Guide to the Human Genome
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Name: CACNG8 Sequence: fasta or formatted (425aa) NCBI GI: 24586686
Description:

voltage-dependent calcium channel gamma-8 subunit

Referenced in:

Calcium and TRP Cation Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         49           3
 C cysteine            1.6          7           2
 D aspartate           3.3         14           2
 E glutamate           4.2         18           2
 F phenylalanine       3.1         13           1
 G glycine            17.2         73           9
 H histidine           1.6          7           1
 I isoleucine          4.9         21           2
 K lysine              3.8         16           2
 L leucine             8.2         35           4
 M methionine          0.7          3           1
 N asparagine          3.1         13           1
 P proline             6.1         26           2
 Q glutamine           0.5          2           1
 R arginine            6.4         27           3
 S serine              9.2         39           3
 T threonine           5.2         22           2
 V valine              5.2         22           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage-dependent calcium channel gamma-8 subunit [H... 
CACNG4                0.422   voltage-dependent calcium channel gamma-4 subunit [Ho...
CACNG2                0.378   voltage-dependent calcium channel gamma-2 subunit [Ho...
CACNG3                0.363   voltage-dependent calcium channel gamma-3 subunit [Ho...
CACNG5                0.111   voltage-dependent calcium channel gamma-5 subunit is...
CACNG5                0.101   voltage-dependent calcium channel gamma-5 subunit iso...
CACNG7                0.095   voltage-dependent calcium channel gamma-7 subunit [H...
KRT9                  0.048   keratin 9 
KRT2                  0.047   keratin 2 
KRT1                  0.044   keratin 1 
DACH1                 0.044   dachshund homolog 1 isoform b 
DACH1                 0.044   dachshund homolog 1 isoform a 
DACH1                 0.044   dachshund homolog 1 isoform c 
TAF4                  0.044   TBP-associated factor 4 
IRS4                  0.042   insulin receptor substrate 4 
SOX4                  0.041   SRY (sex determining region Y)-box 4 
LOR                   0.041   loricrin 
ZIC2                  0.039   zinc finger protein of the cerebellum 2 
RING1                 0.039   ring finger protein 1 
TMEM114               0.038   PREDICTED: transmembrane protein 114 
TMEM114               0.038   transmembrane protein 114 
MAF                   0.038   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.038   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.038   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
KRT10                 0.037   keratin 10 
TMEM114               0.037   PREDICTED: transmembrane protein 114, partial [Homo...
YEATS2                0.037   YEATS domain containing 2 
SIX3                  0.036   sine oculis homeobox homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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