64
           P  PPGP+P  G+M      P+  P  S  P PSA+
Sbjct: 664 PFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSAR 699



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 33  PPGPIPVPGTMKQESAAPNTPPTSQSPTPSAQFP 66
           PP P P P        AP  PPT+  P P+ + P
Sbjct: 796 PPLPPPPPSGATPPPIAPTGPPTASPPVPAKEEP 829


>gi|41350201 epsin 1 isoform c [Homo sapiens]
          Length = 550

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 26  AGDQPRRPPGPIPVPGTMKQESAAPNTPPTSQSPT---PSAQFPRNDGDPQALWIFGYGS 82
           AG+ P R PG   + G     + A  +PP + +PT   P+ + P +   P A  +    S
Sbjct: 402 AGEVPARSPGAFDMSGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAA-LVDLDS 460

Query: 83  LVWRP 87
           LV RP
Sbjct: 461 LVSRP 465


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,261,390
Number of Sequences: 37866
Number of extensions: 663580
Number of successful extensions: 5580
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 4921
Number of HSP's gapped (non-prelim): 784
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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